RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 GOPCQ9HD26 462 aa4.82□□□□□ -1.64
AFP-205ENST00000513720 CHPF2Q9P2E5 772 aa4.82□□□□□ -1.64
AFP-205ENST00000513720 NRBP1Q9UHY1 535 aa4.82□□□□□ -1.64
AFP-205ENST00000513720 TMA7Q9Y2S6 64 aaKnown RBP4.82□□□□□ -1.64
AFP-205ENST00000513720 CCDC196A0A1B0GTZ2 297 aa4.81□□□□□ -1.64
AFP-205ENST00000513720 ATXN8OSP0DMR3 200 aa4.81□□□□□ -1.64
AFP-205ENST00000513720 ITGAEP38570 1179 aa4.81□□□□□ -1.64
AFP-205ENST00000513720 PPP4CP60510 307 aa4.81□□□□□ -1.64
AFP-205ENST00000513720 CHAF1AQ13111 956 aaPredicted RBP4.81□□□□□ -1.64
AFP-205ENST00000513720 CCDC70Q6NSX1 233 aa4.81□□□□□ -1.64
AFP-205ENST00000513720 CC2D1AQ6P1N0 951 aaPredicted RBP4.81□□□□□ -1.64
AFP-205ENST00000513720 UBE2Q1Q7Z7E8 422 aa4.81□□□□□ -1.64
AFP-205ENST00000513720 DRC7Q8IY82 874 aa4.81□□□□□ -1.64
AFP-205ENST00000513720 SAMD3Q8N6K7 520 aa4.81□□□□□ -1.64
AFP-205ENST00000513720 TMC1Q8TDI8 760 aa4.81□□□□□ -1.64
AFP-205ENST00000513720 SYAP1Q96A49 352 aaPredicted RBP4.81□□□□□ -1.64
AFP-205ENST00000513720 C8orf37Q96NL8 207 aa4.81□□□□□ -1.64
AFP-205ENST00000513720 POLR3CQ9BUI4 534 aaPredicted RBP4.81□□□□□ -1.64
AFP-205ENST00000513720 PHF8Q9UPP1 1060 aa4.81□□□□□ -1.64
AFP-205ENST00000513720 FAN1Q9Y2M0 1017 aa4.81□□□□□ -1.64
AFP-205ENST00000513720 ARIH1Q9Y4X5 557 aaPredicted RBP4.81□□□□□ -1.64
AFP-205ENST00000513720 RBM47A0AV96 593 aaKnown RBP4.8□□□□□ -1.64
AFP-205ENST00000513720 DYNC1I1O14576 645 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 U2AF1L5P0DN76 240 aaPredicted RBP4.8□□□□□ -1.64
AFP-205ENST00000513720 MS4A1P11836 297 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 FOSL1P15407 271 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 SH3BGRP55822 239 aaPredicted RBP4.8□□□□□ -1.64
AFP-205ENST00000513720 U2AF1Q01081 240 aaKnown RBP eCLIP4.8□□□□□ -1.646e-11■■□□□ 11.4
AFP-205ENST00000513720 IFT88Q13099 833 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 E2F5Q15329 346 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 JAKMIP3Q5VZ66 844 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 CCDC174Q6PII3 467 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 KIAA1211Q6ZU35 1233 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 SND1Q7KZF4 910 aaKnown RBP eCLIP4.8□□□□□ -1.64
AFP-205ENST00000513720 PABPN1Q86U42 306 aaKnown RBP eCLIP4.8□□□□□ -1.64
AFP-205ENST00000513720 IQCF2Q8IXL9 164 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 PAF1Q8N7H5 531 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 C17orf50Q8WW18 174 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 ZBTB9Q96C00 473 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 CCDC34Q96HJ3 373 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 GPATCH3Q96I76 525 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 MPP4Q96JB8 637 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 RMDN2Q96LZ7 410 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 ZNF396Q96N95 335 aaPredicted RBP4.8□□□□□ -1.64
AFP-205ENST00000513720 KIF2CQ99661 725 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 IQCGQ9H095 443 aaKnown RBP4.8□□□□□ -1.64
AFP-205ENST00000513720 DEF6Q9H4E7 631 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 ZHX3Q9H4I2 956 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 RMI1Q9H9A7 625 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 MAP3K20Q9NYL2 800 aaKnown RBP4.8□□□□□ -1.64
AFP-205ENST00000513720 KIAA1522Q9P206 1035 aaPredicted RBP4.8□□□□□ -1.64
AFP-205ENST00000513720 SUN2Q9UH99 717 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 SUFUQ9UMX1 484 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 IVNS1ABPQ9Y6Y0 642 aa4.8□□□□□ -1.64
AFP-205ENST00000513720 IL16Q14005 1332 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.79□□□□□ -1.64
AFP-205ENST00000513720 ANKRD18BA2A2Z9 1011 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 NPHP1O15259 732 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 PPFIA3O75145 1194 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 HSPA5P11021 654 aaKnown RBP4.79□□□□□ -1.64
AFP-205ENST00000513720 TNNT1P13805 278 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 SESN3P58005 492 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 ZC3H6P61129 1189 aaKnown RBP4.79□□□□□ -1.64
AFP-205ENST00000513720 FAM160A1Q05DH4 1040 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 MCM6Q14566 821 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 PTPROQ16827 1216 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 LARP1BQ659C4 914 aaKnown RBP4.79□□□□□ -1.64
AFP-205ENST00000513720 MSL1Q68DK7 614 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 OTUD6AQ7L8S5 288 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 DPH6Q7L8W6 267 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 PROSER2Q86WR7 435 aaPredicted RBP4.79□□□□□ -1.64
AFP-205ENST00000513720 FAM184AQ8NB25 1140 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 ENOX1Q8TC92 643 aaKnown RBP4.79□□□□□ -1.64
AFP-205ENST00000513720 SMCR8Q8TEV9 937 aaPredicted RBP4.79□□□□□ -1.64
AFP-205ENST00000513720 BHMTQ93088 406 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 CEP89Q96ST8 783 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 NOL10Q9BSC4 688 aaKnown RBP4.79□□□□□ -1.64
AFP-205ENST00000513720 TEX13AQ9BXU3 409 aaPredicted RBP4.79□□□□□ -1.64
AFP-205ENST00000513720 LRRC27Q9C0I9 530 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 RETREG1Q9H6L5 497 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 IFT122Q9HBG6 1241 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 NOL7Q9UMY1 257 aaKnown RBP4.79□□□□□ -1.64
AFP-205ENST00000513720 IQSEC3Q9UPP2 1182 aaPredicted RBP4.79□□□□□ -1.64
AFP-205ENST00000513720 IKBKGQ9Y6K9 419 aa4.79□□□□□ -1.64
AFP-205ENST00000513720 SBNO2Q9Y2G9 1366 aa4.78□□□□□ -1.64
AFP-205ENST00000513720 SHTN1A0MZ66 631 aa4.78□□□□□ -1.64
AFP-205ENST00000513720 TIMM44O43615 452 aa4.78□□□□□ -1.64
AFP-205ENST00000513720 PPFIA2O75334 1257 aa4.78□□□□□ -1.64
AFP-205ENST00000513720 GUCY2CP25092 1073 aa4.78□□□□□ -1.64
AFP-205ENST00000513720 MAGEA8P43361 318 aa4.78□□□□□ -1.64
AFP-205ENST00000513720 TRIM29Q14134 588 aa4.78□□□□□ -1.64
AFP-205ENST00000513720 SAFB2Q14151 953 aaKnown RBP eCLIP4.78□□□□□ -1.64
AFP-205ENST00000513720 ZSCAN26Q16670 478 aa4.78□□□□□ -1.64
AFP-205ENST00000513720 CCDC184Q52MB2 194 aa4.78□□□□□ -1.64
AFP-205ENST00000513720 FILIP1Q7Z7B0 1213 aa4.78□□□□□ -1.64
AFP-205ENST00000513720 CATIPQ7Z7H3 387 aa4.78□□□□□ -1.64
AFP-205ENST00000513720 PCGF5Q86SE9 256 aa4.78□□□□□ -1.64
AFP-205ENST00000513720 FMNL3Q8IVF7 1028 aa4.78□□□□□ -1.64
AFP-205ENST00000513720 LMNTD2Q8IXW0 634 aa4.78□□□□□ -1.64
AFP-205ENST00000513720 TEKT1Q969V4 418 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms