RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 NUTM2FA1L443 756 aa22.21■■□□□ 1.15
TRAPPC11-204ENST00000505676 KIF16BQ96L93 1317 aa22.2■■□□□ 1.14
TRAPPC11-204ENST00000505676 CLUAP1Q96AJ1 413 aa22.2■■□□□ 1.14
TRAPPC11-204ENST00000505676 PIK3C2AO00443 1686 aa22.2■■□□□ 1.14
TRAPPC11-204ENST00000505676 RGPD8O14715 1765 aaPredicted RBP22.19■■□□□ 1.14
TRAPPC11-204ENST00000505676 HMOX1P09601 288 aa22.19■■□□□ 1.14
TRAPPC11-204ENST00000505676 BRPF1P55201 1214 aaPredicted RBP22.19■■□□□ 1.14
TRAPPC11-204ENST00000505676 EXOSC9Q06265 439 aaKnown RBP22.19■■□□□ 1.14
TRAPPC11-204ENST00000505676 EIF4A2Q14240 407 aaKnown RBP22.19■■□□□ 1.14
TRAPPC11-204ENST00000505676 PMFBP1Q8TBY8 1022 aa22.19■■□□□ 1.14
TRAPPC11-204ENST00000505676 FRAT1Q92837 279 aaPredicted RBP22.18■■□□□ 1.14
TRAPPC11-204ENST00000505676 PEAK1Q9H792 1746 aa22.17■■□□□ 1.14
TRAPPC11-204ENST00000505676 IPO8O15397 1037 aaKnown RBP22.17■■□□□ 1.14
TRAPPC11-204ENST00000505676 TSR2Q969E8 191 aaKnown RBP22.17■■□□□ 1.14
TRAPPC11-204ENST00000505676 PHACTR3Q96KR7 559 aa22.17■■□□□ 1.14
TRAPPC11-204ENST00000505676 HAP1P54257 671 aaPredicted RBP22.16■■□□□ 1.14
TRAPPC11-204ENST00000505676 SMC4Q9NTJ3 1288 aa22.16■■□□□ 1.14
TRAPPC11-204ENST00000505676 ZNF853P0CG23 659 aa22.15■■□□□ 1.14
TRAPPC11-204ENST00000505676 RTL1A6NKG5 1358 aa22.15■■□□□ 1.14
TRAPPC11-204ENST00000505676 PHF8Q9UPP1 1060 aa22.14■■□□□ 1.14
TRAPPC11-204ENST00000505676 MAP3K19Q56UN5 1328 aa22.14■■□□□ 1.13
TRAPPC11-204ENST00000505676 DZIP1LQ8IYY4 767 aaKnown RBP22.14■■□□□ 1.13
TRAPPC11-204ENST00000505676 PANK1Q8TE04 598 aa22.13■■□□□ 1.13
TRAPPC11-204ENST00000505676 CFAP44Q96MT7 982 aa22.13■■□□□ 1.13
TRAPPC11-204ENST00000505676 COG6Q9Y2V7 657 aa22.13■■□□□ 1.13
TRAPPC11-204ENST00000505676 MVPQ14764 893 aaKnown RBP22.12■■□□□ 1.13
TRAPPC11-204ENST00000505676 FTSJ3Q8IY81 847 aaKnown RBP22.12■■□□□ 1.13
TRAPPC11-204ENST00000505676 KDRP35968 1356 aa22.12■■□□□ 1.13
TRAPPC11-204ENST00000505676 SULT6B1Q6IMI4 303 aa22.11■■□□□ 1.13
TRAPPC11-204ENST00000505676 NLRP6P59044 892 aa22.11■■□□□ 1.13
TRAPPC11-204ENST00000505676 SSH1Q8WYL5 1049 aa22.11■■□□□ 1.13
TRAPPC11-204ENST00000505676 CHMP4BQ9H444 224 aaKnown RBP22.11■■□□□ 1.13
TRAPPC11-204ENST00000505676 ATF7IPQ6VMQ6 1270 aa22.1■■□□□ 1.13
TRAPPC11-204ENST00000505676 DLG5Q8TDM6 1919 aa22.1■■□□□ 1.13
TRAPPC11-204ENST00000505676 AMPHP49418 695 aa22.1■■□□□ 1.13
TRAPPC11-204ENST00000505676 DDX19BQ9UMR2 479 aa22.1■■□□□ 1.13
TRAPPC11-204ENST00000505676 HSP90AB2PQ58FF8 381 aa22.09■■□□□ 1.13
TRAPPC11-204ENST00000505676 ARHGAP45Q92619 1136 aa22.09■■□□□ 1.13
TRAPPC11-204ENST00000505676 IGSF1Q8N6C5 1336 aa22.08■■□□□ 1.13
TRAPPC11-204ENST00000505676 MARF1Q9Y4F3 1742 aaKnown RBP22.08■■□□□ 1.13
TRAPPC11-204ENST00000505676 BCL2L13Q9BXK5 485 aa22.08■■□□□ 1.13
TRAPPC11-204ENST00000505676 PDE4AP27815 886 aa22.07■■□□□ 1.12
TRAPPC11-204ENST00000505676 ANP32AP39687 249 aaKnown RBP22.07■■□□□ 1.12
TRAPPC11-204ENST00000505676 BACH2Q9BYV9 841 aa22.07■■□□□ 1.12
TRAPPC11-204ENST00000505676 NCOA3Q9Y6Q9 1424 aa22.07■■□□□ 1.12
TRAPPC11-204ENST00000505676 ABTB2Q8N961 1025 aa22.06■■□□□ 1.12
TRAPPC11-204ENST00000505676 RLBP1P12271 317 aa22.06■■□□□ 1.12
TRAPPC11-204ENST00000505676 RWDD1Q9H446 243 aaPredicted RBP22.06■■□□□ 1.12
TRAPPC11-204ENST00000505676 HTATSF1O43719 755 aaKnown RBP22.05■■□□□ 1.12
TRAPPC11-204ENST00000505676 TRIM27P14373 513 aa22.05■■□□□ 1.12
TRAPPC11-204ENST00000505676 KIF1AQ12756 1690 aa22.05■■□□□ 1.12
TRAPPC11-204ENST00000505676 KCNH5Q8NCM2 988 aa22.04■■□□□ 1.12
TRAPPC11-204ENST00000505676 GAS2L2Q8NHY3 880 aa22.04■■□□□ 1.12
TRAPPC11-204ENST00000505676 MBIPQ9NS73 344 aa22.04■■□□□ 1.12
TRAPPC11-204ENST00000505676 VAMP4O75379 141 aa22.04■■□□□ 1.12
TRAPPC11-204ENST00000505676 KIAA0232Q92628 1395 aa22.04■■□□□ 1.12
TRAPPC11-204ENST00000505676 PHRF1Q9P1Y6 1649 aaKnown RBP22.04■■□□□ 1.12
TRAPPC11-204ENST00000505676 AEBP1Q8IUX7 1158 aa22.03■■□□□ 1.12
TRAPPC11-204ENST00000505676 NOB1Q9ULX3 412 aaKnown RBP22.03■■□□□ 1.12
TRAPPC11-204ENST00000505676 LAS1LQ9Y4W2 734 aaKnown RBP22.03■■□□□ 1.12
TRAPPC11-204ENST00000505676 HOXC9P31274 260 aa22.02■■□□□ 1.12
TRAPPC11-204ENST00000505676 DCCP43146 1447 aa22.01■■□□□ 1.11
TRAPPC11-204ENST00000505676 PSME1Q06323 249 aa22■■□□□ 1.11
TRAPPC11-204ENST00000505676 C14orf37Q86TY3 774 aa22■■□□□ 1.11
TRAPPC11-204ENST00000505676 TWISTNBQ3B726 338 aaPredicted RBP22■■□□□ 1.11
TRAPPC11-204ENST00000505676 MST1RQ04912 1400 aa22■■□□□ 1.11
TRAPPC11-204ENST00000505676 CHL1O00533 1208 aa21.99■■□□□ 1.11
TRAPPC11-204ENST00000505676 PAK3O75914 559 aaPredicted RBP21.99■■□□□ 1.11
TRAPPC11-204ENST00000505676 IGHDP01880 384 aa21.99■■□□□ 1.11
TRAPPC11-204ENST00000505676 ESCO1Q5FWF5 840 aa21.99■■□□□ 1.11
TRAPPC11-204ENST00000505676 NFAT5O94916 1531 aa21.99■■□□□ 1.11
TRAPPC11-204ENST00000505676 MRPL50Q8N5N7 158 aaKnown RBP21.99■■□□□ 1.11
TRAPPC11-204ENST00000505676 FAM161AQ3B820 660 aa21.98■■□□□ 1.11
TRAPPC11-204ENST00000505676 RTF1Q92541 710 aaKnown RBP21.98■■□□□ 1.11
TRAPPC11-204ENST00000505676 EYA1Q99502 592 aa21.98■■□□□ 1.11
TRAPPC11-204ENST00000505676 THUMPD2Q9BTF0 503 aaKnown RBP21.98■■□□□ 1.11
TRAPPC11-204ENST00000505676 SOX12O15370 315 aa21.98■■□□□ 1.11
TRAPPC11-204ENST00000505676 HDAC1Q13547 482 aaPredicted RBP21.98■■□□□ 1.11
TRAPPC11-204ENST00000505676 API5Q9BZZ5 524 aaKnown RBP21.97■■□□□ 1.11
TRAPPC11-204ENST00000505676 C19orf44Q9H6X5 657 aa21.97■■□□□ 1.11
TRAPPC11-204ENST00000505676 PROSER2Q86WR7 435 aaPredicted RBP21.96■■□□□ 1.11
TRAPPC11-204ENST00000505676 ITPRIPQ8IWB1 547 aa21.96■■□□□ 1.11
TRAPPC11-204ENST00000505676 IP6K1Q92551 441 aa21.96■■□□□ 1.11
TRAPPC11-204ENST00000505676 SLIT3O75094 1523 aa21.96■■□□□ 1.11
TRAPPC11-204ENST00000505676 CRB1P82279 1406 aa21.96■■□□□ 1.11
TRAPPC11-204ENST00000505676 BABAM1Q9NWV8 329 aa21.96■■□□□ 1.11
TRAPPC11-204ENST00000505676 SOS1Q07889 1333 aaPredicted RBP21.96■■□□□ 1.11
TRAPPC11-204ENST00000505676 TNNQ9UQP3 1299 aa21.95■■□□□ 1.1
TRAPPC11-204ENST00000505676 PCDHB15Q9Y5E8 787 aa21.95■■□□□ 1.1
TRAPPC11-204ENST00000505676 FAM83GA6ND36 823 aa21.94■■□□□ 1.1
TRAPPC11-204ENST00000505676 LTN1O94822 1766 aa21.94■■□□□ 1.1
TRAPPC11-204ENST00000505676 TMEM57Q8N5G2 664 aa21.93■■□□□ 1.1
TRAPPC11-204ENST00000505676 IPO9Q96P70 1041 aaKnown RBP21.93■■□□□ 1.1
TRAPPC11-204ENST00000505676 C1orf167Q5SNV9 1468 aa21.93■■□□□ 1.1
TRAPPC11-204ENST00000505676 LRRC37A3O60309 1634 aa21.93■■□□□ 1.1
TRAPPC11-204ENST00000505676 ZBTB40Q9NUA8 1239 aa21.92■■□□□ 1.1
TRAPPC11-204ENST00000505676 ABCC4O15439 1325 aa21.92■■□□□ 1.1
TRAPPC11-204ENST00000505676 MTHFSDQ2M296 383 aaKnown RBP21.92■■□□□ 1.1
TRAPPC11-204ENST00000505676 ERICH6Q7L0X2 663 aa21.91■■□□□ 1.1
TRAPPC11-204ENST00000505676 TSPYL6Q8N831 410 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms