RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SBNO2Q9Y2G9 1366 aa17.9■□□□□ 0.46
VEGFA-216ENST00000512683 SLC24A1O60721 1099 aa17.89■□□□□ 0.45
VEGFA-216ENST00000512683 QRICH2Q9H0J4 1663 aa17.89■□□□□ 0.45
VEGFA-216ENST00000512683 CPSF1Q10570 1443 aaKnown RBP17.89■□□□□ 0.45
VEGFA-216ENST00000512683 EXOC5O00471 708 aa17.88■□□□□ 0.45
VEGFA-216ENST00000512683 SPON1Q9HCB6 807 aa17.88■□□□□ 0.45
VEGFA-216ENST00000512683 CSB-PGBD3P0DP91 1061 aa17.87■□□□□ 0.45
VEGFA-216ENST00000512683 KTN1Q86UP2 1357 aaKnown RBP17.87■□□□□ 0.45
VEGFA-216ENST00000512683 KCNQ2O43526 872 aa17.85■□□□□ 0.45
VEGFA-216ENST00000512683 USP31Q70CQ4 1352 aa17.85■□□□□ 0.45
VEGFA-216ENST00000512683 MARCH10Q8NA82 808 aaPredicted RBP17.85■□□□□ 0.45
VEGFA-216ENST00000512683 CCDC7Q96M83 1385 aa17.85■□□□□ 0.45
VEGFA-216ENST00000512683 CARD11Q9BXL7 1154 aa17.85■□□□□ 0.45
VEGFA-216ENST00000512683 TNS1Q9HBL0 1735 aaKnown RBP17.84■□□□□ 0.45
VEGFA-216ENST00000512683 HDGFL2Q7Z4V5 671 aaPredicted RBP17.83■□□□□ 0.44
VEGFA-216ENST00000512683 DCAF8L1A6NGE4 600 aa17.82■□□□□ 0.44
VEGFA-216ENST00000512683 TERF2IPQ9NYB0 399 aa17.82■□□□□ 0.44
VEGFA-216ENST00000512683 TRIM26Q12899 539 aaPredicted RBP17.8■□□□□ 0.44
VEGFA-216ENST00000512683 PPP1R1BQ9UD71 204 aaPredicted RBP17.8■□□□□ 0.44
VEGFA-216ENST00000512683 PARP4Q9UKK3 1724 aaKnown RBP17.8■□□□□ 0.44
VEGFA-216ENST00000512683 ABCC6O95255 1503 aa17.79■□□□□ 0.44
VEGFA-216ENST00000512683 SOX12O15370 315 aa17.79■□□□□ 0.44
VEGFA-216ENST00000512683 PROM2Q8N271 834 aa17.79■□□□□ 0.44
VEGFA-216ENST00000512683 TMC1Q8TDI8 760 aa17.79■□□□□ 0.44
VEGFA-216ENST00000512683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.78■□□□□ 0.44
VEGFA-216ENST00000512683 ERBB3P21860 1342 aa17.77■□□□□ 0.44
VEGFA-216ENST00000512683 SLC12A5Q9H2X9 1139 aa17.77■□□□□ 0.44
VEGFA-216ENST00000512683 NINLQ9Y2I6 1382 aa17.77■□□□□ 0.43
VEGFA-216ENST00000512683 TXNRD1Q16881 649 aa17.76■□□□□ 0.43
VEGFA-216ENST00000512683 PIK3C2AO00443 1686 aa17.75■□□□□ 0.43
VEGFA-216ENST00000512683 IL2RBP14784 551 aa17.75■□□□□ 0.43
VEGFA-216ENST00000512683 NME9Q86XW9 330 aa17.75■□□□□ 0.43
VEGFA-216ENST00000512683 NLRP2Q9NX02 1062 aa17.75■□□□□ 0.43
VEGFA-216ENST00000512683 STK32BQ9NY57 414 aa17.75■□□□□ 0.43
VEGFA-216ENST00000512683 COL18A1P39060 1754 aa17.75■□□□□ 0.43
VEGFA-216ENST00000512683 EDC4Q6P2E9 1401 aaKnown RBP17.74■□□□□ 0.43
VEGFA-216ENST00000512683 SLC15A2Q16348 729 aa17.74■□□□□ 0.43
VEGFA-216ENST00000512683 PTF1AQ7RTS3 328 aa17.74■□□□□ 0.43
VEGFA-216ENST00000512683 TONSLQ96HA7 1378 aa17.74■□□□□ 0.43
VEGFA-216ENST00000512683 NFAT5O94916 1531 aa17.73■□□□□ 0.43
VEGFA-216ENST00000512683 PEAK1Q9H792 1746 aa17.73■□□□□ 0.43
VEGFA-216ENST00000512683 ANKRD24Q8TF21 1146 aa17.73■□□□□ 0.43
VEGFA-216ENST00000512683 IP6K1Q92551 441 aa17.73■□□□□ 0.43
VEGFA-216ENST00000512683 ANO8Q9HCE9 1232 aaPredicted RBP17.73■□□□□ 0.43
VEGFA-216ENST00000512683 RREB1Q92766 1687 aa17.73■□□□□ 0.43
VEGFA-216ENST00000512683 AKAP12Q02952 1782 aa17.71■□□□□ 0.43
VEGFA-216ENST00000512683 CD163L1Q9NR16 1453 aa17.7■□□□□ 0.42
VEGFA-216ENST00000512683 YY1P25490 414 aa17.7■□□□□ 0.42
VEGFA-216ENST00000512683 TNS2Q63HR2 1409 aa17.7■□□□□ 0.42
VEGFA-216ENST00000512683 TESK2Q96S53 571 aa17.69■□□□□ 0.42
VEGFA-216ENST00000512683 LRRC37A3O60309 1634 aa17.69■□□□□ 0.42
VEGFA-216ENST00000512683 NUP188Q5SRE5 1749 aa17.68■□□□□ 0.42
VEGFA-216ENST00000512683 COG3Q96JB2 828 aa17.68■□□□□ 0.42
VEGFA-216ENST00000512683 MTFR1LQ9H019 292 aa17.68■□□□□ 0.42
VEGFA-216ENST00000512683 RGPD3A6NKT7 1758 aaPredicted RBP17.68■□□□□ 0.42
VEGFA-216ENST00000512683 RGPD4Q7Z3J3 1758 aa17.68■□□□□ 0.42
VEGFA-216ENST00000512683 ST20-MTHFSA0A0A6YYL1 179 aa17.67■□□□□ 0.42
VEGFA-216ENST00000512683 PTGER2P43116 358 aa17.67■□□□□ 0.42
VEGFA-216ENST00000512683 A0A1W2PP64 1363 aa17.66■□□□□ 0.42
VEGFA-216ENST00000512683 HMGB2P26583 209 aaKnown RBP17.66■□□□□ 0.42
VEGFA-216ENST00000512683 SLC27A3Q5K4L6 730 aa17.66■□□□□ 0.42
VEGFA-216ENST00000512683 ZBTB7AO95365 584 aa17.65■□□□□ 0.42
VEGFA-216ENST00000512683 SLC16A10Q8TF71 515 aa17.64■□□□□ 0.41
VEGFA-216ENST00000512683 ACSBG1Q96GR2 724 aa17.64■□□□□ 0.41
VEGFA-216ENST00000512683 AMPHP49418 695 aa17.63■□□□□ 0.41
VEGFA-216ENST00000512683 CDCA8Q53HL2 280 aa17.63■□□□□ 0.41
VEGFA-216ENST00000512683 PDGFDQ9GZP0 370 aaPredicted RBP17.63■□□□□ 0.41
VEGFA-216ENST00000512683 ATF5Q9Y2D1 282 aaPredicted RBP17.63■□□□□ 0.41
VEGFA-216ENST00000512683 MON2Q7Z3U7 1717 aa17.63■□□□□ 0.41
VEGFA-216ENST00000512683 TMF1P82094 1093 aa17.62■□□□□ 0.41
VEGFA-216ENST00000512683 SGIP1Q9BQI5 828 aa17.62■□□□□ 0.41
VEGFA-216ENST00000512683 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
VEGFA-216ENST00000512683 HOXC9P31274 260 aa17.61■□□□□ 0.41
VEGFA-216ENST00000512683 DDX54Q8TDD1 881 aaKnown RBP17.61■□□□□ 0.41
VEGFA-216ENST00000512683 SYT17Q9BSW7 474 aa17.61■□□□□ 0.41
VEGFA-216ENST00000512683 MAP3K19Q56UN5 1328 aa17.61■□□□□ 0.41
VEGFA-216ENST00000512683 USP54Q70EL1 1684 aa17.61■□□□□ 0.41
VEGFA-216ENST00000512683 ZCRB1Q8TBF4 217 aaKnown RBP17.6■□□□□ 0.41
VEGFA-216ENST00000512683 ANKRD36BQ8N2N9 1353 aa17.6■□□□□ 0.41
VEGFA-216ENST00000512683 ARXQ96QS3 562 aa17.59■□□□□ 0.41
VEGFA-216ENST00000512683 SBF2Q86WG5 1849 aa17.58■□□□□ 0.41
VEGFA-216ENST00000512683 RGPD5Q99666 1765 aa17.58■□□□□ 0.41
VEGFA-216ENST00000512683 FYB1O15117 783 aa17.58■□□□□ 0.4
VEGFA-216ENST00000512683 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
VEGFA-216ENST00000512683 LTV1Q96GA3 475 aaPredicted RBP17.58■□□□□ 0.4
VEGFA-216ENST00000512683 TIMELESSQ9UNS1 1208 aa17.58■□□□□ 0.4
VEGFA-216ENST00000512683 RTL1A6NKG5 1358 aa17.57■□□□□ 0.4
VEGFA-216ENST00000512683 MAP3K5Q99683 1374 aa17.57■□□□□ 0.4
VEGFA-216ENST00000512683 FHDC1Q9C0D6 1143 aaPredicted RBP17.57■□□□□ 0.4
VEGFA-216ENST00000512683 LRRC4BQ9NT99 713 aa17.57■□□□□ 0.4
VEGFA-216ENST00000512683 PRIM1P49642 420 aaKnown RBP17.56■□□□□ 0.4
VEGFA-216ENST00000512683 KIF24Q5T7B8 1368 aa17.55■□□□□ 0.4
VEGFA-216ENST00000512683 WNK3Q9BYP7 1800 aa17.54■□□□□ 0.4
VEGFA-216ENST00000512683 CASZ1Q86V15 1759 aa17.53■□□□□ 0.4
VEGFA-216ENST00000512683 POLD1P28340 1107 aa17.53■□□□□ 0.4
VEGFA-216ENST00000512683 ZNF827Q17R98 1081 aa17.53■□□□□ 0.4
VEGFA-216ENST00000512683 RAPGEF4Q8WZA2 1011 aa17.53■□□□□ 0.4
VEGFA-216ENST00000512683 NBPF6Q5VWK0 638 aa17.52■□□□□ 0.4
VEGFA-216ENST00000512683 SYTL4Q96C24 671 aaPredicted RBP17.52■□□□□ 0.4
VEGFA-216ENST00000512683 NBPF4Q96M43 638 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms