RNA–Protein interactions for RNA: ENST00000515298.5

PAPD4-216, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-216ENST00000515298 AAASQ9NRG9 546 aa9.39□□□□□ -0.91
PAPD4-216ENST00000515298 PCDHB9Q9Y5E1 797 aa9.39□□□□□ -0.91
PAPD4-216ENST00000515298 ST8SIA5O15466 376 aa9.38□□□□□ -0.91
PAPD4-216ENST00000515298 NBPF20Q3BBV1 942 aa9.38□□□□□ -0.91
PAPD4-216ENST00000515298 KLF16Q9BXK1 252 aaPredicted RBP9.38□□□□□ -0.91
PAPD4-216ENST00000515298 RAD21O60216 631 aa9.37□□□□□ -0.91
PAPD4-216ENST00000515298 ZNF330Q9Y3S2 320 aaPredicted RBP9.37□□□□□ -0.91
PAPD4-216ENST00000515298 ESPNB1AK53 854 aa9.36□□□□□ -0.91
PAPD4-216ENST00000515298 AXIN1O15169 862 aa9.36□□□□□ -0.91
PAPD4-216ENST00000515298 MCCD1P59942 119 aaPredicted RBP9.36□□□□□ -0.91
PAPD4-216ENST00000515298 VAC14Q08AM6 782 aa9.36□□□□□ -0.91
PAPD4-216ENST00000515298 WASHC4Q2M389 1173 aa9.36□□□□□ -0.91
PAPD4-216ENST00000515298 INTS6LQ5JSJ4 861 aaKnown RBP9.36□□□□□ -0.91
PAPD4-216ENST00000515298 TIMP2P16035 220 aa9.35□□□□□ -0.91
PAPD4-216ENST00000515298 CCDC116Q8IYX3 515 aa9.35□□□□□ -0.91
PAPD4-216ENST00000515298 CAPN5O15484 640 aaPredicted RBP9.34□□□□□ -0.91
PAPD4-216ENST00000515298 WDR4P57081 412 aaKnown RBP9.34□□□□□ -0.91
PAPD4-216ENST00000515298 ZNF592Q92610 1267 aa9.34□□□□□ -0.91
PAPD4-216ENST00000515298 CLUAP1Q96AJ1 413 aa9.34□□□□□ -0.91
PAPD4-216ENST00000515298 GIGYF1O75420 1035 aaPredicted RBP9.33□□□□□ -0.92
PAPD4-216ENST00000515298 EIF4G2P78344 907 aaKnown RBP eCLIP9.33□□□□□ -0.92
PAPD4-216ENST00000515298 ITPKCQ96DU7 683 aa9.33□□□□□ -0.92
PAPD4-216ENST00000515298 DACH1Q9UI36 760 aa9.33□□□□□ -0.92
PAPD4-216ENST00000515298 GTF3C3Q9Y5Q9 886 aa9.33□□□□□ -0.92
PAPD4-216ENST00000515298 ZIC2O95409 532 aaPredicted RBP9.32□□□□□ -0.92
PAPD4-216ENST00000515298 DHX9Q08211 1270 aaKnown RBP9.32□□□□□ -0.92
PAPD4-216ENST00000515298 PPP1R26Q5T8A7 1209 aaPredicted RBP9.32□□□□□ -0.92
PAPD4-216ENST00000515298 SEPT12Q8IYM1 358 aa9.32□□□□□ -0.92
PAPD4-216ENST00000515298 ZFAND3Q9H8U3 227 aa9.32□□□□□ -0.92
PAPD4-216ENST00000515298 EMILIN1Q9Y6C2 1016 aa9.32□□□□□ -0.92
PAPD4-216ENST00000515298 WWC1Q8IX03 1113 aa9.31□□□□□ -0.92
PAPD4-216ENST00000515298 CEP126Q9P2H0 1117 aa9.31□□□□□ -0.92
PAPD4-216ENST00000515298 RAB15P59190 212 aa9.3□□□□□ -0.92
PAPD4-216ENST00000515298 FNBP4Q8N3X1 1017 aaPredicted RBP9.3□□□□□ -0.92
PAPD4-216ENST00000515298 A6NJR5 290 aa9.29□□□□□ -0.92
PAPD4-216ENST00000515298 ERVH48-1M5A8F1 160 aa9.29□□□□□ -0.92
PAPD4-216ENST00000515298 ATP13A2Q9NQ11 1180 aa9.29□□□□□ -0.92
PAPD4-216ENST00000515298 PGPEP1Q9NXJ5 209 aa9.29□□□□□ -0.92
PAPD4-216ENST00000515298 SOX11P35716 441 aa9.28□□□□□ -0.92
PAPD4-216ENST00000515298 RNF20Q5VTR2 975 aa9.28□□□□□ -0.92
PAPD4-216ENST00000515298 PROSER2Q86WR7 435 aaPredicted RBP9.28□□□□□ -0.92
PAPD4-216ENST00000515298 TMPRSS4Q9NRS4 437 aa9.28□□□□□ -0.92
PAPD4-216ENST00000515298 TRIM46Q7Z4K8 759 aa9.27□□□□□ -0.93
PAPD4-216ENST00000515298 CCDC125Q86Z20 511 aa9.27□□□□□ -0.93
PAPD4-216ENST00000515298 POM121CA8CG34 1229 aa9.26□□□□□ -0.93
PAPD4-216ENST00000515298 BMP1P13497 986 aa9.26□□□□□ -0.93
PAPD4-216ENST00000515298 SEMA3FQ13275 785 aa9.26□□□□□ -0.93
PAPD4-216ENST00000515298 PHTF2Q8N3S3 785 aa9.26□□□□□ -0.93
PAPD4-216ENST00000515298 ZNF784Q8NCA9 323 aaPredicted RBP9.26□□□□□ -0.93
PAPD4-216ENST00000515298 ALG2Q9H553 416 aa9.26□□□□□ -0.93
PAPD4-216ENST00000515298 POTECB2RU33 542 aa9.25□□□□□ -0.93
PAPD4-216ENST00000515298 LILRA1O75019 489 aa9.25□□□□□ -0.93
PAPD4-216ENST00000515298 CBLBQ13191 982 aa9.25□□□□□ -0.93
PAPD4-216ENST00000515298 Q6ZVU0 165 aa9.25□□□□□ -0.93
PAPD4-216ENST00000515298 MEIOBQ8N635 442 aa9.25□□□□□ -0.93
PAPD4-216ENST00000515298 GMPR2Q9P2T1 348 aaKnown RBP9.25□□□□□ -0.93
PAPD4-216ENST00000515298 MRPL14Q6P1L8 145 aaKnown RBP9.24□□□□□ -0.93
PAPD4-216ENST00000515298 ADAMTS19Q8TE59 1207 aa9.23□□□□□ -0.93
PAPD4-216ENST00000515298 CCDC85AQ96PX6 553 aaPredicted RBP9.23□□□□□ -0.93
PAPD4-216ENST00000515298 ADD1P35611 737 aaKnown RBP9.22□□□□□ -0.93
PAPD4-216ENST00000515298 SLFNL1Q499Z3 407 aa9.22□□□□□ -0.93
PAPD4-216ENST00000515298 CYLDQ9NQC7 956 aa9.22□□□□□ -0.93
PAPD4-216ENST00000515298 CHIC2Q9UKJ5 165 aa9.22□□□□□ -0.93
PAPD4-216ENST00000515298 PCDHB11Q9Y5F2 797 aa9.22□□□□□ -0.93
PAPD4-216ENST00000515298 ERVK-9P63128 1117 aa9.21□□□□□ -0.94
PAPD4-216ENST00000515298 TSGA10IPQ3SY00 556 aa9.21□□□□□ -0.94
PAPD4-216ENST00000515298 ZNF787Q6DD87 383 aa9.21□□□□□ -0.94
PAPD4-216ENST00000515298 RNF135Q8IUD6 432 aa9.21□□□□□ -0.94
PAPD4-216ENST00000515298 LINC00528Q8N1L1 170 aa9.21□□□□□ -0.94
PAPD4-216ENST00000515298 TRIM52Q96A61 297 aa9.2□□□□□ -0.94
PAPD4-216ENST00000515298 ZFP42Q96MM3 310 aa9.2□□□□□ -0.94
PAPD4-216ENST00000515298 PURBQ96QR8 312 aaKnown RBP9.2□□□□□ -0.94
PAPD4-216ENST00000515298 TSEN34Q9BSV6 310 aaKnown RBP9.2□□□□□ -0.94
PAPD4-216ENST00000515298 CDCA7Q9BWT1 371 aaPredicted RBP9.2□□□□□ -0.94
PAPD4-216ENST00000515298 SENP2Q9HC62 589 aa9.2□□□□□ -0.94
PAPD4-216ENST00000515298 TRAK2O60296 914 aa9.19□□□□□ -0.94
PAPD4-216ENST00000515298 SCTRP47872 440 aa9.19□□□□□ -0.94
PAPD4-216ENST00000515298 SCARF1Q14162 830 aa9.19□□□□□ -0.94
PAPD4-216ENST00000515298 HDGFL1Q5TGJ6 251 aa9.19□□□□□ -0.94
PAPD4-216ENST00000515298 CC2D2BQ6DHV5 1058 aa9.19□□□□□ -0.94
PAPD4-216ENST00000515298 TRIM47Q96LD4 638 aa9.19□□□□□ -0.94
PAPD4-216ENST00000515298 PIK3CDO00329 1044 aa9.18□□□□□ -0.94
PAPD4-216ENST00000515298 UPP2O95045 317 aa9.18□□□□□ -0.94
PAPD4-216ENST00000515298 ADH1AP07327 375 aa9.18□□□□□ -0.94
PAPD4-216ENST00000515298 C6orf118Q5T5N4 469 aa9.18□□□□□ -0.94
PAPD4-216ENST00000515298 KDF1Q8NAX2 398 aaPredicted RBP9.18□□□□□ -0.94
PAPD4-216ENST00000515298 KIFC2Q96AC6 838 aa9.18□□□□□ -0.94
PAPD4-216ENST00000515298 AGBL1Q96MI9 1066 aa9.18□□□□□ -0.94
PAPD4-216ENST00000515298 C11orf95C9JLR9 678 aaPredicted RBP9.17□□□□□ -0.94
PAPD4-216ENST00000515298 BMP2P12643 396 aa9.17□□□□□ -0.94
PAPD4-216ENST00000515298 SNRPBP14678 240 aaKnown RBP9.17□□□□□ -0.94
PAPD4-216ENST00000515298 ZMYND15Q9H091 742 aa9.17□□□□□ -0.94
PAPD4-216ENST00000515298 DOLKQ9UPQ8 538 aa9.17□□□□□ -0.94
PAPD4-216ENST00000515298 RELBQ01201 579 aa9.16□□□□□ -0.94
PAPD4-216ENST00000515298 MAP7D1Q3KQU3 841 aa9.16□□□□□ -0.94
PAPD4-216ENST00000515298 PLPP7Q8NBV4 271 aa9.16□□□□□ -0.94
PAPD4-216ENST00000515298 GLMNQ92990 594 aa9.16□□□□□ -0.94
PAPD4-216ENST00000515298 OSBPL3Q9H4L5 887 aa9.16□□□□□ -0.94
PAPD4-216ENST00000515298 SPINT1O43278 529 aa9.15□□□□□ -0.94
PAPD4-216ENST00000515298 PTGIRP43119 386 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms