RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 MYOM1P52179 1685 aa19.88■□□□□ 0.77
HOXC9-202ENST00000504557 CSB-PGBD3P0DP91 1061 aa19.88■□□□□ 0.77
HOXC9-202ENST00000504557 ARHGEF25Q86VW2 580 aa19.88■□□□□ 0.77
HOXC9-202ENST00000504557 SF3B2Q13435 895 aaKnown RBP19.87■□□□□ 0.77
HOXC9-202ENST00000504557 CDCA8Q53HL2 280 aa19.87■□□□□ 0.77
HOXC9-202ENST00000504557 TCP11L2Q8N4U5 519 aa19.87■□□□□ 0.77
HOXC9-202ENST00000504557 CRB1P82279 1406 aa19.86■□□□□ 0.77
HOXC9-202ENST00000504557 USP31Q70CQ4 1352 aa19.86■□□□□ 0.77
HOXC9-202ENST00000504557 ANKRD36BQ8N2N9 1353 aa19.86■□□□□ 0.77
HOXC9-202ENST00000504557 KIF20BQ96Q89 1820 aa19.86■□□□□ 0.77
HOXC9-202ENST00000504557 WNK3Q9BYP7 1800 aa19.85■□□□□ 0.77
HOXC9-202ENST00000504557 BLMP54132 1417 aaPredicted RBP19.85■□□□□ 0.77
HOXC9-202ENST00000504557 HSPA5P11021 654 aaKnown RBP19.84■□□□□ 0.77
HOXC9-202ENST00000504557 EIF4G2P78344 907 aaKnown RBP eCLIP19.84■□□□□ 0.77
HOXC9-202ENST00000504557 DEFB132Q7Z7B7 95 aa19.84■□□□□ 0.77
HOXC9-202ENST00000504557 PDE3BQ13370 1112 aa19.83■□□□□ 0.77
HOXC9-202ENST00000504557 BARGINQ6ZT62 677 aa19.83■□□□□ 0.77
HOXC9-202ENST00000504557 CCDC125Q86Z20 511 aa19.83■□□□□ 0.77
HOXC9-202ENST00000504557 COG3Q96JB2 828 aa19.83■□□□□ 0.77
HOXC9-202ENST00000504557 OVOS2A0A0J9YW53 1432 aa19.83■□□□□ 0.76
HOXC9-202ENST00000504557 OVOS2Q6IE36 1432 aa19.83■□□□□ 0.76
HOXC9-202ENST00000504557 RGPD1P0DJD0 1748 aa19.82■□□□□ 0.76
HOXC9-202ENST00000504557 WDR17Q8IZU2 1322 aa19.82■□□□□ 0.76
HOXC9-202ENST00000504557 PARP4Q9UKK3 1724 aaKnown RBP19.82■□□□□ 0.76
HOXC9-202ENST00000504557 FBLN1P23142 703 aa19.81■□□□□ 0.76
HOXC9-202ENST00000504557 GGNBP2Q9H3C7 697 aa19.81■□□□□ 0.76
HOXC9-202ENST00000504557 THRAP3Q9Y2W1 955 aaKnown RBP19.8■□□□□ 0.76
HOXC9-202ENST00000504557 LTV1Q96GA3 475 aaPredicted RBP19.79■□□□□ 0.76
HOXC9-202ENST00000504557 LRRC37A3O60309 1634 aa19.79■□□□□ 0.76
HOXC9-202ENST00000504557 NLRP2Q9NX02 1062 aa19.78■□□□□ 0.76
HOXC9-202ENST00000504557 TNS1Q9HBL0 1735 aaKnown RBP19.78■□□□□ 0.76
HOXC9-202ENST00000504557 NSD3Q9BZ95 1437 aa19.77■□□□□ 0.76
HOXC9-202ENST00000504557 TRIM37O94972 964 aa19.77■□□□□ 0.76
HOXC9-202ENST00000504557 RGPD2P0DJD1 1756 aa19.77■□□□□ 0.76
HOXC9-202ENST00000504557 KAT6BQ8WYB5 2073 aa19.77■□□□□ 0.75
HOXC9-202ENST00000504557 ABCC6O95255 1503 aa19.76■□□□□ 0.75
HOXC9-202ENST00000504557 FYB1O15117 783 aa19.76■□□□□ 0.75
HOXC9-202ENST00000504557 FAM196AQ6ZSG2 479 aa19.76■□□□□ 0.75
HOXC9-202ENST00000504557 ANKRD24Q8TF21 1146 aa19.76■□□□□ 0.75
HOXC9-202ENST00000504557 BAG6P46379 1132 aa19.75■□□□□ 0.75
HOXC9-202ENST00000504557 AMPHP49418 695 aa19.75■□□□□ 0.75
HOXC9-202ENST00000504557 DDB1Q16531 1140 aa19.75■□□□□ 0.75
HOXC9-202ENST00000504557 CARD14Q9BXL6 1004 aa19.75■□□□□ 0.75
HOXC9-202ENST00000504557 RRS1Q15050 365 aaKnown RBP19.74■□□□□ 0.75
HOXC9-202ENST00000504557 CARD10Q9BWT7 1032 aa19.74■□□□□ 0.75
HOXC9-202ENST00000504557 ERBB3P21860 1342 aa19.74■□□□□ 0.75
HOXC9-202ENST00000504557 MAP3K19Q56UN5 1328 aa19.74■□□□□ 0.75
HOXC9-202ENST00000504557 EN1Q05925 392 aaPredicted RBP19.73■□□□□ 0.75
HOXC9-202ENST00000504557 SBF2Q86WG5 1849 aa19.72■□□□□ 0.75
HOXC9-202ENST00000504557 IP6K1Q92551 441 aa19.71■□□□□ 0.75
HOXC9-202ENST00000504557 CCDC7Q96M83 1385 aa19.7■□□□□ 0.74
HOXC9-202ENST00000504557 HOXC9P31274 260 aa19.7■□□□□ 0.74
HOXC9-202ENST00000504557 FAM208AQ9UK61 1670 aaKnown RBP19.7■□□□□ 0.74
HOXC9-202ENST00000504557 MAP2P11137 1827 aaKnown RBP19.69■□□□□ 0.74
HOXC9-202ENST00000504557 APBA3O96018 575 aa19.69■□□□□ 0.74
HOXC9-202ENST00000504557 PEAK1Q9H792 1746 aa19.68■□□□□ 0.74
HOXC9-202ENST00000504557 C11orf95C9JLR9 678 aaPredicted RBP19.68■□□□□ 0.74
HOXC9-202ENST00000504557 CDCA7Q9BWT1 371 aaPredicted RBP19.68■□□□□ 0.74
HOXC9-202ENST00000504557 OVOS2A0A0G2JMS6 1433 aa19.68■□□□□ 0.74
HOXC9-202ENST00000504557 EXOC5O00471 708 aa19.67■□□□□ 0.74
HOXC9-202ENST00000504557 PPM1GO15355 546 aaPredicted RBP19.67■□□□□ 0.74
HOXC9-202ENST00000504557 DISP2A7MBM2 1401 aa19.67■□□□□ 0.74
HOXC9-202ENST00000504557 ANKRD26Q9UPS8 1709 aa19.66■□□□□ 0.74
HOXC9-202ENST00000504557 TNNT2P45379 298 aaPredicted RBP19.66■□□□□ 0.74
HOXC9-202ENST00000504557 EZH2Q15910 746 aaKnown RBP19.66■□□□□ 0.74
HOXC9-202ENST00000504557 MARCH10Q8NA82 808 aaPredicted RBP19.66■□□□□ 0.74
HOXC9-202ENST00000504557 PANK3Q9H999 370 aa19.66■□□□□ 0.74
HOXC9-202ENST00000504557 CGNL1Q0VF96 1302 aa19.66■□□□□ 0.74
HOXC9-202ENST00000504557 IL2RBP14784 551 aa19.65■□□□□ 0.74
HOXC9-202ENST00000504557 TNS2Q63HR2 1409 aa19.63■□□□□ 0.73
HOXC9-202ENST00000504557 PSDA5PKW4 1024 aaPredicted RBP19.63■□□□□ 0.73
HOXC9-202ENST00000504557 USHBP1Q8N6Y0 703 aa19.63■□□□□ 0.73
HOXC9-202ENST00000504557 EMILIN1Q9Y6C2 1016 aa19.63■□□□□ 0.73
HOXC9-202ENST00000504557 RTL1A6NKG5 1358 aa19.62■□□□□ 0.73
HOXC9-202ENST00000504557 SMG6Q86US8 1419 aaKnown RBP19.61■□□□□ 0.73
HOXC9-202ENST00000504557 HSP90AB2PQ58FF8 381 aa19.61■□□□□ 0.73
HOXC9-202ENST00000504557 PTF1AQ7RTS3 328 aa19.61■□□□□ 0.73
HOXC9-202ENST00000504557 ACSBG1Q96GR2 724 aa19.6■□□□□ 0.73
HOXC9-202ENST00000504557 FLT4P35916 1363 aa19.59■□□□□ 0.73
HOXC9-202ENST00000504557 KIF7Q2M1P5 1343 aa19.59■□□□□ 0.73
HOXC9-202ENST00000504557 DDX54Q8TDD1 881 aaKnown RBP19.59■□□□□ 0.73
HOXC9-202ENST00000504557 CAMKK2Q96RR4 588 aa19.59■□□□□ 0.73
HOXC9-202ENST00000504557 NUP188Q5SRE5 1749 aa19.59■□□□□ 0.73
HOXC9-202ENST00000504557 RREB1Q92766 1687 aa19.59■□□□□ 0.73
HOXC9-202ENST00000504557 NBPF6Q5VWK0 638 aa19.58■□□□□ 0.72
HOXC9-202ENST00000504557 NBPF4Q96M43 638 aa19.58■□□□□ 0.72
HOXC9-202ENST00000504557 INSRP06213 1382 aa19.57■□□□□ 0.72
HOXC9-202ENST00000504557 R3HDM1Q15032 1099 aaKnown RBP19.56■□□□□ 0.72
HOXC9-202ENST00000504557 KCNQ2O43526 872 aa19.55■□□□□ 0.72
HOXC9-202ENST00000504557 CNGB1Q14028 1251 aaPredicted RBP19.55■□□□□ 0.72
HOXC9-202ENST00000504557 SHANK3Q9BYB0 1731 aa19.55■□□□□ 0.72
HOXC9-202ENST00000504557 BCL11BQ9C0K0 894 aaPredicted RBP19.55■□□□□ 0.72
HOXC9-202ENST00000504557 KNSTRNQ9Y448 316 aa19.55■□□□□ 0.72
HOXC9-202ENST00000504557 NHSQ6T4R5 1651 aa19.55■□□□□ 0.72
HOXC9-202ENST00000504557 MEGF6O75095 1541 aa19.55■□□□□ 0.72
HOXC9-202ENST00000504557 BTAF1O14981 1849 aa19.53■□□□□ 0.72
HOXC9-202ENST00000504557 RAPGEF4Q8WZA2 1011 aa19.53■□□□□ 0.72
HOXC9-202ENST00000504557 DOT1LQ8TEK3 1739 aa19.53■□□□□ 0.72
HOXC9-202ENST00000504557 MORC1Q86VD1 984 aa19.52■□□□□ 0.72
HOXC9-202ENST00000504557 POLKQ9UBT6 870 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms