RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ZNF428Q96B54 188 aa15.64■□□□□ 0.09
SMAD1-215ENST00000515385 ERCC6Q03468 1493 aa15.64■□□□□ 0.09
SMAD1-215ENST00000515385 USP32Q8NFA0 1604 aa15.63■□□□□ 0.09
SMAD1-215ENST00000515385 BRPF1P55201 1214 aaPredicted RBP15.63■□□□□ 0.09
SMAD1-215ENST00000515385 MED14O60244 1454 aa15.63■□□□□ 0.09
SMAD1-215ENST00000515385 CHAF1AQ13111 956 aaPredicted RBP15.63■□□□□ 0.09
SMAD1-215ENST00000515385 NSD3Q9BZ95 1437 aa15.62■□□□□ 0.09
SMAD1-215ENST00000515385 UHRF1BP1LA0JNW5 1464 aa15.62■□□□□ 0.09
SMAD1-215ENST00000515385 TPM3P06753 285 aa15.62■□□□□ 0.09
SMAD1-215ENST00000515385 ANKRD7Q92527 254 aa15.62■□□□□ 0.09
SMAD1-215ENST00000515385 BCL2L12Q9HB09 334 aa15.62■□□□□ 0.09
SMAD1-215ENST00000515385 CDC42BPBQ9Y5S2 1711 aa15.61■□□□□ 0.09
SMAD1-215ENST00000515385 PTPRTO14522 1441 aa15.61■□□□□ 0.09
SMAD1-215ENST00000515385 GABPB1Q06547 395 aaPredicted RBP15.61■□□□□ 0.09
SMAD1-215ENST00000515385 USP26Q9BXU7 913 aa15.61■□□□□ 0.09
SMAD1-215ENST00000515385 OGFRQ9NZT2 677 aa15.61■□□□□ 0.09
SMAD1-215ENST00000515385 ZDHHC9Q9Y397 364 aa15.61■□□□□ 0.09
SMAD1-215ENST00000515385 MYO3AQ8NEV4 1616 aa15.6■□□□□ 0.09
SMAD1-215ENST00000515385 MTHFSP49914 203 aa15.6■□□□□ 0.09
SMAD1-215ENST00000515385 TSR2Q969E8 191 aaKnown RBP15.6■□□□□ 0.09
SMAD1-215ENST00000515385 PPIP5K1Q6PFW1 1433 aa15.6■□□□□ 0.09
SMAD1-215ENST00000515385 SYCP1Q15431 976 aa15.59■□□□□ 0.09
SMAD1-215ENST00000515385 INTS3Q68E01 1043 aaKnown RBP15.59■□□□□ 0.09
SMAD1-215ENST00000515385 RNF214Q8ND24 703 aa15.59■□□□□ 0.09
SMAD1-215ENST00000515385 NSD2O96028 1365 aa15.59■□□□□ 0.09
SMAD1-215ENST00000515385 SYCP2Q9BX26 1530 aa15.59■□□□□ 0.09
SMAD1-215ENST00000515385 PKP1Q13835 747 aa15.59■□□□□ 0.09
SMAD1-215ENST00000515385 ZNF830Q96NB3 372 aaPredicted RBP15.59■□□□□ 0.09
SMAD1-215ENST00000515385 U2AF1L5P0DN76 240 aaPredicted RBP15.58■□□□□ 0.09
SMAD1-215ENST00000515385 U2AF1Q01081 240 aaKnown RBP eCLIP15.58■□□□□ 0.09
SMAD1-215ENST00000515385 CASC1Q6TDU7 716 aa15.58■□□□□ 0.09
SMAD1-215ENST00000515385 ARHGAP45Q92619 1136 aa15.58■□□□□ 0.09
SMAD1-215ENST00000515385 MYOM2P54296 1465 aa15.58■□□□□ 0.08
SMAD1-215ENST00000515385 PIK3R4Q99570 1358 aa15.58■□□□□ 0.08
SMAD1-215ENST00000515385 CTIFO43310 598 aaKnown RBP15.58■□□□□ 0.08
SMAD1-215ENST00000515385 MCM2P49736 904 aa15.58■□□□□ 0.08
SMAD1-215ENST00000515385 ZBTB7BO15156 539 aaPredicted RBP15.57■□□□□ 0.08
SMAD1-215ENST00000515385 TRAPPC8Q9Y2L5 1435 aa15.57■□□□□ 0.08
SMAD1-215ENST00000515385 ANKRD36BQ8N2N9 1353 aa15.57■□□□□ 0.08
SMAD1-215ENST00000515385 TMPOP42166 694 aaKnown RBP15.56■□□□□ 0.08
SMAD1-215ENST00000515385 ZNF771Q7L3S4 317 aaPredicted RBP15.55■□□□□ 0.08
SMAD1-215ENST00000515385 ZGPATQ8N5A5 531 aaKnown RBP15.55■□□□□ 0.08
SMAD1-215ENST00000515385 TSC1Q92574 1164 aa15.55■□□□□ 0.08
SMAD1-215ENST00000515385 ZFP91Q96JP5 570 aaPredicted RBP15.55■□□□□ 0.08
SMAD1-215ENST00000515385 NSFL1CQ9UNZ2 370 aaKnown RBP15.55■□□□□ 0.08
SMAD1-215ENST00000515385 PPRC1Q5VV67 1664 aaKnown RBP15.55■□□□□ 0.08
SMAD1-215ENST00000515385 BRD1O95696 1058 aa15.55■□□□□ 0.08
SMAD1-215ENST00000515385 TRIM35Q9UPQ4 493 aa15.55■□□□□ 0.08
SMAD1-215ENST00000515385 AK9Q5TCS8 1911 aa15.54■□□□□ 0.08
SMAD1-215ENST00000515385 CCDC66A2RUB6 948 aa15.54■□□□□ 0.08
SMAD1-215ENST00000515385 REC8O95072 547 aa15.54■□□□□ 0.08
SMAD1-215ENST00000515385 TTC22Q5TAA0 569 aa15.54■□□□□ 0.08
SMAD1-215ENST00000515385 SPDYE4A6NLX3 237 aa15.53■□□□□ 0.08
SMAD1-215ENST00000515385 GSPT1P15170 499 aaKnown RBP15.53■□□□□ 0.08
SMAD1-215ENST00000515385 FAM193AP78312 1265 aa15.53■□□□□ 0.08
SMAD1-215ENST00000515385 JARID2Q92833 1246 aaPredicted RBP15.53■□□□□ 0.08
SMAD1-215ENST00000515385 PLEKHF1Q96S99 279 aa15.53■□□□□ 0.08
SMAD1-215ENST00000515385 DNAJC5Q9H3Z4 198 aa15.53■□□□□ 0.08
SMAD1-215ENST00000515385 MRC2Q9UBG0 1479 aa15.53■□□□□ 0.08
SMAD1-215ENST00000515385 MAP3K4Q9Y6R4 1608 aa15.53■□□□□ 0.08
SMAD1-215ENST00000515385 ADCY5O95622 1261 aa15.53■□□□□ 0.08
SMAD1-215ENST00000515385 PLEKHM2Q8IWE5 1019 aa15.53■□□□□ 0.08
SMAD1-215ENST00000515385 PUS7Q96PZ0 661 aaKnown RBP15.53■□□□□ 0.08
SMAD1-215ENST00000515385 CDK11BP21127 795 aaKnown RBP15.52■□□□□ 0.08
SMAD1-215ENST00000515385 SLC20A2Q08357 652 aa15.52■□□□□ 0.08
SMAD1-215ENST00000515385 KIAA1524Q8TCG1 905 aa15.52■□□□□ 0.08
SMAD1-215ENST00000515385 INTS4Q96HW7 963 aaKnown RBP15.52■□□□□ 0.08
SMAD1-215ENST00000515385 JPH4Q96JJ6 628 aa15.52■□□□□ 0.08
SMAD1-215ENST00000515385 PTCH1Q13635 1447 aa15.52■□□□□ 0.08
SMAD1-215ENST00000515385 CD109Q6YHK3 1445 aa15.52■□□□□ 0.08
SMAD1-215ENST00000515385 RIOK3O14730 519 aaKnown RBP15.52■□□□□ 0.07
SMAD1-215ENST00000515385 U2AF2P26368 475 aaKnown RBP eCLIP15.52■□□□□ 0.074e-6■■■■■ 27.7
SMAD1-215ENST00000515385 KIF24Q5T7B8 1368 aa15.51■□□□□ 0.07
SMAD1-215ENST00000515385 ARHGAP5Q13017 1502 aa15.51■□□□□ 0.07
SMAD1-215ENST00000515385 GOLGA6L6A8MZA4 724 aa15.51■□□□□ 0.07
SMAD1-215ENST00000515385 CCDC183Q5T5S1 534 aa15.51■□□□□ 0.07
SMAD1-215ENST00000515385 TTC12Q9H892 705 aaPredicted RBP15.51■□□□□ 0.07
SMAD1-215ENST00000515385 CUL4AQ13619 759 aa15.5■□□□□ 0.07
SMAD1-215ENST00000515385 CGNQ9P2M7 1197 aaKnown RBP15.5■□□□□ 0.07
SMAD1-215ENST00000515385 USP25Q9UHP3 1055 aa15.5■□□□□ 0.07
SMAD1-215ENST00000515385 KDM4AO75164 1064 aa15.5■□□□□ 0.07
SMAD1-215ENST00000515385 CFAP70Q5T0N1 1121 aa15.5■□□□□ 0.07
SMAD1-215ENST00000515385 CREBRFQ8IUR6 639 aa15.5■□□□□ 0.07
SMAD1-215ENST00000515385 ABCA6Q8N139 1617 aa15.5■□□□□ 0.07
SMAD1-215ENST00000515385 INO80Q9ULG1 1556 aaPredicted RBP15.49■□□□□ 0.07
SMAD1-215ENST00000515385 TMEM87AQ8NBN3 555 aa15.49■□□□□ 0.07
SMAD1-215ENST00000515385 SIRT2Q8IXJ6 389 aa15.48■□□□□ 0.07
SMAD1-215ENST00000515385 SETBP1Q9Y6X0 1596 aa15.48■□□□□ 0.07
SMAD1-215ENST00000515385 DCTPP1Q9H773 170 aa15.48■□□□□ 0.07
SMAD1-215ENST00000515385 BCCIPQ9P287 314 aaKnown RBP eCLIP15.47■□□□□ 0.07
SMAD1-215ENST00000515385 CTNNA3Q9UI47 895 aa15.47■□□□□ 0.07
SMAD1-215ENST00000515385 DDX41Q9UJV9 622 aaKnown RBP15.47■□□□□ 0.07
SMAD1-215ENST00000515385 MORC2Q9Y6X9 1032 aaPredicted RBP15.47■□□□□ 0.07
SMAD1-215ENST00000515385 ATAD2Q6PL18 1390 aa15.47■□□□□ 0.07
SMAD1-215ENST00000515385 ABCC4O15439 1325 aa15.47■□□□□ 0.07
SMAD1-215ENST00000515385 ERC2O15083 957 aa15.47■□□□□ 0.07
SMAD1-215ENST00000515385 TMX3Q96JJ7 454 aa15.47■□□□□ 0.07
SMAD1-215ENST00000515385 DNAJC2Q99543 621 aaKnown RBP15.47■□□□□ 0.07
SMAD1-215ENST00000515385 NRXN1Q9ULB1 1477 aa15.46■□□□□ 0.07
SMAD1-215ENST00000515385 MX1P20591 662 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms