RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 OCSTAMPQ9BR26 566 aa10.3□□□□□ -0.76
GYPA-205ENST00000508337 SIAH2O43255 324 aa10.29□□□□□ -0.76
GYPA-205ENST00000508337 NR5A1Q13285 461 aa10.29□□□□□ -0.76
GYPA-205ENST00000508337 SLFNL1Q499Z3 407 aa10.29□□□□□ -0.76
GYPA-205ENST00000508337 RNF20Q5VTR2 975 aa10.29□□□□□ -0.76
GYPA-205ENST00000508337 J3QL48 77 aa10.28□□□□□ -0.76
GYPA-205ENST00000508337 DHX9Q08211 1270 aaKnown RBP10.28□□□□□ -0.76
GYPA-205ENST00000508337 NNTQ13423 1086 aa10.28□□□□□ -0.76
GYPA-205ENST00000508337 MPNDQ8N594 471 aa10.28□□□□□ -0.76
GYPA-205ENST00000508337 CDK15Q96Q40 435 aa10.28□□□□□ -0.76
GYPA-205ENST00000508337 ESF1Q9H501 851 aaKnown RBP10.28□□□□□ -0.76
GYPA-205ENST00000508337 TOR4AQ9NXH8 423 aa10.28□□□□□ -0.76
GYPA-205ENST00000508337 TRAK2O60296 914 aa10.26□□□□□ -0.77
GYPA-205ENST00000508337 CCDC116Q8IYX3 515 aa10.26□□□□□ -0.77
GYPA-205ENST00000508337 CALR3Q96L12 384 aaKnown RBP10.26□□□□□ -0.77
GYPA-205ENST00000508337 PGPEP1Q9NXJ5 209 aa10.26□□□□□ -0.77
GYPA-205ENST00000508337 POM121CA8CG34 1229 aa10.25□□□□□ -0.77
GYPA-205ENST00000508337 Q6ZNB5 142 aa10.25□□□□□ -0.77
GYPA-205ENST00000508337 RNF135Q8IUD6 432 aa10.25□□□□□ -0.77
GYPA-205ENST00000508337 DGAT1O75907 488 aa10.24□□□□□ -0.77
GYPA-205ENST00000508337 SMPD1P17405 629 aa10.24□□□□□ -0.77
GYPA-205ENST00000508337 INTS6LQ5JSJ4 861 aaKnown RBP10.24□□□□□ -0.77
GYPA-205ENST00000508337 SEPT12Q8IYM1 358 aa10.24□□□□□ -0.77
GYPA-205ENST00000508337 GLMNQ92990 594 aa10.24□□□□□ -0.77
GYPA-205ENST00000508337 WDR4P57081 412 aaKnown RBP10.23□□□□□ -0.77
GYPA-205ENST00000508337 ZNF777Q9ULD5 760 aaPredicted RBP10.23□□□□□ -0.77
GYPA-205ENST00000508337 EMILIN1Q9Y6C2 1016 aa10.23□□□□□ -0.77
GYPA-205ENST00000508337 GIGYF1O75420 1035 aaPredicted RBP10.22□□□□□ -0.77
GYPA-205ENST00000508337 HDGFL1Q5TGJ6 251 aa10.22□□□□□ -0.77
GYPA-205ENST00000508337 CCDC125Q86Z20 511 aa10.22□□□□□ -0.77
GYPA-205ENST00000508337 FNBP4Q8N3X1 1017 aaPredicted RBP10.22□□□□□ -0.77
GYPA-205ENST00000508337 TIMELESSQ9UNS1 1208 aa10.22□□□□□ -0.77
GYPA-205ENST00000508337 CEP126Q9P2H0 1117 aa10.21□□□□□ -0.77
GYPA-205ENST00000508337 PCDHB11Q9Y5F2 797 aa10.21□□□□□ -0.77
GYPA-205ENST00000508337 HPS1Q92902 700 aa10.2□□□□□ -0.78
GYPA-205ENST00000508337 DOLKQ9UPQ8 538 aa10.2□□□□□ -0.78
GYPA-205ENST00000508337 ZIC2O95409 532 aaPredicted RBP10.19□□□□□ -0.78
GYPA-205ENST00000508337 GRM5P41594 1212 aa10.19□□□□□ -0.78
GYPA-205ENST00000508337 PPP1R26Q5T8A7 1209 aaPredicted RBP10.19□□□□□ -0.78
GYPA-205ENST00000508337 CAPN5O15484 640 aaPredicted RBP10.18□□□□□ -0.78
GYPA-205ENST00000508337 MYCP01106 439 aaPredicted RBP10.18□□□□□ -0.78
GYPA-205ENST00000508337 NR3C2P08235 984 aa10.18□□□□□ -0.78
GYPA-205ENST00000508337 CCDC97Q96F63 343 aaPredicted RBP10.18□□□□□ -0.78
GYPA-205ENST00000508337 ESPNB1AK53 854 aa10.17□□□□□ -0.78
GYPA-205ENST00000508337 ERVH48-1M5A8F1 160 aa10.17□□□□□ -0.78
GYPA-205ENST00000508337 AXIN1O15169 862 aa10.17□□□□□ -0.78
GYPA-205ENST00000508337 UPP2O95045 317 aa10.17□□□□□ -0.78
GYPA-205ENST00000508337 SKIP12755 728 aa10.17□□□□□ -0.78
GYPA-205ENST00000508337 MYT1Q01538 1121 aa10.17□□□□□ -0.78
GYPA-205ENST00000508337 CTC1Q2NKJ3 1217 aa10.17□□□□□ -0.78
GYPA-205ENST00000508337 OXLD1Q5BKU9 147 aa10.17□□□□□ -0.78
GYPA-205ENST00000508337 ALG2Q9H553 416 aa10.17□□□□□ -0.78
GYPA-205ENST00000508337 CYLDQ9NQC7 956 aa10.16□□□□□ -0.78
GYPA-205ENST00000508337 ITPKCQ96DU7 683 aa10.15□□□□□ -0.78
GYPA-205ENST00000508337 SIRT1Q96EB6 747 aa10.15□□□□□ -0.78
GYPA-205ENST00000508337 ARID3CA6NKF2 412 aa10.14□□□□□ -0.79
GYPA-205ENST00000508337 TIMP2P16035 220 aa10.14□□□□□ -0.79
GYPA-205ENST00000508337 PLPP7Q8NBV4 271 aa10.14□□□□□ -0.79
GYPA-205ENST00000508337 ZNF784Q8NCA9 323 aaPredicted RBP10.14□□□□□ -0.79
GYPA-205ENST00000508337 ZFAND3Q9H8U3 227 aa10.14□□□□□ -0.79
GYPA-205ENST00000508337 TMPRSS4Q9NRS4 437 aa10.14□□□□□ -0.79
GYPA-205ENST00000508337 EML3Q32P44 896 aa10.13□□□□□ -0.79
GYPA-205ENST00000508337 MAP7D1Q3KQU3 841 aa10.13□□□□□ -0.79
GYPA-205ENST00000508337 AVPP01185 164 aa10.12□□□□□ -0.79
GYPA-205ENST00000508337 SCARF1Q14162 830 aa10.12□□□□□ -0.79
GYPA-205ENST00000508337 CC2D2BQ6DHV5 1058 aa10.12□□□□□ -0.79
GYPA-205ENST00000508337 ADAMTS19Q8TE59 1207 aa10.12□□□□□ -0.79
GYPA-205ENST00000508337 PIK3CDO00329 1044 aa10.11□□□□□ -0.79
GYPA-205ENST00000508337 NFATC2IPQ8NCF5 419 aa10.11□□□□□ -0.79
GYPA-205ENST00000508337 USP17L5A8MUK1 530 aa10.1□□□□□ -0.79
GYPA-205ENST00000508337 ST8SIA5O15466 376 aa10.1□□□□□ -0.79
GYPA-205ENST00000508337 USP4Q13107 963 aa10.1□□□□□ -0.79
GYPA-205ENST00000508337 CYP2U1Q7Z449 544 aa10.1□□□□□ -0.79
GYPA-205ENST00000508337 CCDC85AQ96PX6 553 aaPredicted RBP10.1□□□□□ -0.79
GYPA-205ENST00000508337 SUPT5HO00267 1087 aaKnown RBP10.09□□□□□ -0.79
GYPA-205ENST00000508337 ATP9BO43861 1147 aa10.09□□□□□ -0.79
GYPA-205ENST00000508337 PSME1Q06323 249 aa10.09□□□□□ -0.79
GYPA-205ENST00000508337 SERPINA10Q9UK55 444 aa10.09□□□□□ -0.79
GYPA-205ENST00000508337 BMP2P12643 396 aa10.08□□□□□ -0.8
GYPA-205ENST00000508337 SMCPP49901 116 aaPredicted RBP10.08□□□□□ -0.8
GYPA-205ENST00000508337 CBLBQ13191 982 aa10.08□□□□□ -0.8
GYPA-205ENST00000508337 TRAF7Q6Q0C0 670 aa10.08□□□□□ -0.8
GYPA-205ENST00000508337 DEPDC4Q8N2C3 294 aa10.08□□□□□ -0.8
GYPA-205ENST00000508337 NOD1Q9Y239 953 aa10.08□□□□□ -0.8
GYPA-205ENST00000508337 USP17L3A6NCW0 530 aa10.07□□□□□ -0.8
GYPA-205ENST00000508337 USP17L4A6NCW7 530 aa10.07□□□□□ -0.8
GYPA-205ENST00000508337 LZTS3O60299 673 aaPredicted RBP10.07□□□□□ -0.8
GYPA-205ENST00000508337 ADH1AP07327 375 aa10.07□□□□□ -0.8
GYPA-205ENST00000508337 BMP1P13497 986 aa10.07□□□□□ -0.8
GYPA-205ENST00000508337 RELBQ01201 579 aa10.07□□□□□ -0.8
GYPA-205ENST00000508337 NCOA4Q13772 614 aa10.07□□□□□ -0.8
GYPA-205ENST00000508337 C6orf118Q5T5N4 469 aa10.07□□□□□ -0.8
GYPA-205ENST00000508337 USP17L2Q6R6M4 530 aa10.07□□□□□ -0.8
GYPA-205ENST00000508337 TBC1D9Q6ZT07 1266 aa10.07□□□□□ -0.8
GYPA-205ENST00000508337 USP17L1Q7RTZ2 530 aa10.07□□□□□ -0.8
GYPA-205ENST00000508337 CRIPAKQ8N1N5 446 aa10.07□□□□□ -0.8
GYPA-205ENST00000508337 MEIOBQ8N635 442 aa10.07□□□□□ -0.8
GYPA-205ENST00000508337 TSEN34Q9BSV6 310 aaKnown RBP10.07□□□□□ -0.8
GYPA-205ENST00000508337 RBM19Q9Y4C8 960 aaKnown RBP10.07□□□□□ -0.8
GYPA-205ENST00000508337 PALM3A6NDB9 673 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms