RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 PNNQ9H307 717 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-207ENST00000503974 KTN1Q86UP2 1357 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-207ENST00000503974 PIP4K2BP78356 416 aa12.44□□□□□ -0.42
PDLIM5-207ENST00000503974 HDGFL2Q7Z4V5 671 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-207ENST00000503974 PIK3C2AO00443 1686 aa12.43□□□□□ -0.42
PDLIM5-207ENST00000503974 SMAP1Q8IYB5 467 aaPredicted RBP12.43□□□□□ -0.42
PDLIM5-207ENST00000503974 POLR3GLQ9BT43 218 aa12.43□□□□□ -0.42
PDLIM5-207ENST00000503974 TNS3Q68CZ2 1445 aa12.43□□□□□ -0.42
PDLIM5-207ENST00000503974 FBXO41Q8TF61 875 aa12.42□□□□□ -0.42
PDLIM5-207ENST00000503974 DDX17Q92841 729 aaKnown RBP12.42□□□□□ -0.42
PDLIM5-207ENST00000503974 KCNG1Q9UIX4 513 aa12.42□□□□□ -0.42
PDLIM5-207ENST00000503974 KIF20BQ96Q89 1820 aa12.42□□□□□ -0.42
PDLIM5-207ENST00000503974 MARF1Q9Y4F3 1742 aaKnown RBP12.42□□□□□ -0.42
PDLIM5-207ENST00000503974 MED1Q15648 1581 aaPredicted RBP12.42□□□□□ -0.42
PDLIM5-207ENST00000503974 COL22A1Q8NFW1 1626 aaPredicted RBP12.42□□□□□ -0.42
PDLIM5-207ENST00000503974 CNPY4Q8N129 248 aa12.42□□□□□ -0.42
PDLIM5-207ENST00000503974 CARD14Q9BXL6 1004 aa12.42□□□□□ -0.42
PDLIM5-207ENST00000503974 LAS1LQ9Y4W2 734 aaKnown RBP12.42□□□□□ -0.42
PDLIM5-207ENST00000503974 CRYBG1Q9Y4K1 1723 aa12.42□□□□□ -0.42
PDLIM5-207ENST00000503974 NSD3Q9BZ95 1437 aa12.41□□□□□ -0.42
PDLIM5-207ENST00000503974 CLCN1P35523 988 aa12.41□□□□□ -0.42
PDLIM5-207ENST00000503974 KRT28Q7Z3Y7 464 aa12.41□□□□□ -0.42
PDLIM5-207ENST00000503974 PANK3Q9H999 370 aa12.41□□□□□ -0.42
PDLIM5-207ENST00000503974 SHPRHQ149N8 1683 aa12.41□□□□□ -0.42
PDLIM5-207ENST00000503974 ANKRD26Q9UPS8 1709 aa12.41□□□□□ -0.42
PDLIM5-207ENST00000503974 PSME1Q06323 249 aa12.41□□□□□ -0.42
PDLIM5-207ENST00000503974 TTC21BQ7Z4L5 1316 aa12.4□□□□□ -0.42
PDLIM5-207ENST00000503974 TTC21AQ8NDW8 1320 aa12.4□□□□□ -0.42
PDLIM5-207ENST00000503974 PER1O15534 1290 aaPredicted RBP12.4□□□□□ -0.42
PDLIM5-207ENST00000503974 SPATA31A3Q5VYP0 1347 aa12.4□□□□□ -0.42
PDLIM5-207ENST00000503974 RGS22Q8NE09 1264 aa12.39□□□□□ -0.43
PDLIM5-207ENST00000503974 ABCA3Q99758 1704 aa12.39□□□□□ -0.43
PDLIM5-207ENST00000503974 XPCQ01831 940 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-207ENST00000503974 USP31Q70CQ4 1352 aa12.39□□□□□ -0.43
PDLIM5-207ENST00000503974 ARHGEF10O15013 1369 aa12.38□□□□□ -0.43
PDLIM5-207ENST00000503974 NPC1L1Q9UHC9 1359 aa12.38□□□□□ -0.43
PDLIM5-207ENST00000503974 OVOS2A0A0J9YW53 1432 aa12.38□□□□□ -0.43
PDLIM5-207ENST00000503974 OVOS2Q6IE36 1432 aa12.38□□□□□ -0.43
PDLIM5-207ENST00000503974 PHRF1Q9P1Y6 1649 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-207ENST00000503974 SLIT3O75094 1523 aa12.38□□□□□ -0.43
PDLIM5-207ENST00000503974 DDRGK1Q96HY6 314 aa12.38□□□□□ -0.43
PDLIM5-207ENST00000503974 NSD2O96028 1365 aa12.37□□□□□ -0.43
PDLIM5-207ENST00000503974 PNPLA6Q8IY17 1366 aa12.37□□□□□ -0.43
PDLIM5-207ENST00000503974 TPM2P07951 284 aa12.37□□□□□ -0.43
PDLIM5-207ENST00000503974 UTP14CQ5TAP6 766 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-207ENST00000503974 LRRC59Q96AG4 307 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-207ENST00000503974 USP19O94966 1318 aa12.36□□□□□ -0.43
PDLIM5-207ENST00000503974 HSPA1LP34931 641 aa12.36□□□□□ -0.43
PDLIM5-207ENST00000503974 DDX10Q13206 875 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-207ENST00000503974 CGNL1Q0VF96 1302 aa12.35□□□□□ -0.43
PDLIM5-207ENST00000503974 JCADQ9P266 1359 aa12.35□□□□□ -0.43
PDLIM5-207ENST00000503974 FYB1O15117 783 aa12.34□□□□□ -0.43
PDLIM5-207ENST00000503974 NME9Q86XW9 330 aa12.34□□□□□ -0.43
PDLIM5-207ENST00000503974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.34□□□□□ -0.43
PDLIM5-207ENST00000503974 ZHX1Q9UKY1 873 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-207ENST00000503974 KNSTRNQ9Y448 316 aa12.34□□□□□ -0.43
PDLIM5-207ENST00000503974 VGLL3A8MV65 326 aa12.33□□□□□ -0.44
PDLIM5-207ENST00000503974 ABTB2Q8N961 1025 aa12.33□□□□□ -0.44
PDLIM5-207ENST00000503974 NFAT5O94916 1531 aa12.33□□□□□ -0.44
PDLIM5-207ENST00000503974 WWC1Q8IX03 1113 aa12.33□□□□□ -0.44
PDLIM5-207ENST00000503974 MMP14P50281 582 aa12.31□□□□□ -0.44
PDLIM5-207ENST00000503974 NFKBIBQ15653 356 aa12.31□□□□□ -0.44
PDLIM5-207ENST00000503974 PPP4R3BQ5MIZ7 849 aa12.31□□□□□ -0.44
PDLIM5-207ENST00000503974 NLRP13Q86W25 1043 aa12.31□□□□□ -0.44
PDLIM5-207ENST00000503974 ZRANB1Q9UGI0 708 aa12.31□□□□□ -0.44
PDLIM5-207ENST00000503974 NLRP6P59044 892 aa12.3□□□□□ -0.44
PDLIM5-207ENST00000503974 GGNBP2Q9H3C7 697 aa12.3□□□□□ -0.44
PDLIM5-207ENST00000503974 SPATA31A6Q5VVP1 1343 aa12.3□□□□□ -0.44
PDLIM5-207ENST00000503974 TPRNQ4KMQ1 711 aa12.3□□□□□ -0.44
PDLIM5-207ENST00000503974 AATKQ6ZMQ8 1374 aa12.29□□□□□ -0.44
PDLIM5-207ENST00000503974 PARD3Q8TEW0 1356 aa12.29□□□□□ -0.44
PDLIM5-207ENST00000503974 IRX3P78415 501 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-207ENST00000503974 COG3Q96JB2 828 aa12.29□□□□□ -0.44
PDLIM5-207ENST00000503974 ABCC6O95255 1503 aa12.29□□□□□ -0.44
PDLIM5-207ENST00000503974 LRP6O75581 1613 aa12.28□□□□□ -0.44
PDLIM5-207ENST00000503974 DMTNQ08495 405 aa12.28□□□□□ -0.44
PDLIM5-207ENST00000503974 NUTM2GQ5VZR2 741 aa12.28□□□□□ -0.44
PDLIM5-207ENST00000503974 LMOD2Q6P5Q4 547 aa12.28□□□□□ -0.44
PDLIM5-207ENST00000503974 MAP7D2Q96T17 732 aa12.28□□□□□ -0.44
PDLIM5-207ENST00000503974 LTN1O94822 1766 aa12.28□□□□□ -0.44
PDLIM5-207ENST00000503974 CPDO75976 1380 aa12.28□□□□□ -0.44
PDLIM5-207ENST00000503974 PRDM10Q9NQV6 1147 aa12.28□□□□□ -0.44
PDLIM5-207ENST00000503974 SMG6Q86US8 1419 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-207ENST00000503974 KCNH5Q8NCM2 988 aa12.27□□□□□ -0.45
PDLIM5-207ENST00000503974 LMO7Q8WWI1 1683 aa12.27□□□□□ -0.45
PDLIM5-207ENST00000503974 COL18A1P39060 1754 aa12.27□□□□□ -0.45
PDLIM5-207ENST00000503974 GCP02774 474 aa12.26□□□□□ -0.45
PDLIM5-207ENST00000503974 TICAM2Q86XR7 235 aa12.26□□□□□ -0.45
PDLIM5-207ENST00000503974 CLGNO14967 610 aa12.26□□□□□ -0.45
PDLIM5-207ENST00000503974 GRIPAP1Q4V328 841 aa12.26□□□□□ -0.45
PDLIM5-207ENST00000503974 MAP2P11137 1827 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-207ENST00000503974 PEAK1Q9H792 1746 aa12.25□□□□□ -0.45
PDLIM5-207ENST00000503974 COL14A1Q05707 1796 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-207ENST00000503974 CC2D1BQ5T0F9 858 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-207ENST00000503974 B4GALNT3Q6L9W6 998 aa12.25□□□□□ -0.45
PDLIM5-207ENST00000503974 CABLES1Q8TDN4 633 aa12.25□□□□□ -0.45
PDLIM5-207ENST00000503974 MORC1Q86VD1 984 aa12.25□□□□□ -0.45
PDLIM5-207ENST00000503974 KIF24Q5T7B8 1368 aa12.24□□□□□ -0.45
PDLIM5-207ENST00000503974 PLCH1Q4KWH8 1693 aa12.24□□□□□ -0.45
PDLIM5-207ENST00000503974 CCER2I3L3R5 266 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms