RNA–Protein interactions for RNA: ENST00000514233.1

SDHA-217, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-217ENST00000514233 CPSF1Q10570 1443 aaKnown RBP12.93□□□□□ -0.34
SDHA-217ENST00000514233 AKAP12Q02952 1782 aa12.92□□□□□ -0.34
SDHA-217ENST00000514233 TOM1L2Q6ZVM7 507 aa12.92□□□□□ -0.34
SDHA-217ENST00000514233 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
SDHA-217ENST00000514233 SIN3AQ96ST3 1273 aa12.92□□□□□ -0.34
SDHA-217ENST00000514233 BCL11BQ9C0K0 894 aaPredicted RBP12.92□□□□□ -0.34
SDHA-217ENST00000514233 AXIN2Q9Y2T1 843 aa12.92□□□□□ -0.34
SDHA-217ENST00000514233 TTC21BQ7Z4L5 1316 aa12.91□□□□□ -0.34
SDHA-217ENST00000514233 TTC21AQ8NDW8 1320 aa12.91□□□□□ -0.34
SDHA-217ENST00000514233 SBF2Q86WG5 1849 aa12.91□□□□□ -0.34
SDHA-217ENST00000514233 SPON1Q9HCB6 807 aa12.91□□□□□ -0.34
SDHA-217ENST00000514233 ABCC6O95255 1503 aa12.91□□□□□ -0.34
SDHA-217ENST00000514233 KCNQ2O43526 872 aa12.9□□□□□ -0.34
SDHA-217ENST00000514233 CARD10Q9BWT7 1032 aa12.9□□□□□ -0.34
SDHA-217ENST00000514233 NINLQ9Y2I6 1382 aa12.9□□□□□ -0.34
SDHA-217ENST00000514233 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
SDHA-217ENST00000514233 NEUROD1Q13562 356 aa12.89□□□□□ -0.35
SDHA-217ENST00000514233 MARCH10Q8NA82 808 aaPredicted RBP12.89□□□□□ -0.35
SDHA-217ENST00000514233 WNK3Q9BYP7 1800 aa12.89□□□□□ -0.35
SDHA-217ENST00000514233 ROCK2O75116 1388 aaKnown RBP12.89□□□□□ -0.35
SDHA-217ENST00000514233 NFAT5O94916 1531 aa12.88□□□□□ -0.35
SDHA-217ENST00000514233 SBNO2Q9Y2G9 1366 aa12.88□□□□□ -0.35
SDHA-217ENST00000514233 RGPD5Q99666 1765 aa12.87□□□□□ -0.35
SDHA-217ENST00000514233 PROM2Q8N271 834 aa12.87□□□□□ -0.35
SDHA-217ENST00000514233 PPP1R1BQ9UD71 204 aaPredicted RBP12.87□□□□□ -0.35
SDHA-217ENST00000514233 USP31Q70CQ4 1352 aa12.86□□□□□ -0.35
SDHA-217ENST00000514233 KTN1Q86UP2 1357 aaKnown RBP12.86□□□□□ -0.35
SDHA-217ENST00000514233 CCDC7Q96M83 1385 aa12.86□□□□□ -0.35
SDHA-217ENST00000514233 MON2Q7Z3U7 1717 aa12.86□□□□□ -0.35
SDHA-217ENST00000514233 PTF1AQ7RTS3 328 aa12.86□□□□□ -0.35
SDHA-217ENST00000514233 ANO8Q9HCE9 1232 aaPredicted RBP12.86□□□□□ -0.35
SDHA-217ENST00000514233 CASZ1Q86V15 1759 aa12.86□□□□□ -0.35
SDHA-217ENST00000514233 CSB-PGBD3P0DP91 1061 aa12.85□□□□□ -0.35
SDHA-217ENST00000514233 USP54Q70EL1 1684 aa12.85□□□□□ -0.35
SDHA-217ENST00000514233 EXOC5O00471 708 aa12.84□□□□□ -0.35
SDHA-217ENST00000514233 YY1P25490 414 aa12.84□□□□□ -0.35
SDHA-217ENST00000514233 TNS2Q63HR2 1409 aa12.84□□□□□ -0.35
SDHA-217ENST00000514233 GOLGB1Q14789 3259 aaKnown RBP12.84□□□□□ -0.35
SDHA-217ENST00000514233 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
SDHA-217ENST00000514233 TXNRD1Q16881 649 aa12.83□□□□□ -0.36
SDHA-217ENST00000514233 ERBB3P21860 1342 aa12.83□□□□□ -0.36
SDHA-217ENST00000514233 SOX12O15370 315 aa12.82□□□□□ -0.36
SDHA-217ENST00000514233 CD163L1Q9NR16 1453 aa12.82□□□□□ -0.36
SDHA-217ENST00000514233 LTN1O94822 1766 aa12.81□□□□□ -0.36
SDHA-217ENST00000514233 PDGFDQ9GZP0 370 aaPredicted RBP12.81□□□□□ -0.36
SDHA-217ENST00000514233 PTGER2P43116 358 aa12.8□□□□□ -0.36
SDHA-217ENST00000514233 SLC15A2Q16348 729 aa12.8□□□□□ -0.36
SDHA-217ENST00000514233 PUS7Q96PZ0 661 aaKnown RBP12.8□□□□□ -0.36
SDHA-217ENST00000514233 STK32BQ9NY57 414 aa12.8□□□□□ -0.36
SDHA-217ENST00000514233 NHSQ6T4R5 1651 aa12.8□□□□□ -0.36
SDHA-217ENST00000514233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.79□□□□□ -0.36
SDHA-217ENST00000514233 EDC4Q6P2E9 1401 aaKnown RBP12.79□□□□□ -0.36
SDHA-217ENST00000514233 ZBTB7AO95365 584 aa12.78□□□□□ -0.36
SDHA-217ENST00000514233 IL2RBP14784 551 aa12.78□□□□□ -0.36
SDHA-217ENST00000514233 NME9Q86XW9 330 aa12.78□□□□□ -0.36
SDHA-217ENST00000514233 CARD11Q9BXL7 1154 aa12.78□□□□□ -0.36
SDHA-217ENST00000514233 MTFR1LQ9H019 292 aa12.78□□□□□ -0.36
SDHA-217ENST00000514233 HDGFL2Q7Z4V5 671 aaPredicted RBP12.77□□□□□ -0.37
SDHA-217ENST00000514233 SGIP1Q9BQI5 828 aa12.77□□□□□ -0.37
SDHA-217ENST00000514233 NLRP2Q9NX02 1062 aa12.77□□□□□ -0.37
SDHA-217ENST00000514233 TONSLQ96HA7 1378 aa12.77□□□□□ -0.37
SDHA-217ENST00000514233 PAPPAQ13219 1627 aa12.77□□□□□ -0.37
SDHA-217ENST00000514233 MYOM1P52179 1685 aa12.77□□□□□ -0.37
SDHA-217ENST00000514233 ANKRD24Q8TF21 1146 aa12.76□□□□□ -0.37
SDHA-217ENST00000514233 SLC12A5Q9H2X9 1139 aa12.76□□□□□ -0.37
SDHA-217ENST00000514233 TERF2IPQ9NYB0 399 aa12.76□□□□□ -0.37
SDHA-217ENST00000514233 A0A1W2PP64 1363 aa12.75□□□□□ -0.37
SDHA-217ENST00000514233 TMC1Q8TDI8 760 aa12.75□□□□□ -0.37
SDHA-217ENST00000514233 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
SDHA-217ENST00000514233 MAP3K5Q99683 1374 aa12.74□□□□□ -0.37
SDHA-217ENST00000514233 IP6K1Q92551 441 aa12.74□□□□□ -0.37
SDHA-217ENST00000514233 ACSBG1Q96GR2 724 aa12.74□□□□□ -0.37
SDHA-217ENST00000514233 SYT17Q9BSW7 474 aa12.74□□□□□ -0.37
SDHA-217ENST00000514233 FHDC1Q9C0D6 1143 aaPredicted RBP12.73□□□□□ -0.37
SDHA-217ENST00000514233 BTAF1O14981 1849 aa12.73□□□□□ -0.37
SDHA-217ENST00000514233 SLC24A1O60721 1099 aa12.72□□□□□ -0.37
SDHA-217ENST00000514233 SLC27A3Q5K4L6 730 aa12.72□□□□□ -0.37
SDHA-217ENST00000514233 FAM208AQ9UK61 1670 aaKnown RBP12.72□□□□□ -0.37
SDHA-217ENST00000514233 ARXQ96QS3 562 aa12.71□□□□□ -0.37
SDHA-217ENST00000514233 TESK2Q96S53 571 aa12.71□□□□□ -0.37
SDHA-217ENST00000514233 LRRC4BQ9NT99 713 aa12.71□□□□□ -0.37
SDHA-217ENST00000514233 ZNF827Q17R98 1081 aa12.7□□□□□ -0.38
SDHA-217ENST00000514233 SLC16A10Q8TF71 515 aa12.7□□□□□ -0.38
SDHA-217ENST00000514233 AKT1S1Q96B36 256 aa12.7□□□□□ -0.38
SDHA-217ENST00000514233 KAT6BQ8WYB5 2073 aa12.69□□□□□ -0.38
SDHA-217ENST00000514233 QSER1Q2KHR3 1735 aa12.69□□□□□ -0.38
SDHA-217ENST00000514233 MAP3K19Q56UN5 1328 aa12.68□□□□□ -0.38
SDHA-217ENST00000514233 KIF20BQ96Q89 1820 aa12.68□□□□□ -0.38
SDHA-217ENST00000514233 HOXC9P31274 260 aa12.68□□□□□ -0.38
SDHA-217ENST00000514233 ZNF784Q8NCA9 323 aaPredicted RBP12.68□□□□□ -0.38
SDHA-217ENST00000514233 COG3Q96JB2 828 aa12.68□□□□□ -0.38
SDHA-217ENST00000514233 RGPD2P0DJD1 1756 aa12.68□□□□□ -0.38
SDHA-217ENST00000514233 RTL1A6NKG5 1358 aa12.68□□□□□ -0.38
SDHA-217ENST00000514233 ANKRD36BQ8N2N9 1353 aa12.68□□□□□ -0.38
SDHA-217ENST00000514233 DDX54Q8TDD1 881 aaKnown RBP12.67□□□□□ -0.38
SDHA-217ENST00000514233 COL24A1Q17RW2 1714 aa12.67□□□□□ -0.38
SDHA-217ENST00000514233 CEP350Q5VT06 3117 aa12.67□□□□□ -0.38
SDHA-217ENST00000514233 CHD4Q14839 1912 aa12.66□□□□□ -0.38
SDHA-217ENST00000514233 ST20-MTHFSA0A0A6YYL1 179 aa12.66□□□□□ -0.38
SDHA-217ENST00000514233 TRIM26Q12899 539 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms