RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 OVOS2A0A0J9YW53 1432 aa14.76□□□□□ -0.05
HMGXB3-205ENST00000514469 OVOS2Q6IE36 1432 aa14.76□□□□□ -0.05
HMGXB3-205ENST00000514469 TMC1Q8TDI8 760 aa14.76□□□□□ -0.05
HMGXB3-205ENST00000514469 SLC12A5Q9H2X9 1139 aa14.76□□□□□ -0.05
HMGXB3-205ENST00000514469 ZRANB1Q9UGI0 708 aa14.76□□□□□ -0.05
HMGXB3-205ENST00000514469 WDR17Q8IZU2 1322 aa14.75□□□□□ -0.05
HMGXB3-205ENST00000514469 SLC24A1O60721 1099 aa14.75□□□□□ -0.05
HMGXB3-205ENST00000514469 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.75□□□□□ -0.05
HMGXB3-205ENST00000514469 TERF2IPQ9NYB0 399 aa14.75□□□□□ -0.05
HMGXB3-205ENST00000514469 TIMELESSQ9UNS1 1208 aa14.75□□□□□ -0.05
HMGXB3-205ENST00000514469 AXIN2Q9Y2T1 843 aa14.75□□□□□ -0.05
HMGXB3-205ENST00000514469 SRCAPQ6ZRS2 3230 aa14.75□□□□□ -0.05
HMGXB3-205ENST00000514469 BAG6P46379 1132 aa14.74□□□□□ -0.05
HMGXB3-205ENST00000514469 NME9Q86XW9 330 aa14.74□□□□□ -0.05
HMGXB3-205ENST00000514469 PEAK1Q9H792 1746 aa14.74□□□□□ -0.05
HMGXB3-205ENST00000514469 SOX12O15370 315 aa14.73□□□□□ -0.05
HMGXB3-205ENST00000514469 FAM196AQ6ZSG2 479 aa14.73□□□□□ -0.05
HMGXB3-205ENST00000514469 RGPD5Q99666 1765 aa14.73□□□□□ -0.05
HMGXB3-205ENST00000514469 LTN1O94822 1766 aa14.72□□□□□ -0.05
HMGXB3-205ENST00000514469 ANKRD36BQ8N2N9 1353 aa14.72□□□□□ -0.05
HMGXB3-205ENST00000514469 PDE3BQ13370 1112 aa14.71□□□□□ -0.05
HMGXB3-205ENST00000514469 TOM1L2Q6ZVM7 507 aa14.71□□□□□ -0.05
HMGXB3-205ENST00000514469 OVOS2A0A0G2JMS6 1433 aa14.7□□□□□ -0.06
HMGXB3-205ENST00000514469 PCGF6Q9BYE7 350 aa14.7□□□□□ -0.06
HMGXB3-205ENST00000514469 MYOM1P52179 1685 aa14.69□□□□□ -0.06
HMGXB3-205ENST00000514469 RREB1Q92766 1687 aa14.69□□□□□ -0.06
HMGXB3-205ENST00000514469 TRIM37O94972 964 aa14.69□□□□□ -0.06
HMGXB3-205ENST00000514469 TMF1P82094 1093 aa14.69□□□□□ -0.06
HMGXB3-205ENST00000514469 EN1Q05925 392 aaPredicted RBP14.69□□□□□ -0.06
HMGXB3-205ENST00000514469 CARD10Q9BWT7 1032 aa14.69□□□□□ -0.06
HMGXB3-205ENST00000514469 CCDC7Q96M83 1385 aa14.69□□□□□ -0.06
HMGXB3-205ENST00000514469 ERBB3P21860 1342 aa14.68□□□□□ -0.06
HMGXB3-205ENST00000514469 PARD3Q8TEW0 1356 aa14.68□□□□□ -0.06
HMGXB3-205ENST00000514469 CSB-PGBD3P0DP91 1061 aa14.67□□□□□ -0.06
HMGXB3-205ENST00000514469 CDCA7Q9BWT1 371 aaPredicted RBP14.67□□□□□ -0.06
HMGXB3-205ENST00000514469 BCL9O00512 1426 aa14.66□□□□□ -0.06
HMGXB3-205ENST00000514469 TNS2Q63HR2 1409 aa14.66□□□□□ -0.06
HMGXB3-205ENST00000514469 LRP5O75197 1615 aa14.66□□□□□ -0.06
HMGXB3-205ENST00000514469 C11orf95C9JLR9 678 aaPredicted RBP14.66□□□□□ -0.06
HMGXB3-205ENST00000514469 DDB1Q16531 1140 aa14.66□□□□□ -0.06
HMGXB3-205ENST00000514469 CAMKK2Q96RR4 588 aa14.66□□□□□ -0.06
HMGXB3-205ENST00000514469 NUP188Q5SRE5 1749 aa14.66□□□□□ -0.06
HMGXB3-205ENST00000514469 RGPD3A6NKT7 1758 aaPredicted RBP14.65□□□□□ -0.06
HMGXB3-205ENST00000514469 RGPD4Q7Z3J3 1758 aa14.65□□□□□ -0.06
HMGXB3-205ENST00000514469 FAM208AQ9UK61 1670 aaKnown RBP14.65□□□□□ -0.06
HMGXB3-205ENST00000514469 EZH2Q15910 746 aaKnown RBP14.65□□□□□ -0.06
HMGXB3-205ENST00000514469 APBA3O96018 575 aa14.64□□□□□ -0.07
HMGXB3-205ENST00000514469 CDCA8Q53HL2 280 aa14.64□□□□□ -0.07
HMGXB3-205ENST00000514469 ANKRD24Q8TF21 1146 aa14.63□□□□□ -0.07
HMGXB3-205ENST00000514469 COG3Q96JB2 828 aa14.63□□□□□ -0.07
HMGXB3-205ENST00000514469 SBF2Q86WG5 1849 aa14.63□□□□□ -0.07
HMGXB3-205ENST00000514469 KIF20BQ96Q89 1820 aa14.63□□□□□ -0.07
HMGXB3-205ENST00000514469 MARCH10Q8NA82 808 aaPredicted RBP14.62□□□□□ -0.07
HMGXB3-205ENST00000514469 RTL1A6NKG5 1358 aa14.61□□□□□ -0.07
HMGXB3-205ENST00000514469 PSDA5PKW4 1024 aaPredicted RBP14.61□□□□□ -0.07
HMGXB3-205ENST00000514469 IP6K1Q92551 441 aa14.61□□□□□ -0.07
HMGXB3-205ENST00000514469 MAP3K19Q56UN5 1328 aa14.61□□□□□ -0.07
HMGXB3-205ENST00000514469 FYB1O15117 783 aa14.6□□□□□ -0.07
HMGXB3-205ENST00000514469 NLRP2Q9NX02 1062 aa14.6□□□□□ -0.07
HMGXB3-205ENST00000514469 NHSQ6T4R5 1651 aa14.59□□□□□ -0.07
HMGXB3-205ENST00000514469 CCER1Q8TC90 406 aaPredicted RBP14.59□□□□□ -0.07
HMGXB3-205ENST00000514469 NSD3Q9BZ95 1437 aa14.58□□□□□ -0.07
HMGXB3-205ENST00000514469 EXOC5O00471 708 aa14.58□□□□□ -0.08
HMGXB3-205ENST00000514469 IL2RBP14784 551 aa14.58□□□□□ -0.08
HMGXB3-205ENST00000514469 HOXC9P31274 260 aa14.58□□□□□ -0.08
HMGXB3-205ENST00000514469 R3HDM1Q15032 1099 aaKnown RBP14.58□□□□□ -0.08
HMGXB3-205ENST00000514469 BCL11BQ9C0K0 894 aaPredicted RBP14.58□□□□□ -0.08
HMGXB3-205ENST00000514469 GGNBP2Q9H3C7 697 aa14.58□□□□□ -0.08
HMGXB3-205ENST00000514469 PLSCR1O15162 318 aa14.56□□□□□ -0.08
HMGXB3-205ENST00000514469 FBLN1P23142 703 aa14.56□□□□□ -0.08
HMGXB3-205ENST00000514469 PTF1AQ7RTS3 328 aa14.56□□□□□ -0.08
HMGXB3-205ENST00000514469 CARD14Q9BXL6 1004 aa14.56□□□□□ -0.08
HMGXB3-205ENST00000514469 AMPHP49418 695 aa14.55□□□□□ -0.08
HMGXB3-205ENST00000514469 RRS1Q15050 365 aaKnown RBP14.55□□□□□ -0.08
HMGXB3-205ENST00000514469 ANKRD26Q9UPS8 1709 aa14.55□□□□□ -0.08
HMGXB3-205ENST00000514469 LTV1Q96GA3 475 aaPredicted RBP14.54□□□□□ -0.08
HMGXB3-205ENST00000514469 KIF24Q5T7B8 1368 aa14.54□□□□□ -0.08
HMGXB3-205ENST00000514469 SHANK3Q9BYB0 1731 aa14.53□□□□□ -0.08
HMGXB3-205ENST00000514469 MEGF6O75095 1541 aa14.53□□□□□ -0.08
HMGXB3-205ENST00000514469 SMG6Q86US8 1419 aaKnown RBP14.53□□□□□ -0.08
HMGXB3-205ENST00000514469 FLT4P35916 1363 aa14.53□□□□□ -0.08
HMGXB3-205ENST00000514469 EIF4G2P78344 907 aaKnown RBP eCLIP14.53□□□□□ -0.085e-6■■□□□ 14.3
HMGXB3-205ENST00000514469 RGPD2P0DJD1 1756 aa14.52□□□□□ -0.08
HMGXB3-205ENST00000514469 INSRP06213 1382 aa14.52□□□□□ -0.08
HMGXB3-205ENST00000514469 HSPA5P11021 654 aaKnown RBP14.52□□□□□ -0.09
HMGXB3-205ENST00000514469 NBPF14Q5TI25 921 aa14.52□□□□□ -0.09
HMGXB3-205ENST00000514469 CGNL1Q0VF96 1302 aa14.5□□□□□ -0.09
HMGXB3-205ENST00000514469 KCNQ2O43526 872 aa14.5□□□□□ -0.09
HMGXB3-205ENST00000514469 CASZ1Q86V15 1759 aa14.5□□□□□ -0.09
HMGXB3-205ENST00000514469 PAPPAQ13219 1627 aa14.49□□□□□ -0.09
HMGXB3-205ENST00000514469 NBPF6Q5VWK0 638 aa14.49□□□□□ -0.09
HMGXB3-205ENST00000514469 PROM2Q8N271 834 aa14.49□□□□□ -0.09
HMGXB3-205ENST00000514469 ACSBG1Q96GR2 724 aa14.49□□□□□ -0.09
HMGXB3-205ENST00000514469 NBPF4Q96M43 638 aa14.49□□□□□ -0.09
HMGXB3-205ENST00000514469 ANO8Q9HCE9 1232 aaPredicted RBP14.49□□□□□ -0.09
HMGXB3-205ENST00000514469 BTAF1O14981 1849 aa14.49□□□□□ -0.09
HMGXB3-205ENST00000514469 NCAPD2Q15021 1401 aa14.49□□□□□ -0.09
HMGXB3-205ENST00000514469 HSP90AB2PQ58FF8 381 aa14.48□□□□□ -0.09
HMGXB3-205ENST00000514469 DOT1LQ8TEK3 1739 aa14.48□□□□□ -0.09
HMGXB3-205ENST00000514469 TXNRD1Q16881 649 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms