RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 KANK1Q14678 1352 aa6.87□□□□□ -1.31
CALCOCO2-213ENST00000509112 KIF15Q9NS87 1388 aa6.87□□□□□ -1.31
CALCOCO2-213ENST00000509112 JCADQ9P266 1359 aa6.87□□□□□ -1.31
CALCOCO2-213ENST00000509112 CLCN1P35523 988 aa6.87□□□□□ -1.31
CALCOCO2-213ENST00000509112 NEUROD2Q15784 382 aa6.87□□□□□ -1.31
CALCOCO2-213ENST00000509112 LCE2DQ5TA82 110 aaPredicted RBP6.87□□□□□ -1.31
CALCOCO2-213ENST00000509112 POTEAQ6S8J7 498 aa6.87□□□□□ -1.31
CALCOCO2-213ENST00000509112 FAM163AQ96GL9 167 aaPredicted RBP6.87□□□□□ -1.31
CALCOCO2-213ENST00000509112 KCNK17Q96T54 332 aa6.87□□□□□ -1.31
CALCOCO2-213ENST00000509112 SHPRHQ149N8 1683 aa6.87□□□□□ -1.31
CALCOCO2-213ENST00000509112 COL16A1Q07092 1604 aaPredicted RBP6.87□□□□□ -1.31
CALCOCO2-213ENST00000509112 ABCC5O15440 1437 aa6.86□□□□□ -1.31
CALCOCO2-213ENST00000509112 MSH6P52701 1360 aa6.86□□□□□ -1.31
CALCOCO2-213ENST00000509112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.86□□□□□ -1.31
CALCOCO2-213ENST00000509112 TMUB1Q9BVT8 246 aa6.86□□□□□ -1.31
CALCOCO2-213ENST00000509112 SLC52A1Q9NWF4 448 aa6.86□□□□□ -1.31
CALCOCO2-213ENST00000509112 RABGEF1Q9UJ41 708 aa6.86□□□□□ -1.31
CALCOCO2-213ENST00000509112 AHDC1Q5TGY3 1603 aaPredicted RBP6.86□□□□□ -1.31
CALCOCO2-213ENST00000509112 PTPN23Q9H3S7 1636 aa6.86□□□□□ -1.31
CALCOCO2-213ENST00000509112 SPATA31A6Q5VVP1 1343 aa6.85□□□□□ -1.31
CALCOCO2-213ENST00000509112 FAM205CA6NFA0 338 aa6.85□□□□□ -1.31
CALCOCO2-213ENST00000509112 IDI1Q13907 227 aa6.85□□□□□ -1.31
CALCOCO2-213ENST00000509112 MARVELD3Q96A59 401 aa6.85□□□□□ -1.31
CALCOCO2-213ENST00000509112 HS3ST6Q96QI5 342 aa6.85□□□□□ -1.31
CALCOCO2-213ENST00000509112 EYA1Q99502 592 aa6.85□□□□□ -1.31
CALCOCO2-213ENST00000509112 TSKSQ9UJT2 592 aa6.85□□□□□ -1.31
CALCOCO2-213ENST00000509112 DIP2AQ14689 1571 aa6.85□□□□□ -1.31
CALCOCO2-213ENST00000509112 CDK12Q9NYV4 1490 aaPredicted RBP6.85□□□□□ -1.31
CALCOCO2-213ENST00000509112 ZFYVE9O95405 1425 aa6.84□□□□□ -1.31
CALCOCO2-213ENST00000509112 DAPK1P53355 1430 aa6.84□□□□□ -1.31
CALCOCO2-213ENST00000509112 PIK3R4Q99570 1358 aa6.84□□□□□ -1.31
CALCOCO2-213ENST00000509112 PLEKHG1Q9ULL1 1385 aa6.84□□□□□ -1.31
CALCOCO2-213ENST00000509112 POTEEQ6S8J3 1075 aa6.84□□□□□ -1.31
CALCOCO2-213ENST00000509112 PROSER2Q86WR7 435 aaPredicted RBP6.84□□□□□ -1.31
CALCOCO2-213ENST00000509112 PARP9Q8IXQ6 854 aa6.84□□□□□ -1.31
CALCOCO2-213ENST00000509112 DDRGK1Q96HY6 314 aa6.84□□□□□ -1.31
CALCOCO2-213ENST00000509112 KDM4CQ9H3R0 1056 aa6.84□□□□□ -1.31
CALCOCO2-213ENST00000509112 GPCPD1Q9NPB8 672 aa6.84□□□□□ -1.31
CALCOCO2-213ENST00000509112 ADGRL2O95490 1459 aa6.84□□□□□ -1.31
CALCOCO2-213ENST00000509112 SETD1AO15047 1707 aaKnown RBP6.84□□□□□ -1.31
CALCOCO2-213ENST00000509112 TMEM131LA2VDJ0 1609 aa6.83□□□□□ -1.32
CALCOCO2-213ENST00000509112 ANKRD30AQ9BXX3 1397 aa6.83□□□□□ -1.32
CALCOCO2-213ENST00000509112 MYO5BQ9ULV0 1848 aa6.83□□□□□ -1.32
CALCOCO2-213ENST00000509112 DNAJB2P25686 324 aa6.83□□□□□ -1.32
CALCOCO2-213ENST00000509112 HDGFP51858 240 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-213ENST00000509112 LAPTM4BQ86VI4 370 aa6.83□□□□□ -1.32
CALCOCO2-213ENST00000509112 TATDN2Q93075 761 aa6.83□□□□□ -1.32
CALCOCO2-213ENST00000509112 SLAIN2Q9P270 581 aa6.83□□□□□ -1.32
CALCOCO2-213ENST00000509112 FAM198AQ9UFP1 575 aa6.83□□□□□ -1.32
CALCOCO2-213ENST00000509112 TBX22Q9Y458 520 aa6.83□□□□□ -1.32
CALCOCO2-213ENST00000509112 GCC2Q8IWJ2 1684 aa6.83□□□□□ -1.32
CALCOCO2-213ENST00000509112 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.82□□□□□ -1.32
CALCOCO2-213ENST00000509112 ZNF772Q68DY9 489 aaPredicted RBP6.82□□□□□ -1.32
CALCOCO2-213ENST00000509112 LRP6O75581 1613 aa6.81□□□□□ -1.32
CALCOCO2-213ENST00000509112 PSEN2P49810 448 aa6.81□□□□□ -1.32
CALCOCO2-213ENST00000509112 TTLL12Q14166 644 aaPredicted RBP6.81□□□□□ -1.32
CALCOCO2-213ENST00000509112 KANK4Q5T7N3 995 aaPredicted RBP6.81□□□□□ -1.32
CALCOCO2-213ENST00000509112 SLC26A8Q96RN1 970 aa6.81□□□□□ -1.32
CALCOCO2-213ENST00000509112 NBPF3Q9H094 633 aa6.81□□□□□ -1.32
CALCOCO2-213ENST00000509112 GOPCQ9HD26 462 aa6.81□□□□□ -1.32
CALCOCO2-213ENST00000509112 VPS9D1Q9Y2B5 631 aa6.81□□□□□ -1.32
CALCOCO2-213ENST00000509112 DCCP43146 1447 aa6.81□□□□□ -1.32
CALCOCO2-213ENST00000509112 BHMG1C9JSJ3 638 aaPredicted RBP6.8□□□□□ -1.32
CALCOCO2-213ENST00000509112 PROX2Q3B8N5 592 aa6.8□□□□□ -1.32
CALCOCO2-213ENST00000509112 GIGYF2Q6Y7W6 1299 aaKnown RBP6.8□□□□□ -1.32
CALCOCO2-213ENST00000509112 NUDT18Q6ZVK8 323 aa6.8□□□□□ -1.32
CALCOCO2-213ENST00000509112 SULF1Q8IWU6 871 aa6.8□□□□□ -1.32
CALCOCO2-213ENST00000509112 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.8□□□□□ -1.32
CALCOCO2-213ENST00000509112 PHOX2BQ99453 314 aa6.8□□□□□ -1.32
CALCOCO2-213ENST00000509112 TMEM134Q9H6X4 195 aa6.8□□□□□ -1.32
CALCOCO2-213ENST00000509112 RRP7BPQ9NSQ0 103 aa6.8□□□□□ -1.32
CALCOCO2-213ENST00000509112 PNMA3Q9UL41 463 aa6.8□□□□□ -1.32
CALCOCO2-213ENST00000509112 RIMS2Q9UQ26 1411 aa6.8□□□□□ -1.32
CALCOCO2-213ENST00000509112 NHSL1Q5SYE7 1610 aa6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 UNC13BO14795 1591 aa6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 ADAMTS13Q76LX8 1427 aa6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 SETD5Q9C0A6 1442 aa6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 POTEB3A0JP26 581 aa6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 RCCD1A6NED2 376 aa6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 LSM11P83369 360 aaKnown RBP eCLIP6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 FAM98CQ17RN3 349 aaKnown RBP6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 DMRTA1Q5VZB9 504 aa6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 POTEBQ6S5H4 581 aa6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 C19orf44Q9H6X5 657 aa6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 GPBP1L1Q9HC44 474 aaPredicted RBP6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 FAM217BQ9NTX9 383 aaPredicted RBP6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 KIAA1468Q9P260 1216 aa6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 TRPM2O94759 1503 aa6.79□□□□□ -1.32
CALCOCO2-213ENST00000509112 DIXDC1Q155Q3 683 aa6.78□□□□□ -1.32
CALCOCO2-213ENST00000509112 NECTIN2Q92692 538 aa6.78□□□□□ -1.32
CALCOCO2-213ENST00000509112 LAMC1P11047 1609 aa6.78□□□□□ -1.32
CALCOCO2-213ENST00000509112 XRN1Q8IZH2 1706 aaKnown RBP6.78□□□□□ -1.32
CALCOCO2-213ENST00000509112 ANKRD50Q9ULJ7 1429 aa6.77□□□□□ -1.33
CALCOCO2-213ENST00000509112 IQGAP3Q86VI3 1631 aa6.77□□□□□ -1.33
CALCOCO2-213ENST00000509112 SLC4A3P48751 1232 aa6.77□□□□□ -1.33
CALCOCO2-213ENST00000509112 MDM2Q00987 491 aaPredicted RBP6.77□□□□□ -1.33
CALCOCO2-213ENST00000509112 AXIN2Q9Y2T1 843 aa6.77□□□□□ -1.33
CALCOCO2-213ENST00000509112 SETBP1Q9Y6X0 1596 aa6.77□□□□□ -1.33
CALCOCO2-213ENST00000509112 E9PCH4 1651 aa6.77□□□□□ -1.33
CALCOCO2-213ENST00000509112 HRO43593 1189 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms