RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 DLC1Q96QB1 1528 aa13.38□□□□□ -0.27
DHFR-202ENST00000504396 ANKARQ7Z5J8 1434 aa13.37□□□□□ -0.27
DHFR-202ENST00000504396 POTEB2H3BUK9 544 aa13.37□□□□□ -0.27
DHFR-202ENST00000504396 GPRASP1Q5JY77 1395 aa13.37□□□□□ -0.27
DHFR-202ENST00000504396 ADGRB2O60241 1585 aa13.36□□□□□ -0.27
DHFR-202ENST00000504396 COL14A1Q05707 1796 aaKnown RBP13.36□□□□□ -0.27
DHFR-202ENST00000504396 TRPM3Q9HCF6 1732 aaPredicted RBP13.36□□□□□ -0.27
DHFR-202ENST00000504396 MINK1Q8N4C8 1332 aaPredicted RBP13.35□□□□□ -0.27
DHFR-202ENST00000504396 RGPD1P0DJD0 1748 aa13.35□□□□□ -0.27
DHFR-202ENST00000504396 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
DHFR-202ENST00000504396 RIOK3O14730 519 aaKnown RBP13.35□□□□□ -0.27
DHFR-202ENST00000504396 TRAK1Q9UPV9 953 aa13.35□□□□□ -0.27
DHFR-202ENST00000504396 EIF3AQ14152 1382 aaKnown RBP13.34□□□□□ -0.27
DHFR-202ENST00000504396 ONECUT3O60422 494 aaPredicted RBP13.34□□□□□ -0.27
DHFR-202ENST00000504396 FAM182BQ5T319 152 aa13.34□□□□□ -0.27
DHFR-202ENST00000504396 IER5LQ5T953 404 aa13.34□□□□□ -0.27
DHFR-202ENST00000504396 ALS2Q96Q42 1657 aa13.34□□□□□ -0.27
DHFR-202ENST00000504396 NGDNQ8NEJ9 315 aaKnown RBP13.33□□□□□ -0.28
DHFR-202ENST00000504396 COLQQ9Y215 455 aaPredicted RBP13.33□□□□□ -0.28
DHFR-202ENST00000504396 TULP4Q9NRJ4 1543 aa13.32□□□□□ -0.28
DHFR-202ENST00000504396 SEC24BO95487 1268 aa13.32□□□□□ -0.28
DHFR-202ENST00000504396 EN1Q05925 392 aaPredicted RBP13.32□□□□□ -0.28
DHFR-202ENST00000504396 PRDM11Q9NQV5 511 aa13.32□□□□□ -0.28
DHFR-202ENST00000504396 HRCP23327 699 aa13.31□□□□□ -0.28
DHFR-202ENST00000504396 KDM2AQ9Y2K7 1162 aa13.31□□□□□ -0.28
DHFR-202ENST00000504396 ADGRB1O14514 1584 aa13.31□□□□□ -0.28
DHFR-202ENST00000504396 ITSN1Q15811 1721 aa13.3□□□□□ -0.28
DHFR-202ENST00000504396 GOLGA2Q08379 1002 aa13.3□□□□□ -0.28
DHFR-202ENST00000504396 R3HDM1Q15032 1099 aaKnown RBP13.3□□□□□ -0.28
DHFR-202ENST00000504396 STAC3Q96MF2 364 aa13.3□□□□□ -0.28
DHFR-202ENST00000504396 SPATA31A5Q5VU36 1347 aa13.29□□□□□ -0.28
DHFR-202ENST00000504396 SPATA31A7Q8IWB4 1347 aa13.29□□□□□ -0.28
DHFR-202ENST00000504396 PRR36Q9H6K5 1346 aa13.29□□□□□ -0.28
DHFR-202ENST00000504396 TNS1Q9HBL0 1735 aaKnown RBP13.29□□□□□ -0.28
DHFR-202ENST00000504396 CRYBG1Q9Y4K1 1723 aa13.29□□□□□ -0.28
DHFR-202ENST00000504396 THSD7AQ9UPZ6 1657 aa13.29□□□□□ -0.28
DHFR-202ENST00000504396 STRN4Q9NRL3 753 aa13.29□□□□□ -0.28
DHFR-202ENST00000504396 WASLO00401 505 aaPredicted RBP13.28□□□□□ -0.28
DHFR-202ENST00000504396 USP35Q9P2H5 1018 aa13.28□□□□□ -0.28
DHFR-202ENST00000504396 RGL2O15211 777 aa13.27□□□□□ -0.29
DHFR-202ENST00000504396 CHRNA2Q15822 529 aa13.27□□□□□ -0.29
DHFR-202ENST00000504396 DCAF11Q8TEB1 546 aa13.27□□□□□ -0.29
DHFR-202ENST00000504396 CABP2Q9NPB3 220 aa13.27□□□□□ -0.29
DHFR-202ENST00000504396 PHRF1Q9P1Y6 1649 aaKnown RBP13.27□□□□□ -0.29
DHFR-202ENST00000504396 KIAA0232Q92628 1395 aa13.27□□□□□ -0.29
DHFR-202ENST00000504396 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
DHFR-202ENST00000504396 IRX5P78411 483 aaPredicted RBP13.26□□□□□ -0.29
DHFR-202ENST00000504396 EZH2Q15910 746 aaKnown RBP13.26□□□□□ -0.29
DHFR-202ENST00000504396 NUTM2GQ5VZR2 741 aa13.26□□□□□ -0.29
DHFR-202ENST00000504396 RAB3GAP2Q9H2M9 1393 aa13.26□□□□□ -0.29
DHFR-202ENST00000504396 ARHGEF28Q8N1W1 1705 aaKnown RBP13.25□□□□□ -0.29
DHFR-202ENST00000504396 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.25□□□□□ -0.29
DHFR-202ENST00000504396 TRIM37O94972 964 aa13.25□□□□□ -0.29
DHFR-202ENST00000504396 ZC3H6P61129 1189 aaKnown RBP13.25□□□□□ -0.29
DHFR-202ENST00000504396 MKRN3Q13064 507 aaKnown RBP13.25□□□□□ -0.29
DHFR-202ENST00000504396 ZFP91Q96JP5 570 aaPredicted RBP13.25□□□□□ -0.29
DHFR-202ENST00000504396 PLCG2P16885 1265 aa13.24□□□□□ -0.29
DHFR-202ENST00000504396 EVA1CP58658 441 aa13.24□□□□□ -0.29
DHFR-202ENST00000504396 SPATA31A1Q5TZJ5 1347 aa13.24□□□□□ -0.29
DHFR-202ENST00000504396 DISP2A7MBM2 1401 aa13.23□□□□□ -0.29
DHFR-202ENST00000504396 ATP7BP35670 1465 aa13.23□□□□□ -0.29
DHFR-202ENST00000504396 FAM196AQ6ZSG2 479 aa13.23□□□□□ -0.29
DHFR-202ENST00000504396 APBA3O96018 575 aa13.22□□□□□ -0.29
DHFR-202ENST00000504396 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
DHFR-202ENST00000504396 NUDT16Q96DE0 195 aaKnown RBP13.22□□□□□ -0.29
DHFR-202ENST00000504396 OTUD5Q96G74 571 aa13.22□□□□□ -0.29
DHFR-202ENST00000504396 OCEL1Q9H607 264 aa13.21□□□□□ -0.3
DHFR-202ENST00000504396 SSH2Q76I76 1423 aa13.2□□□□□ -0.3
DHFR-202ENST00000504396 NRKQ7Z2Y5 1582 aa13.2□□□□□ -0.3
DHFR-202ENST00000504396 TOPAZ1Q8N9V7 1692 aa13.19□□□□□ -0.3
DHFR-202ENST00000504396 ZBTB7CA1YPR0 619 aa13.19□□□□□ -0.3
DHFR-202ENST00000504396 ABTB2Q8N961 1025 aa13.19□□□□□ -0.3
DHFR-202ENST00000504396 CAMKK2Q96RR4 588 aa13.19□□□□□ -0.3
DHFR-202ENST00000504396 CDK19Q9BWU1 502 aa13.19□□□□□ -0.3
DHFR-202ENST00000504396 RREB1Q92766 1687 aa13.19□□□□□ -0.3
DHFR-202ENST00000504396 PARD3Q8TEW0 1356 aa13.18□□□□□ -0.3
DHFR-202ENST00000504396 ACEP12821 1306 aa13.18□□□□□ -0.3
DHFR-202ENST00000504396 NUP188Q5SRE5 1749 aa13.18□□□□□ -0.3
DHFR-202ENST00000504396 NBPF8Q3BBV2 869 aa13.18□□□□□ -0.3
DHFR-202ENST00000504396 NBPF14Q5TI25 921 aa13.18□□□□□ -0.3
DHFR-202ENST00000504396 LARP1Q6PKG0 1096 aaKnown RBP13.18□□□□□ -0.3
DHFR-202ENST00000504396 TAOK2Q9UL54 1235 aa13.18□□□□□ -0.3
DHFR-202ENST00000504396 KIAA1210Q9ULL0 1709 aa13.17□□□□□ -0.3
DHFR-202ENST00000504396 TCP11L2Q8N4U5 519 aa13.17□□□□□ -0.3
DHFR-202ENST00000504396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.17□□□□□ -0.37e-43■■□□□ 14
DHFR-202ENST00000504396 PPP1R1BQ9UD71 204 aaPredicted RBP13.17□□□□□ -0.3
DHFR-202ENST00000504396 BARGINQ6ZT62 677 aa13.16□□□□□ -0.3
DHFR-202ENST00000504396 EFCAB3Q8N7B9 438 aa13.16□□□□□ -0.3
DHFR-202ENST00000504396 POLR3AO14802 1390 aaPredicted RBP13.16□□□□□ -0.3
DHFR-202ENST00000504396 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
DHFR-202ENST00000504396 SRPK2P78362 688 aaKnown RBP13.15□□□□□ -0.3
DHFR-202ENST00000504396 PDCD7Q8N8D1 485 aaKnown RBP13.15□□□□□ -0.3
DHFR-202ENST00000504396 LMO7Q8WWI1 1683 aa13.14□□□□□ -0.31
DHFR-202ENST00000504396 BCL11BQ9C0K0 894 aaPredicted RBP13.14□□□□□ -0.31
DHFR-202ENST00000504396 YY1P25490 414 aa13.13□□□□□ -0.31
DHFR-202ENST00000504396 PPIP5K1Q6PFW1 1433 aa13.13□□□□□ -0.31
DHFR-202ENST00000504396 STK25O00506 426 aa13.13□□□□□ -0.31
DHFR-202ENST00000504396 MAMSTRQ6ZN01 415 aa13.13□□□□□ -0.31
DHFR-202ENST00000504396 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
DHFR-202ENST00000504396 STK24Q9Y6E0 443 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms