RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 DSG2Q14126 1118 aa12.38□□□□□ -0.43
NR1I3-230ENST00000511944 MAMSTRQ6ZN01 415 aa12.38□□□□□ -0.43
NR1I3-230ENST00000511944 TMC2Q8TDI7 906 aa12.38□□□□□ -0.43
NR1I3-230ENST00000511944 SLC26A8Q96RN1 970 aa12.38□□□□□ -0.43
NR1I3-230ENST00000511944 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
NR1I3-230ENST00000511944 AMOTL2Q9Y2J4 779 aa12.38□□□□□ -0.43
NR1I3-230ENST00000511944 LMTK3Q96Q04 1460 aa12.38□□□□□ -0.43
NR1I3-230ENST00000511944 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
NR1I3-230ENST00000511944 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
NR1I3-230ENST00000511944 NCOA3Q9Y6Q9 1424 aa12.37□□□□□ -0.43
NR1I3-230ENST00000511944 WASLO00401 505 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-230ENST00000511944 BRD4O60885 1362 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-230ENST00000511944 PLEKHH1Q9ULM0 1364 aa12.37□□□□□ -0.43
NR1I3-230ENST00000511944 CDC42BPGQ6DT37 1551 aa12.37□□□□□ -0.43
NR1I3-230ENST00000511944 MINK1Q8N4C8 1332 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-230ENST00000511944 SRPK2P78362 688 aaKnown RBP12.36□□□□□ -0.43
NR1I3-230ENST00000511944 SLAIN1Q8ND83 568 aa12.36□□□□□ -0.43
NR1I3-230ENST00000511944 TERF2IPQ9NYB0 399 aa12.36□□□□□ -0.43
NR1I3-230ENST00000511944 KCNA6P17658 529 aa12.35□□□□□ -0.43
NR1I3-230ENST00000511944 FOXK1P85037 733 aa12.35□□□□□ -0.43
NR1I3-230ENST00000511944 WAPLQ7Z5K2 1190 aa12.35□□□□□ -0.43
NR1I3-230ENST00000511944 CDK19Q9BWU1 502 aa12.35□□□□□ -0.43
NR1I3-230ENST00000511944 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
NR1I3-230ENST00000511944 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.34□□□□□ -0.43
NR1I3-230ENST00000511944 INSRP06213 1382 aa12.34□□□□□ -0.43
NR1I3-230ENST00000511944 NLRP13Q86W25 1043 aa12.34□□□□□ -0.43
NR1I3-230ENST00000511944 DDX27Q96GQ7 796 aaKnown RBP12.34□□□□□ -0.43
NR1I3-230ENST00000511944 CGNL1Q0VF96 1302 aa12.34□□□□□ -0.43
NR1I3-230ENST00000511944 SAFB2Q14151 953 aaKnown RBP eCLIP12.33□□□□□ -0.44
NR1I3-230ENST00000511944 PPP1R15BQ5SWA1 713 aa12.33□□□□□ -0.44
NR1I3-230ENST00000511944 CPSF1Q10570 1443 aaKnown RBP12.33□□□□□ -0.44
NR1I3-230ENST00000511944 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
NR1I3-230ENST00000511944 ADGRL3Q9HAR2 1447 aa12.33□□□□□ -0.44
NR1I3-230ENST00000511944 CD163L1Q9NR16 1453 aa12.33□□□□□ -0.44
NR1I3-230ENST00000511944 ITSN1Q15811 1721 aa12.32□□□□□ -0.44
NR1I3-230ENST00000511944 HDGFL2Q7Z4V5 671 aaPredicted RBP12.32□□□□□ -0.44
NR1I3-230ENST00000511944 PLPP6Q8IY26 295 aa12.32□□□□□ -0.44
NR1I3-230ENST00000511944 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
NR1I3-230ENST00000511944 DCCP43146 1447 aa12.31□□□□□ -0.44
NR1I3-230ENST00000511944 EDC4Q6P2E9 1401 aaKnown RBP12.31□□□□□ -0.44
NR1I3-230ENST00000511944 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
NR1I3-230ENST00000511944 SLC12A5Q9H2X9 1139 aa12.31□□□□□ -0.44
NR1I3-230ENST00000511944 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
NR1I3-230ENST00000511944 TMC1Q8TDI8 760 aa12.3□□□□□ -0.44
NR1I3-230ENST00000511944 FMN2Q9NZ56 1722 aa12.29□□□□□ -0.44
NR1I3-230ENST00000511944 PLEKHG3A1L390 1219 aa12.29□□□□□ -0.44
NR1I3-230ENST00000511944 NUDT16Q96DE0 195 aaKnown RBP12.29□□□□□ -0.44
NR1I3-230ENST00000511944 MON2Q7Z3U7 1717 aa12.28□□□□□ -0.44
NR1I3-230ENST00000511944 CENPBP07199 599 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-230ENST00000511944 WDR70Q9NW82 654 aa12.28□□□□□ -0.44
NR1I3-230ENST00000511944 POLR3AO14802 1390 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-230ENST00000511944 NALCNQ8IZF0 1738 aa12.28□□□□□ -0.44
NR1I3-230ENST00000511944 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
NR1I3-230ENST00000511944 MRS2Q9HD23 443 aa12.27□□□□□ -0.45
NR1I3-230ENST00000511944 AKAP12Q02952 1782 aa12.26□□□□□ -0.45
NR1I3-230ENST00000511944 STRCQ7RTU9 1775 aa12.26□□□□□ -0.45
NR1I3-230ENST00000511944 CABP1Q9NZU7 370 aa12.26□□□□□ -0.45
NR1I3-230ENST00000511944 PRR36Q9H6K5 1346 aa12.26□□□□□ -0.45
NR1I3-230ENST00000511944 NRKQ7Z2Y5 1582 aa12.26□□□□□ -0.45
NR1I3-230ENST00000511944 CAMK2BQ13554 666 aa12.25□□□□□ -0.45
NR1I3-230ENST00000511944 EMILIN3Q9NT22 766 aa12.25□□□□□ -0.45
NR1I3-230ENST00000511944 HOXB3P14651 431 aaPredicted RBP12.24□□□□□ -0.45
NR1I3-230ENST00000511944 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
NR1I3-230ENST00000511944 KCNV2Q8TDN2 545 aa12.24□□□□□ -0.45
NR1I3-230ENST00000511944 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
NR1I3-230ENST00000511944 KIF20BQ96Q89 1820 aa12.23□□□□□ -0.45
NR1I3-230ENST00000511944 USP6P35125 1406 aa12.23□□□□□ -0.45
NR1I3-230ENST00000511944 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
NR1I3-230ENST00000511944 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
NR1I3-230ENST00000511944 E2F4Q16254 413 aa12.23□□□□□ -0.45
NR1I3-230ENST00000511944 SSH2Q76I76 1423 aa12.22□□□□□ -0.45
NR1I3-230ENST00000511944 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
NR1I3-230ENST00000511944 PNISRQ8TF01 805 aaKnown RBP12.22□□□□□ -0.45
NR1I3-230ENST00000511944 C19orf44Q9H6X5 657 aa12.21□□□□□ -0.45
NR1I3-230ENST00000511944 KIF1AQ12756 1690 aa12.21□□□□□ -0.45
NR1I3-230ENST00000511944 AATKQ6ZMQ8 1374 aa12.2□□□□□ -0.46
NR1I3-230ENST00000511944 USP54Q70EL1 1684 aa12.2□□□□□ -0.46
NR1I3-230ENST00000511944 FYB1O15117 783 aa12.2□□□□□ -0.46
NR1I3-230ENST00000511944 HSPA2P54652 639 aa12.2□□□□□ -0.46
NR1I3-230ENST00000511944 PROSER2Q86WR7 435 aaPredicted RBP12.2□□□□□ -0.46
NR1I3-230ENST00000511944 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
NR1I3-230ENST00000511944 ACEP12821 1306 aa12.19□□□□□ -0.46
NR1I3-230ENST00000511944 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
NR1I3-230ENST00000511944 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
NR1I3-230ENST00000511944 CCDC184Q52MB2 194 aa12.18□□□□□ -0.46
NR1I3-230ENST00000511944 OVOS2A0A0J9YW53 1432 aa12.18□□□□□ -0.46
NR1I3-230ENST00000511944 OVOS2Q6IE36 1432 aa12.18□□□□□ -0.46
NR1I3-230ENST00000511944 STRCP1A6NGW2 1772 aa12.18□□□□□ -0.46
NR1I3-230ENST00000511944 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
NR1I3-230ENST00000511944 NGEFQ8N5V2 710 aa12.17□□□□□ -0.46
NR1I3-230ENST00000511944 UPF1Q92900 1129 aaKnown RBP eCLIP12.17□□□□□ -0.46
NR1I3-230ENST00000511944 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
NR1I3-230ENST00000511944 BLMP54132 1417 aaPredicted RBP12.17□□□□□ -0.46
NR1I3-230ENST00000511944 MST1RQ04912 1400 aa12.17□□□□□ -0.46
NR1I3-230ENST00000511944 MSH6P52701 1360 aa12.17□□□□□ -0.46
NR1I3-230ENST00000511944 ZBED9Q6R2W3 1325 aa12.16□□□□□ -0.46
NR1I3-230ENST00000511944 C1orf167Q5SNV9 1468 aa12.16□□□□□ -0.46
NR1I3-230ENST00000511944 SLC34A2O95436 690 aa12.16□□□□□ -0.46
NR1I3-230ENST00000511944 OXER1Q8TDS5 423 aa12.16□□□□□ -0.46
NR1I3-230ENST00000511944 PNPLA6Q8IY17 1366 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms