RNA–Protein interactions for RNA: ENST00000510056.5

MATR3-215, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-215ENST00000510056 ADAMTS2O95450 1211 aa9.09□□□□□ -0.95
MATR3-215ENST00000510056 RBM6P78332 1123 aaKnown RBP9.09□□□□□ -0.95
MATR3-215ENST00000510056 GIPC2Q8TF65 315 aa9.09□□□□□ -0.95
MATR3-215ENST00000510056 EMILIN3Q9NT22 766 aa9.09□□□□□ -0.95
MATR3-215ENST00000510056 CDK12Q9NYV4 1490 aaPredicted RBP9.09□□□□□ -0.95
MATR3-215ENST00000510056 EFCAB3Q8N7B9 438 aa9.09□□□□□ -0.95
MATR3-215ENST00000510056 PBXIP1Q96AQ6 731 aa9.09□□□□□ -0.95
MATR3-215ENST00000510056 ZRANB1Q9UGI0 708 aa9.09□□□□□ -0.95
MATR3-215ENST00000510056 MYOM3Q5VTT5 1437 aa9.08□□□□□ -0.96
MATR3-215ENST00000510056 AHDC1Q5TGY3 1603 aaPredicted RBP9.08□□□□□ -0.96
MATR3-215ENST00000510056 RAB11FIP3O75154 756 aa9.08□□□□□ -0.96
MATR3-215ENST00000510056 MNX1P50219 401 aaPredicted RBP9.08□□□□□ -0.96
MATR3-215ENST00000510056 C9orf131Q5VYM1 1079 aa9.08□□□□□ -0.96
MATR3-215ENST00000510056 RIMS2Q9UQ26 1411 aa9.08□□□□□ -0.96
MATR3-215ENST00000510056 NGLY1Q96IV0 654 aa9.08□□□□□ -0.96
MATR3-215ENST00000510056 PHOX2BQ99453 314 aa9.08□□□□□ -0.96
MATR3-215ENST00000510056 ERBINQ96RT1 1412 aa9.08□□□□□ -0.96
MATR3-215ENST00000510056 MINK1Q8N4C8 1332 aaPredicted RBP9.08□□□□□ -0.96
MATR3-215ENST00000510056 PLEKHG1Q9ULL1 1385 aa9.08□□□□□ -0.96
MATR3-215ENST00000510056 MICAL1Q8TDZ2 1067 aa9.07□□□□□ -0.96
MATR3-215ENST00000510056 LOC102724159A0A0B4J2E5 919 aa9.07□□□□□ -0.96
MATR3-215ENST00000510056 PWP2Q15269 919 aaKnown RBP9.07□□□□□ -0.96
MATR3-215ENST00000510056 BCCIPQ9P287 314 aaKnown RBP eCLIP9.07□□□□□ -0.96
MATR3-215ENST00000510056 DIP2AQ14689 1571 aa9.07□□□□□ -0.96
MATR3-215ENST00000510056 SETBP1Q9Y6X0 1596 aa9.07□□□□□ -0.96
MATR3-215ENST00000510056 GPATCH3Q96I76 525 aa9.07□□□□□ -0.96
MATR3-215ENST00000510056 DRC1Q96MC2 740 aa9.07□□□□□ -0.96
MATR3-215ENST00000510056 DNAJC2Q99543 621 aaKnown RBP9.07□□□□□ -0.96
MATR3-215ENST00000510056 TBX22Q9Y458 520 aa9.07□□□□□ -0.96
MATR3-215ENST00000510056 ABCC5O15440 1437 aa9.07□□□□□ -0.96
MATR3-215ENST00000510056 NOS1P29475 1434 aa9.06□□□□□ -0.96
MATR3-215ENST00000510056 EP400Q96L91 3159 aa9.06□□□□□ -0.96
MATR3-215ENST00000510056 ZFYVE9O95405 1425 aa9.06□□□□□ -0.96
MATR3-215ENST00000510056 SRPK2P78362 688 aaKnown RBP9.06□□□□□ -0.96
MATR3-215ENST00000510056 DNAJC14Q6Y2X3 702 aaPredicted RBP9.06□□□□□ -0.96
MATR3-215ENST00000510056 HIRIP3Q9BW71 556 aaPredicted RBP9.06□□□□□ -0.96
MATR3-215ENST00000510056 TMEM88BA6NKF7 163 aa9.05□□□□□ -0.96
MATR3-215ENST00000510056 HDGFP51858 240 aaKnown RBP9.05□□□□□ -0.96
MATR3-215ENST00000510056 SREK1Q8WXA9 508 aaKnown RBP9.05□□□□□ -0.96
MATR3-215ENST00000510056 GCC2Q8IWJ2 1684 aa9.05□□□□□ -0.96
MATR3-215ENST00000510056 SH3D19Q5HYK7 790 aa9.05□□□□□ -0.96
MATR3-215ENST00000510056 LRRC59Q96AG4 307 aaKnown RBP9.05□□□□□ -0.96
MATR3-215ENST00000510056 FARP1Q9Y4F1 1045 aaPredicted RBP9.05□□□□□ -0.96
MATR3-215ENST00000510056 ATAD2Q6PL18 1390 aa9.05□□□□□ -0.96
MATR3-215ENST00000510056 TBC1D12O60347 775 aa9.05□□□□□ -0.96
MATR3-215ENST00000510056 CSB-PGBD3P0DP91 1061 aa9.05□□□□□ -0.96
MATR3-215ENST00000510056 CRISPLD2Q9H0B8 497 aa9.05□□□□□ -0.96
MATR3-215ENST00000510056 KLHL42Q9P2K6 505 aa9.04□□□□□ -0.96
MATR3-215ENST00000510056 ASXL1Q8IXJ9 1541 aa9.04□□□□□ -0.96
MATR3-215ENST00000510056 ANKRD13AQ8IZ07 590 aa9.04□□□□□ -0.96
MATR3-215ENST00000510056 NCOA3Q9Y6Q9 1424 aa9.04□□□□□ -0.96
MATR3-215ENST00000510056 CROCC2H7BZ55 1655 aa9.03□□□□□ -0.96
MATR3-215ENST00000510056 FAM161AQ3B820 660 aa9.03□□□□□ -0.96
MATR3-215ENST00000510056 USP21Q9UK80 565 aa9.03□□□□□ -0.96
MATR3-215ENST00000510056 ADAMTS13Q76LX8 1427 aa9.03□□□□□ -0.96
MATR3-215ENST00000510056 LMTK2Q8IWU2 1503 aa9.03□□□□□ -0.96
MATR3-215ENST00000510056 CHRM1P11229 460 aaPredicted RBP9.03□□□□□ -0.96
MATR3-215ENST00000510056 HDGFL1Q5TGJ6 251 aa9.03□□□□□ -0.96
MATR3-215ENST00000510056 CC2D2BQ6DHV5 1058 aa9.03□□□□□ -0.96
MATR3-215ENST00000510056 DAPK1P53355 1430 aa9.02□□□□□ -0.96
MATR3-215ENST00000510056 PTPRUQ92729 1446 aa9.02□□□□□ -0.96
MATR3-215ENST00000510056 SETD5Q9C0A6 1442 aa9.02□□□□□ -0.96
MATR3-215ENST00000510056 PNPLA6Q8IY17 1366 aa9.02□□□□□ -0.96
MATR3-215ENST00000510056 PEX14O75381 377 aa9.02□□□□□ -0.96
MATR3-215ENST00000510056 CAMK2BQ13554 666 aa9.02□□□□□ -0.96
MATR3-215ENST00000510056 BCL2L13Q9BXK5 485 aa9.02□□□□□ -0.96
MATR3-215ENST00000510056 SPDYE2BA6NHP3 402 aa9.02□□□□□ -0.97
MATR3-215ENST00000510056 NEFLP07196 543 aa9.02□□□□□ -0.97
MATR3-215ENST00000510056 SPDYE6P0CI01 402 aa9.02□□□□□ -0.97
MATR3-215ENST00000510056 SPDYE2Q495Y8 402 aa9.02□□□□□ -0.97
MATR3-215ENST00000510056 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.02□□□□□ -0.97
MATR3-215ENST00000510056 VRTNQ9H8Y1 702 aa9.02□□□□□ -0.97
MATR3-215ENST00000510056 RBM27Q9P2N5 1060 aaKnown RBP9.02□□□□□ -0.97
MATR3-215ENST00000510056 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.02□□□□□ -0.97
MATR3-215ENST00000510056 PPME1Q9Y570 386 aa9.02□□□□□ -0.97
MATR3-215ENST00000510056 TMEM131LA2VDJ0 1609 aa9.02□□□□□ -0.97
MATR3-215ENST00000510056 ANKRD30AQ9BXX3 1397 aa9.01□□□□□ -0.97
MATR3-215ENST00000510056 PTPN23Q9H3S7 1636 aa9.01□□□□□ -0.97
MATR3-215ENST00000510056 SPDYE5A6NIY4 337 aa9.01□□□□□ -0.97
MATR3-215ENST00000510056 MDM2Q00987 491 aaPredicted RBP9.01□□□□□ -0.97
MATR3-215ENST00000510056 MFSD10Q14728 455 aa9.01□□□□□ -0.97
MATR3-215ENST00000510056 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.01□□□□□ -0.97
MATR3-215ENST00000510056 BEGAINQ9BUH8 593 aa9.01□□□□□ -0.97
MATR3-215ENST00000510056 RIPOR2Q9Y4F9 1068 aa9.01□□□□□ -0.97
MATR3-215ENST00000510056 MST1RQ04912 1400 aa9.01□□□□□ -0.97
MATR3-215ENST00000510056 PRIM1P49642 420 aaKnown RBP9□□□□□ -0.97
MATR3-215ENST00000510056 RFC5P40937 340 aa9□□□□□ -0.97
MATR3-215ENST00000510056 NAALADL2Q58DX5 795 aa9□□□□□ -0.97
MATR3-215ENST00000510056 CABP2Q9NPB3 220 aa9□□□□□ -0.97
MATR3-215ENST00000510056 TRPC5Q9UL62 973 aaPredicted RBP9□□□□□ -0.97
MATR3-215ENST00000510056 NHSL1Q5SYE7 1610 aa9□□□□□ -0.97
MATR3-215ENST00000510056 GNPATO15228 680 aa8.99□□□□□ -0.97
MATR3-215ENST00000510056 VPS8Q8N3P4 1428 aa8.99□□□□□ -0.97
MATR3-215ENST00000510056 CLSTN1O94985 981 aa8.99□□□□□ -0.97
MATR3-215ENST00000510056 DPH6Q7L8W6 267 aa8.99□□□□□ -0.97
MATR3-215ENST00000510056 TRPM2O94759 1503 aa8.98□□□□□ -0.97
MATR3-215ENST00000510056 MS4A4AQ96JQ5 239 aa8.98□□□□□ -0.97
MATR3-215ENST00000510056 LMOD1P29536 600 aaPredicted RBP8.98□□□□□ -0.97
MATR3-215ENST00000510056 DEFB132Q7Z7B7 95 aa8.98□□□□□ -0.97
MATR3-215ENST00000510056 SUGT1Q9Y2Z0 365 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms