RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 TRIM32Q13049 653 aa7.93□□□□□ -1.14
NIPBL-207ENST00000513819 NCOA4Q13772 614 aa7.93□□□□□ -1.14
NIPBL-207ENST00000513819 PPP1R18Q6NYC8 613 aa7.93□□□□□ -1.14
NIPBL-207ENST00000513819 AEBP1Q8IUX7 1158 aa7.93□□□□□ -1.14
NIPBL-207ENST00000513819 PLEKHM2Q8IWE5 1019 aa7.93□□□□□ -1.14
NIPBL-207ENST00000513819 ANKLE1Q8NAG6 615 aa7.93□□□□□ -1.14
NIPBL-207ENST00000513819 GGCXP38435 758 aa7.92□□□□□ -1.14
NIPBL-207ENST00000513819 SLC10A4Q96EP9 437 aa7.92□□□□□ -1.14
NIPBL-207ENST00000513819 C1QTNF2Q9BXJ5 285 aa7.92□□□□□ -1.14
NIPBL-207ENST00000513819 MKRN1Q9UHC7 482 aaKnown RBP7.92□□□□□ -1.14
NIPBL-207ENST00000513819 ZBTB7CA1YPR0 619 aa7.91□□□□□ -1.14
NIPBL-207ENST00000513819 CCDC85AQ96PX6 553 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-207ENST00000513819 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.91□□□□□ -1.14
NIPBL-207ENST00000513819 USTQ9Y2C2 406 aa7.91□□□□□ -1.14
NIPBL-207ENST00000513819 SKOR1P84550 965 aa7.9□□□□□ -1.14
NIPBL-207ENST00000513819 PDE4CQ08493 712 aa7.9□□□□□ -1.14
NIPBL-207ENST00000513819 TRAF7Q6Q0C0 670 aa7.9□□□□□ -1.14
NIPBL-207ENST00000513819 CHIC2Q9UKJ5 165 aa7.9□□□□□ -1.14
NIPBL-207ENST00000513819 TMEM88BA6NKF7 163 aa7.89□□□□□ -1.15
NIPBL-207ENST00000513819 MAP7D1Q3KQU3 841 aa7.89□□□□□ -1.15
NIPBL-207ENST00000513819 CRTC2Q53ET0 693 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-207ENST00000513819 KCTD17Q8N5Z5 321 aa7.89□□□□□ -1.15
NIPBL-207ENST00000513819 ZMIZ1Q9ULJ6 1067 aa7.89□□□□□ -1.15
NIPBL-207ENST00000513819 DOLKQ9UPQ8 538 aa7.89□□□□□ -1.15
NIPBL-207ENST00000513819 USP17L15C9J2P7 530 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 USP17L10C9JJH3 530 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 USP17L13C9JLJ4 530 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 USP17L12C9JPN9 530 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 USP17L11C9JVI0 530 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 USP17L21D6R901 530 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 USP17L18D6R9N7 530 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 USP17L22D6RA61 530 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 USP17L17D6RBQ6 530 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 USP17L19D6RCP7 530 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 USP17L20D6RJB6 530 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 RASA1P20936 1047 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 USP17L24Q0WX57 530 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 EML3Q32P44 896 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 OXLD1Q5BKU9 147 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 TRMT44Q8IYL2 757 aaKnown RBP7.88□□□□□ -1.15
NIPBL-207ENST00000513819 STK32AQ8WU08 396 aa7.88□□□□□ -1.15
NIPBL-207ENST00000513819 NOVA2Q9UNW9 492 aaKnown RBP7.88□□□□□ -1.15
NIPBL-207ENST00000513819 ATP5J2-PTCD1G3V325 749 aa7.87□□□□□ -1.15
NIPBL-207ENST00000513819 LZTS3O60299 673 aaPredicted RBP7.87□□□□□ -1.15
NIPBL-207ENST00000513819 RPIAP49247 311 aa7.87□□□□□ -1.15
NIPBL-207ENST00000513819 WNT7BP56706 349 aa7.87□□□□□ -1.15
NIPBL-207ENST00000513819 RAB15P59190 212 aa7.87□□□□□ -1.15
NIPBL-207ENST00000513819 NBPF20Q3BBV1 942 aa7.87□□□□□ -1.15
NIPBL-207ENST00000513819 LARP1Q6PKG0 1096 aaKnown RBP7.87□□□□□ -1.15
NIPBL-207ENST00000513819 CDCA7Q9BWT1 371 aaPredicted RBP7.87□□□□□ -1.15
NIPBL-207ENST00000513819 FAM196BA6NMK8 535 aa7.86□□□□□ -1.15
NIPBL-207ENST00000513819 ESPNB1AK53 854 aa7.86□□□□□ -1.15
NIPBL-207ENST00000513819 VARSP26640 1264 aaKnown RBP7.86□□□□□ -1.15
NIPBL-207ENST00000513819 PTK7Q13308 1070 aa7.86□□□□□ -1.15
NIPBL-207ENST00000513819 ELOAQ14241 798 aaKnown RBP7.86□□□□□ -1.15
NIPBL-207ENST00000513819 TMEM164Q5U3C3 297 aa7.86□□□□□ -1.15
NIPBL-207ENST00000513819 RNF20Q5VTR2 975 aa7.86□□□□□ -1.15
NIPBL-207ENST00000513819 LIAT1Q6ZQX7 453 aa7.86□□□□□ -1.15
NIPBL-207ENST00000513819 CLDN10P78369 228 aa7.85□□□□□ -1.15
NIPBL-207ENST00000513819 OGFOD1Q8N543 542 aa7.85□□□□□ -1.15
NIPBL-207ENST00000513819 EHBP1Q8NDI1 1231 aa7.85□□□□□ -1.15
NIPBL-207ENST00000513819 EMID1Q96A84 441 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-207ENST00000513819 ZNF594Q96JF6 807 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-207ENST00000513819 KCTD15Q96SI1 283 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-207ENST00000513819 NOD1Q9Y239 953 aa7.85□□□□□ -1.15
NIPBL-207ENST00000513819 PCDHB11Q9Y5F2 797 aa7.85□□□□□ -1.15
NIPBL-207ENST00000513819 ARID5BQ14865 1188 aa7.84□□□□□ -1.15
NIPBL-207ENST00000513819 RC3H1Q5TC82 1133 aaKnown RBP7.84□□□□□ -1.15
NIPBL-207ENST00000513819 VASH1Q7L8A9 365 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-207ENST00000513819 CDV3Q9UKY7 258 aaKnown RBP7.84□□□□□ -1.15
NIPBL-207ENST00000513819 CD2BP2O95400 341 aaKnown RBP7.83□□□□□ -1.16
NIPBL-207ENST00000513819 BRD1O95696 1058 aa7.83□□□□□ -1.16
NIPBL-207ENST00000513819 INTS6LQ5JSJ4 861 aaKnown RBP7.83□□□□□ -1.16
NIPBL-207ENST00000513819 TRIM50Q86XT4 487 aa7.83□□□□□ -1.16
NIPBL-207ENST00000513819 ANKMY2Q8IV38 441 aa7.83□□□□□ -1.16
NIPBL-207ENST00000513819 DNAAF2Q9NVR5 837 aaKnown RBP7.83□□□□□ -1.16
NIPBL-207ENST00000513819 KIAA1024Q9UPX6 916 aa7.83□□□□□ -1.16
NIPBL-207ENST00000513819 ZBTB7BO15156 539 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-207ENST00000513819 GTF2IP78347 998 aa7.82□□□□□ -1.16
NIPBL-207ENST00000513819 DPYDQ12882 1025 aa7.82□□□□□ -1.16
NIPBL-207ENST00000513819 SEPT12Q8IYM1 358 aa7.82□□□□□ -1.16
NIPBL-207ENST00000513819 FAM200AQ8TCP9 573 aa7.82□□□□□ -1.16
NIPBL-207ENST00000513819 MAP4K5Q9Y4K4 846 aa7.82□□□□□ -1.16
NIPBL-207ENST00000513819 TLL2Q9Y6L7 1015 aa7.82□□□□□ -1.16
NIPBL-207ENST00000513819 ATP1A2P50993 1020 aa7.81□□□□□ -1.16
NIPBL-207ENST00000513819 ERVH48-1M5A8F1 160 aa7.8□□□□□ -1.16
NIPBL-207ENST00000513819 FSHRP23945 695 aa7.8□□□□□ -1.16
NIPBL-207ENST00000513819 USP4Q13107 963 aa7.8□□□□□ -1.16
NIPBL-207ENST00000513819 SLAIN2Q9P270 581 aa7.8□□□□□ -1.16
NIPBL-207ENST00000513819 PCDHGA11Q9Y5H2 935 aa7.8□□□□□ -1.16
NIPBL-207ENST00000513819 DKK1O94907 266 aa7.79□□□□□ -1.16
NIPBL-207ENST00000513819 SLC19A1P41440 591 aa7.79□□□□□ -1.16
NIPBL-207ENST00000513819 SCTRP47872 440 aa7.79□□□□□ -1.16
NIPBL-207ENST00000513819 PSME1Q06323 249 aa7.79□□□□□ -1.16
NIPBL-207ENST00000513819 KCNA1Q09470 495 aa7.79□□□□□ -1.16
NIPBL-207ENST00000513819 FAM69CQ0P6D2 419 aa7.79□□□□□ -1.16
NIPBL-207ENST00000513819 LARGE2Q8N3Y3 721 aa7.79□□□□□ -1.16
NIPBL-207ENST00000513819 CDK15Q96Q40 435 aa7.79□□□□□ -1.16
NIPBL-207ENST00000513819 GZF1Q9H116 711 aaPredicted RBP7.79□□□□□ -1.16
NIPBL-207ENST00000513819 PLA2G2EQ9NZK7 142 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms