RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 SLIT3O75094 1523 aa8.49□□□□□ -1.05
GYPB-205ENST00000505583 USP6P35125 1406 aa8.49□□□□□ -1.05
GYPB-205ENST00000505583 APBA3O96018 575 aa8.49□□□□□ -1.05
GYPB-205ENST00000505583 TCP11L2Q8N4U5 519 aa8.49□□□□□ -1.05
GYPB-205ENST00000505583 L3MBTL2Q969R5 705 aa8.49□□□□□ -1.05
GYPB-205ENST00000505583 CABP1Q9NZU7 370 aa8.49□□□□□ -1.05
GYPB-205ENST00000505583 AKAP12Q02952 1782 aa8.48□□□□□ -1.05
GYPB-205ENST00000505583 PDE3BQ13370 1112 aa8.48□□□□□ -1.05
GYPB-205ENST00000505583 PTF1AQ7RTS3 328 aa8.48□□□□□ -1.05
GYPB-205ENST00000505583 NLRP13Q86W25 1043 aa8.48□□□□□ -1.05
GYPB-205ENST00000505583 SIN3AQ96ST3 1273 aa8.48□□□□□ -1.05
GYPB-205ENST00000505583 CRB1P82279 1406 aa8.47□□□□□ -1.05
GYPB-205ENST00000505583 ZBTB7CA1YPR0 619 aa8.47□□□□□ -1.05
GYPB-205ENST00000505583 NLRP6P59044 892 aa8.47□□□□□ -1.05
GYPB-205ENST00000505583 FKBP8Q14318 412 aa8.47□□□□□ -1.05
GYPB-205ENST00000505583 AXIN2Q9Y2T1 843 aa8.47□□□□□ -1.05
GYPB-205ENST00000505583 AATKQ6ZMQ8 1374 aa8.46□□□□□ -1.06
GYPB-205ENST00000505583 PARD3Q8TEW0 1356 aa8.46□□□□□ -1.06
GYPB-205ENST00000505583 THRAP3Q9Y2W1 955 aaKnown RBP8.45□□□□□ -1.06
GYPB-205ENST00000505583 BRD4O60885 1362 aaPredicted RBP8.45□□□□□ -1.06
GYPB-205ENST00000505583 RGPD3A6NKT7 1758 aaPredicted RBP8.45□□□□□ -1.06
GYPB-205ENST00000505583 RGPD4Q7Z3J3 1758 aa8.45□□□□□ -1.06
GYPB-205ENST00000505583 MON2Q7Z3U7 1717 aa8.44□□□□□ -1.06
GYPB-205ENST00000505583 CASZ1Q86V15 1759 aa8.44□□□□□ -1.06
GYPB-205ENST00000505583 SOX12O15370 315 aa8.44□□□□□ -1.06
GYPB-205ENST00000505583 TTC21BQ7Z4L5 1316 aa8.44□□□□□ -1.06
GYPB-205ENST00000505583 CPSF1Q10570 1443 aaKnown RBP8.44□□□□□ -1.06
GYPB-205ENST00000505583 NFAT5O94916 1531 aa8.44□□□□□ -1.06
GYPB-205ENST00000505583 NEUROD1Q13562 356 aa8.43□□□□□ -1.06
GYPB-205ENST00000505583 TOM1L2Q6ZVM7 507 aa8.43□□□□□ -1.06
GYPB-205ENST00000505583 ARHGEF25Q86VW2 580 aa8.43□□□□□ -1.06
GYPB-205ENST00000505583 MARCH10Q8NA82 808 aaPredicted RBP8.43□□□□□ -1.06
GYPB-205ENST00000505583 PDGFDQ9GZP0 370 aaPredicted RBP8.43□□□□□ -1.06
GYPB-205ENST00000505583 ZNF219Q9P2Y4 722 aaPredicted RBP8.43□□□□□ -1.06
GYPB-205ENST00000505583 EVC2Q86UK5 1308 aa8.43□□□□□ -1.06
GYPB-205ENST00000505583 WDR17Q8IZU2 1322 aa8.43□□□□□ -1.06
GYPB-205ENST00000505583 OVOS2A0A0G2JMS6 1433 aa8.43□□□□□ -1.06
GYPB-205ENST00000505583 OVOS2A0A0J9YW53 1432 aa8.43□□□□□ -1.06
GYPB-205ENST00000505583 OVOS2Q6IE36 1432 aa8.43□□□□□ -1.06
GYPB-205ENST00000505583 DDB1Q16531 1140 aa8.42□□□□□ -1.06
GYPB-205ENST00000505583 PROM2Q8N271 834 aa8.42□□□□□ -1.06
GYPB-205ENST00000505583 ANO8Q9HCE9 1232 aaPredicted RBP8.42□□□□□ -1.06
GYPB-205ENST00000505583 ROCK2O75116 1388 aaKnown RBP8.42□□□□□ -1.06
GYPB-205ENST00000505583 LTN1O94822 1766 aa8.42□□□□□ -1.06
GYPB-205ENST00000505583 CD163L1Q9NR16 1453 aa8.41□□□□□ -1.06
GYPB-205ENST00000505583 NBPF14Q5TI25 921 aa8.41□□□□□ -1.06
GYPB-205ENST00000505583 USP54Q70EL1 1684 aa8.4□□□□□ -1.06
GYPB-205ENST00000505583 KTN1Q86UP2 1357 aaKnown RBP8.4□□□□□ -1.06
GYPB-205ENST00000505583 PLSCR1O15162 318 aa8.4□□□□□ -1.06
GYPB-205ENST00000505583 BCL11BQ9C0K0 894 aaPredicted RBP8.4□□□□□ -1.06
GYPB-205ENST00000505583 SPINK5Q9NQ38 1064 aaPredicted RBP8.4□□□□□ -1.06
GYPB-205ENST00000505583 MYOM1P52179 1685 aa8.4□□□□□ -1.07
GYPB-205ENST00000505583 TTC21AQ8NDW8 1320 aa8.39□□□□□ -1.07
GYPB-205ENST00000505583 KCNQ2O43526 872 aa8.39□□□□□ -1.07
GYPB-205ENST00000505583 NME9Q86XW9 330 aa8.39□□□□□ -1.07
GYPB-205ENST00000505583 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.39□□□□□ -1.07
GYPB-205ENST00000505583 ZNF692Q9BU19 519 aaPredicted RBP8.39□□□□□ -1.07
GYPB-205ENST00000505583 CARD10Q9BWT7 1032 aa8.39□□□□□ -1.07
GYPB-205ENST00000505583 SPON1Q9HCB6 807 aa8.39□□□□□ -1.07
GYPB-205ENST00000505583 NHSQ6T4R5 1651 aa8.39□□□□□ -1.07
GYPB-205ENST00000505583 BCL9O00512 1426 aa8.38□□□□□ -1.07
GYPB-205ENST00000505583 SBNO2Q9Y2G9 1366 aa8.38□□□□□ -1.07
GYPB-205ENST00000505583 CSB-PGBD3P0DP91 1061 aa8.38□□□□□ -1.07
GYPB-205ENST00000505583 KCNH5Q8NCM2 988 aa8.38□□□□□ -1.07
GYPB-205ENST00000505583 USP31Q70CQ4 1352 aa8.37□□□□□ -1.07
GYPB-205ENST00000505583 C11orf95C9JLR9 678 aaPredicted RBP8.37□□□□□ -1.07
GYPB-205ENST00000505583 ZBTB7AO95365 584 aa8.37□□□□□ -1.07
GYPB-205ENST00000505583 TXNRD1Q16881 649 aa8.37□□□□□ -1.07
GYPB-205ENST00000505583 CDCA7Q9BWT1 371 aaPredicted RBP8.37□□□□□ -1.07
GYPB-205ENST00000505583 SLC12A5Q9H2X9 1139 aa8.37□□□□□ -1.07
GYPB-205ENST00000505583 BTAF1O14981 1849 aa8.37□□□□□ -1.07
GYPB-205ENST00000505583 ABCC6O95255 1503 aa8.37□□□□□ -1.07
GYPB-205ENST00000505583 TNS2Q63HR2 1409 aa8.37□□□□□ -1.07
GYPB-205ENST00000505583 PAPPAQ13219 1627 aa8.36□□□□□ -1.07
GYPB-205ENST00000505583 ERBB3P21860 1342 aa8.36□□□□□ -1.07
GYPB-205ENST00000505583 RGPD2P0DJD1 1756 aa8.36□□□□□ -1.07
GYPB-205ENST00000505583 EXOC5O00471 708 aa8.36□□□□□ -1.07
GYPB-205ENST00000505583 PTGER2P43116 358 aa8.36□□□□□ -1.07
GYPB-205ENST00000505583 PPP1R1BQ9UD71 204 aaPredicted RBP8.36□□□□□ -1.07
GYPB-205ENST00000505583 CCDC7Q96M83 1385 aa8.35□□□□□ -1.07
GYPB-205ENST00000505583 NINLQ9Y2I6 1382 aa8.35□□□□□ -1.07
GYPB-205ENST00000505583 YY1P25490 414 aa8.35□□□□□ -1.07
GYPB-205ENST00000505583 TMC1Q8TDI8 760 aa8.35□□□□□ -1.07
GYPB-205ENST00000505583 ACSBG1Q96GR2 724 aa8.35□□□□□ -1.07
GYPB-205ENST00000505583 CARD11Q9BXL7 1154 aa8.35□□□□□ -1.07
GYPB-205ENST00000505583 NLRP2Q9NX02 1062 aa8.35□□□□□ -1.07
GYPB-205ENST00000505583 A0A1W2PP64 1363 aa8.35□□□□□ -1.07
GYPB-205ENST00000505583 SHANK3Q9BYB0 1731 aa8.34□□□□□ -1.07
GYPB-205ENST00000505583 FBLN1P23142 703 aa8.34□□□□□ -1.07
GYPB-205ENST00000505583 DSG3P32926 999 aa8.34□□□□□ -1.07
GYPB-205ENST00000505583 SLC15A2Q16348 729 aa8.34□□□□□ -1.07
GYPB-205ENST00000505583 EDC4Q6P2E9 1401 aaKnown RBP8.33□□□□□ -1.08
GYPB-205ENST00000505583 ANKRD24Q8TF21 1146 aa8.33□□□□□ -1.08
GYPB-205ENST00000505583 SGIP1Q9BQI5 828 aa8.33□□□□□ -1.08
GYPB-205ENST00000505583 TUBGCP6Q96RT7 1819 aa8.33□□□□□ -1.08
GYPB-205ENST00000505583 FAM208AQ9UK61 1670 aaKnown RBP8.33□□□□□ -1.08
GYPB-205ENST00000505583 KAT6BQ8WYB5 2073 aa8.33□□□□□ -1.08
GYPB-205ENST00000505583 IL2RBP14784 551 aa8.32□□□□□ -1.08
GYPB-205ENST00000505583 ZNF827Q17R98 1081 aa8.32□□□□□ -1.08
GYPB-205ENST00000505583 TESK2Q96S53 571 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms