RNA–Protein interactions for RNA: ENST00000508777.5

RAI14-213, Transcript of retinoic acid induced 14, human

TSL 1 (best)

Gene RAI14, Length 1,387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAI14-213	ENST00000508777	SLIT3	O75094	1523 aa		11.7	□□□□□ -0.54
RAI14-213	ENST00000508777	SHPRH	Q149N8	1683 aa		11.7	□□□□□ -0.54
RAI14-213	ENST00000508777	DDX17	Q92841	729 aa	Known RBP	11.69	□□□□□ -0.54
RAI14-213	ENST00000508777	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.69	□□□□□ -0.54
RAI14-213	ENST00000508777	LTN1	O94822	1766 aa		11.69	□□□□□ -0.54
RAI14-213	ENST00000508777	USP19	O94966	1318 aa		11.69	□□□□□ -0.54
RAI14-213	ENST00000508777	GC	P02774	474 aa		11.68	□□□□□ -0.54
RAI14-213	ENST00000508777	PPP2R1A	P30153	589 aa		11.68	□□□□□ -0.54
RAI14-213	ENST00000508777	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.68	□□□□□ -0.54
RAI14-213	ENST00000508777	CRYBG1	Q9Y4K1	1723 aa		11.68	□□□□□ -0.54
RAI14-213	ENST00000508777	JCAD	Q9P266	1359 aa		11.68	□□□□□ -0.54
RAI14-213	ENST00000508777	ABCC6	O95255	1503 aa		11.68	□□□□□ -0.54
RAI14-213	ENST00000508777	MIER1	Q8N108	512 aa		11.67	□□□□□ -0.54
RAI14-213	ENST00000508777	TNNT2	P45379	298 aa	Predicted RBP	11.67	□□□□□ -0.54
RAI14-213	ENST00000508777	NUTM2G	Q5VZR2	741 aa		11.67	□□□□□ -0.54
RAI14-213	ENST00000508777	ABCA3	Q99758	1704 aa		11.67	□□□□□ -0.54
RAI14-213	ENST00000508777	RTL1	A6NKG5	1358 aa		11.66	□□□□□ -0.54
RAI14-213	ENST00000508777	SMG6	Q86US8	1419 aa	Known RBP	11.66	□□□□□ -0.54
RAI14-213	ENST00000508777	AMPH	P49418	695 aa		11.66	□□□□□ -0.54
RAI14-213	ENST00000508777	MTHFS	P49914	203 aa		11.66	□□□□□ -0.54
RAI14-213	ENST00000508777	ZRANB1	Q9UGI0	708 aa		11.66	□□□□□ -0.54
RAI14-213	ENST00000508777	NUDC	Q9Y266	331 aa		11.66	□□□□□ -0.54
RAI14-213	ENST00000508777	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.65	□□□□□ -0.54
RAI14-213	ENST00000508777	PNPLA6	Q8IY17	1366 aa		11.65	□□□□□ -0.54
RAI14-213	ENST00000508777	FBXO41	Q8TF61	875 aa		11.65	□□□□□ -0.55
RAI14-213	ENST00000508777	MRS2	Q9HD23	443 aa		11.65	□□□□□ -0.55
RAI14-213	ENST00000508777	POLK	Q9UBT6	870 aa		11.65	□□□□□ -0.55
RAI14-213	ENST00000508777	NFAT5	O94916	1531 aa		11.64	□□□□□ -0.55
RAI14-213	ENST00000508777	SPATA31A6	Q5VVP1	1343 aa		11.64	□□□□□ -0.55
RAI14-213	ENST00000508777	CPD	O75976	1380 aa		11.64	□□□□□ -0.55
RAI14-213	ENST00000508777	INSR	P06213	1382 aa		11.64	□□□□□ -0.55
RAI14-213	ENST00000508777	FLT4	P35916	1363 aa		11.64	□□□□□ -0.55
RAI14-213	ENST00000508777	BLM	P54132	1417 aa	Predicted RBP	11.63	□□□□□ -0.55
RAI14-213	ENST00000508777	PPM1G	O15355	546 aa	Predicted RBP	11.63	□□□□□ -0.55
RAI14-213	ENST00000508777	SOX12	O15370	315 aa		11.63	□□□□□ -0.55
RAI14-213	ENST00000508777	ARHGEF25	Q86VW2	580 aa		11.63	□□□□□ -0.55
RAI14-213	ENST00000508777	PNN	Q9H307	717 aa	Known RBP	11.63	□□□□□ -0.55
RAI14-213	ENST00000508777	CLEC11A	Q9Y240	323 aa		11.63	□□□□□ -0.55
RAI14-213	ENST00000508777	MAP3K19	Q56UN5	1328 aa		11.63	□□□□□ -0.55
RAI14-213	ENST00000508777	FAM208A	Q9UK61	1670 aa	Known RBP	11.63	□□□□□ -0.55
RAI14-213	ENST00000508777	WDR43	Q15061	677 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
RAI14-213	ENST00000508777	IP6K1	Q92551	441 aa		11.62	□□□□□ -0.55
RAI14-213	ENST00000508777	COL14A1	Q05707	1796 aa	Known RBP	11.62	□□□□□ -0.55
RAI14-213	ENST00000508777	DIAPH1	O60610	1272 aa	Known RBP	11.61	□□□□□ -0.55
RAI14-213	ENST00000508777	POTEI	P0CG38	1075 aa		11.61	□□□□□ -0.55
RAI14-213	ENST00000508777	HSPA1L	P34931	641 aa		11.61	□□□□□ -0.55
RAI14-213	ENST00000508777	RRS1	Q15050	365 aa	Known RBP	11.61	□□□□□ -0.55
RAI14-213	ENST00000508777	PRDM11	Q9NQV5	511 aa		11.61	□□□□□ -0.55
RAI14-213	ENST00000508777	ZC3H6	P61129	1189 aa	Known RBP	11.6	□□□□□ -0.55
RAI14-213	ENST00000508777	CABLES1	Q8TDN4	633 aa		11.6	□□□□□ -0.55
RAI14-213	ENST00000508777	EMILIN1	Q9Y6C2	1016 aa		11.6	□□□□□ -0.55
RAI14-213	ENST00000508777	NEFM	P07197	916 aa		11.59	□□□□□ -0.55
RAI14-213	ENST00000508777	HOXC9	P31274	260 aa		11.59	□□□□□ -0.55
RAI14-213	ENST00000508777	RGPD5	Q99666	1765 aa		11.59	□□□□□ -0.55
RAI14-213	ENST00000508777	COL18A1	P39060	1754 aa		11.58	□□□□□ -0.56
RAI14-213	ENST00000508777	PEAK1	Q9H792	1746 aa		11.58	□□□□□ -0.56
RAI14-213	ENST00000508777	NWD2	Q9ULI1	1742 aa		11.58	□□□□□ -0.56
RAI14-213	ENST00000508777	KIAA0232	Q92628	1395 aa		11.58	□□□□□ -0.56
RAI14-213	ENST00000508777	ZBTB7C	A1YPR0	619 aa		11.58	□□□□□ -0.56
RAI14-213	ENST00000508777	PLEKHG5	O94827	1062 aa		11.58	□□□□□ -0.56
RAI14-213	ENST00000508777	PNISR	Q8TF01	805 aa	Known RBP	11.57	□□□□□ -0.56
RAI14-213	ENST00000508777	FBLN1	P23142	703 aa		11.56	□□□□□ -0.56
RAI14-213	ENST00000508777	HSP90AB2P	Q58FF8	381 aa		11.56	□□□□□ -0.56
RAI14-213	ENST00000508777	LMO7	Q8WWI1	1683 aa		11.56	□□□□□ -0.56
RAI14-213	ENST00000508777	COL3A1	P02461	1466 aa	Predicted RBP	11.56	□□□□□ -0.56
RAI14-213	ENST00000508777	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.55	□□□□□ -0.56
RAI14-213	ENST00000508777	NUTM2E	B1AL46	878 aa	Predicted RBP	11.55	□□□□□ -0.56
RAI14-213	ENST00000508777	CLCN6	P51797	869 aa		11.55	□□□□□ -0.56
RAI14-213	ENST00000508777	EVA1C	P58658	441 aa		11.55	□□□□□ -0.56
RAI14-213	ENST00000508777	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.55	□□□□□ -0.56
RAI14-213	ENST00000508777	PLCH1	Q4KWH8	1693 aa		11.55	□□□□□ -0.56
RAI14-213	ENST00000508777	U2SURP	O15042	1029 aa	Known RBP	11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	FCHSD2	O94868	740 aa		11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	CSB-PGBD3	P0DP91	1061 aa		11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	IL13	P35225	146 aa		11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	EIF4A2	Q14240	407 aa	Known RBP	11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	MEX3C	Q5U5Q3	659 aa	Known RBP	11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	PLEKHG2	Q9H7P9	1386 aa		11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	ERBB3	P21860	1342 aa		11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	FAM83G	A6ND36	823 aa		11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	ADAMTS2	O95450	1211 aa		11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	CHRNA2	Q15822	529 aa		11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	FAM9B	Q8IZU0	186 aa		11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	NGEF	Q8N5V2	710 aa		11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	ANKRD24	Q8TF21	1146 aa		11.54	□□□□□ -0.56
RAI14-213	ENST00000508777	RGPD1	P0DJD0	1748 aa		11.53	□□□□□ -0.56
RAI14-213	ENST00000508777	WDR17	Q8IZU2	1322 aa		11.53	□□□□□ -0.56
RAI14-213	ENST00000508777	NGLY1	Q96IV0	654 aa		11.53	□□□□□ -0.56
RAI14-213	ENST00000508777	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.52	□□□□□ -0.57
RAI14-213	ENST00000508777	CAMTA1	Q9Y6Y1	1673 aa		11.52	□□□□□ -0.57
RAI14-213	ENST00000508777	COL5A2	P05997	1499 aa	Predicted RBP	11.52	□□□□□ -0.57
RAI14-213	ENST00000508777	CCDC184	Q52MB2	194 aa		11.52	□□□□□ -0.57
RAI14-213	ENST00000508777	LTV1	Q96GA3	475 aa	Predicted RBP	11.52	□□□□□ -0.57
RAI14-213	ENST00000508777	BTG4	Q9NY30	223 aa		11.52	□□□□□ -0.57
RAI14-213	ENST00000508777	IGSF1	Q8N6C5	1336 aa		11.51	□□□□□ -0.57
RAI14-213	ENST00000508777	MAPK8IP3	Q9UPT6	1336 aa		11.51	□□□□□ -0.57
RAI14-213	ENST00000508777	TOM1L2	Q6ZVM7	507 aa		11.51	□□□□□ -0.57
RAI14-213	ENST00000508777	RUNDC1	Q96C34	613 aa		11.51	□□□□□ -0.57

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