RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 ERFEQ4G0M1 354 aa7.9□□□□□ -1.14
SMARCA5-202ENST00000508573 DNMT3LQ9UJW3 386 aa7.9□□□□□ -1.14
SMARCA5-202ENST00000508573 VSIG8P0DPA2 414 aa7.89□□□□□ -1.15
SMARCA5-202ENST00000508573 LRRN4Q8WUT4 740 aa7.89□□□□□ -1.15
SMARCA5-202ENST00000508573 GPKOWQ92917 476 aaPredicted RBP eCLIP7.89□□□□□ -1.15
SMARCA5-202ENST00000508573 ARHGAP9Q9BRR9 750 aa7.89□□□□□ -1.15
SMARCA5-202ENST00000508573 CBLBQ13191 982 aa7.88□□□□□ -1.15
SMARCA5-202ENST00000508573 PPP1R26Q5T8A7 1209 aaPredicted RBP7.88□□□□□ -1.15
SMARCA5-202ENST00000508573 PDXDC2PQ6P474 469 aa7.88□□□□□ -1.15
SMARCA5-202ENST00000508573 ZBTB33Q86T24 672 aa7.88□□□□□ -1.15
SMARCA5-202ENST00000508573 HOMEZQ8IX15 550 aa7.88□□□□□ -1.15
SMARCA5-202ENST00000508573 TTLL8A6PVC2 850 aa7.87□□□□□ -1.15
SMARCA5-202ENST00000508573 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.87□□□□□ -1.155e-19■□□□□ 8.2
SMARCA5-202ENST00000508573 PGPEP1Q9NXJ5 209 aa7.87□□□□□ -1.15
SMARCA5-202ENST00000508573 NR6A1Q15406 480 aa7.86□□□□□ -1.15
SMARCA5-202ENST00000508573 PROCA1Q8NCQ7 364 aaPredicted RBP7.86□□□□□ -1.15
SMARCA5-202ENST00000508573 KCTD15Q96SI1 283 aaPredicted RBP7.86□□□□□ -1.15
SMARCA5-202ENST00000508573 FKBPLQ9UIM3 349 aa7.86□□□□□ -1.15
SMARCA5-202ENST00000508573 GTF3C3Q9Y5Q9 886 aa7.86□□□□□ -1.15
SMARCA5-202ENST00000508573 SKIV2LQ15477 1246 aaKnown RBP7.85□□□□□ -1.15
SMARCA5-202ENST00000508573 GPR161Q8N6U8 529 aaKnown RBP7.85□□□□□ -1.15
SMARCA5-202ENST00000508573 PTSQ03393 145 aa7.84□□□□□ -1.15
SMARCA5-202ENST00000508573 FBXO31Q5XUX0 539 aaPredicted RBP7.84□□□□□ -1.15
SMARCA5-202ENST00000508573 Q6ZVU0 165 aa7.83□□□□□ -1.16
SMARCA5-202ENST00000508573 SLC10A4Q96EP9 437 aa7.83□□□□□ -1.16
SMARCA5-202ENST00000508573 CNTNAP3BQ96NU0 1288 aa7.83□□□□□ -1.16
SMARCA5-202ENST00000508573 CNTNAP3Q9BZ76 1288 aa7.83□□□□□ -1.16
SMARCA5-202ENST00000508573 AP1G2O75843 785 aa7.82□□□□□ -1.16
SMARCA5-202ENST00000508573 RELBQ01201 579 aa7.82□□□□□ -1.16
SMARCA5-202ENST00000508573 PTK2Q05397 1052 aa7.82□□□□□ -1.16
SMARCA5-202ENST00000508573 DHX9Q08211 1270 aaKnown RBP7.82□□□□□ -1.16
SMARCA5-202ENST00000508573 AGBL1Q96MI9 1066 aa7.82□□□□□ -1.16
SMARCA5-202ENST00000508573 SPINT1O43278 529 aa7.81□□□□□ -1.16
SMARCA5-202ENST00000508573 CCDC155Q8N6L0 562 aa7.81□□□□□ -1.16
SMARCA5-202ENST00000508573 FAM117AQ9C073 453 aa7.81□□□□□ -1.16
SMARCA5-202ENST00000508573 CDV3Q9UKY7 258 aaKnown RBP7.81□□□□□ -1.16
SMARCA5-202ENST00000508573 RAB15P59190 212 aa7.8□□□□□ -1.16
SMARCA5-202ENST00000508573 INTS6LQ5JSJ4 861 aaKnown RBP7.8□□□□□ -1.16
SMARCA5-202ENST00000508573 KDM4CQ9H3R0 1056 aa7.8□□□□□ -1.16
SMARCA5-202ENST00000508573 ZNF395Q9H8N7 513 aaPredicted RBP7.8□□□□□ -1.16
SMARCA5-202ENST00000508573 GPBP1L1Q9HC44 474 aaPredicted RBP7.8□□□□□ -1.16
SMARCA5-202ENST00000508573 CTSOP43234 321 aaPredicted RBP7.79□□□□□ -1.16
SMARCA5-202ENST00000508573 KRT76Q01546 638 aa7.79□□□□□ -1.16
SMARCA5-202ENST00000508573 SH3D19Q5HYK7 790 aa7.79□□□□□ -1.16
SMARCA5-202ENST00000508573 PPP2R2DQ66LE6 453 aa7.79□□□□□ -1.16
SMARCA5-202ENST00000508573 VWA5B2Q8N398 1253 aa7.79□□□□□ -1.16
SMARCA5-202ENST00000508573 ADAM32Q8TC27 787 aa7.79□□□□□ -1.16
SMARCA5-202ENST00000508573 OCSTAMPQ9BR26 566 aa7.79□□□□□ -1.16
SMARCA5-202ENST00000508573 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.79□□□□□ -1.16
SMARCA5-202ENST00000508573 COL25A1Q9BXS0 654 aaPredicted RBP7.79□□□□□ -1.16
SMARCA5-202ENST00000508573 EPS8L1Q8TE68 723 aa7.78□□□□□ -1.16
SMARCA5-202ENST00000508573 INSM2Q96T92 566 aaPredicted RBP7.78□□□□□ -1.16
SMARCA5-202ENST00000508573 POLMQ9NP87 494 aaPredicted RBP7.78□□□□□ -1.16
SMARCA5-202ENST00000508573 TMPRSS4Q9NRS4 437 aa7.78□□□□□ -1.16
SMARCA5-202ENST00000508573 ZC3H4Q9UPT8 1303 aaKnown RBP7.78□□□□□ -1.16
SMARCA5-202ENST00000508573 SLC35F4A4IF30 521 aa7.77□□□□□ -1.17
SMARCA5-202ENST00000508573 DDRGK1Q96HY6 314 aa7.77□□□□□ -1.17
SMARCA5-202ENST00000508573 CDC14CA4D256 554 aa7.76□□□□□ -1.17
SMARCA5-202ENST00000508573 KCNMA1Q12791 1236 aa7.76□□□□□ -1.17
SMARCA5-202ENST00000508573 DZIP3Q86Y13 1208 aaKnown RBP7.76□□□□□ -1.17
SMARCA5-202ENST00000508573 NANOS1Q8WY41 292 aaKnown RBP7.76□□□□□ -1.17
SMARCA5-202ENST00000508573 ADAMTS8Q9UP79 889 aa7.76□□□□□ -1.17
SMARCA5-202ENST00000508573 GPSM3Q9Y4H4 160 aa7.76□□□□□ -1.17
SMARCA5-202ENST00000508573 ADD1P35611 737 aaKnown RBP7.75□□□□□ -1.17
SMARCA5-202ENST00000508573 SV2AQ7L0J3 742 aa7.75□□□□□ -1.17
SMARCA5-202ENST00000508573 PNMA1Q8ND90 353 aa7.75□□□□□ -1.17
SMARCA5-202ENST00000508573 ITGA6P23229 1130 aa7.74□□□□□ -1.17
SMARCA5-202ENST00000508573 NBPF20Q3BBV1 942 aa7.74□□□□□ -1.17
SMARCA5-202ENST00000508573 RNFT1Q5M7Z0 435 aa7.74□□□□□ -1.17
SMARCA5-202ENST00000508573 ERICH6Q7L0X2 663 aa7.74□□□□□ -1.17
SMARCA5-202ENST00000508573 KCTD17Q8N5Z5 321 aa7.74□□□□□ -1.17
SMARCA5-202ENST00000508573 ERVH48-1M5A8F1 160 aa7.73□□□□□ -1.17
SMARCA5-202ENST00000508573 ZNF784Q8NCA9 323 aaPredicted RBP7.73□□□□□ -1.17
SMARCA5-202ENST00000508573 HMX1Q9NP08 348 aaPredicted RBP7.73□□□□□ -1.17
SMARCA5-202ENST00000508573 USP17L8P0C7I0 530 aa7.72□□□□□ -1.17
SMARCA5-202ENST00000508573 PTGIRP43119 386 aa7.72□□□□□ -1.17
SMARCA5-202ENST00000508573 TMEM151AQ8N4L1 468 aa7.72□□□□□ -1.17
SMARCA5-202ENST00000508573 LILRA1O75019 489 aa7.71□□□□□ -1.18
SMARCA5-202ENST00000508573 GDF11O95390 407 aa7.71□□□□□ -1.18
SMARCA5-202ENST00000508573 GSK3AP49840 483 aa7.71□□□□□ -1.18
SMARCA5-202ENST00000508573 ZNF385CQ66K41 422 aaPredicted RBP7.71□□□□□ -1.18
SMARCA5-202ENST00000508573 SVOPQ8N4V2 548 aa7.71□□□□□ -1.18
SMARCA5-202ENST00000508573 RNF217Q8TC41 542 aa7.71□□□□□ -1.18
SMARCA5-202ENST00000508573 WHAMMQ8TF30 809 aa7.71□□□□□ -1.18
SMARCA5-202ENST00000508573 ADH1AP07327 375 aa7.7□□□□□ -1.18
SMARCA5-202ENST00000508573 RFC5P40937 340 aa7.7□□□□□ -1.18
SMARCA5-202ENST00000508573 RASSF7Q02833 373 aa7.7□□□□□ -1.18
SMARCA5-202ENST00000508573 RANGAP1P46060 587 aaPredicted RBP7.69□□□□□ -1.18
SMARCA5-202ENST00000508573 LYSMD3Q7Z3D4 306 aa7.69□□□□□ -1.18
SMARCA5-202ENST00000508573 PRICKLE2Q7Z3G6 844 aa7.69□□□□□ -1.18
SMARCA5-202ENST00000508573 KDF1Q8NAX2 398 aaPredicted RBP7.69□□□□□ -1.18
SMARCA5-202ENST00000508573 CYLDQ9NQC7 956 aa7.69□□□□□ -1.18
SMARCA5-202ENST00000508573 SENP3-EIF4A1A0A087X0R7 540 aa7.68□□□□□ -1.18
SMARCA5-202ENST00000508573 TMEM132AQ24JP5 1023 aa7.68□□□□□ -1.18
SMARCA5-202ENST00000508573 FOXD4L5Q5VV16 416 aaPredicted RBP7.68□□□□□ -1.18
SMARCA5-202ENST00000508573 ESPNB1AK53 854 aa7.67□□□□□ -1.18
SMARCA5-202ENST00000508573 GIGYF1O75420 1035 aaPredicted RBP7.67□□□□□ -1.18
SMARCA5-202ENST00000508573 SLURP2P0DP57 97 aa7.67□□□□□ -1.18
SMARCA5-202ENST00000508573 RHOQP17081 205 aa7.67□□□□□ -1.18
SMARCA5-202ENST00000508573 MARSP56192 900 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms