RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 PODXL2Q9NZ53 605 aa14.81□□□□□ -0.04
EXOSC9-203ENST00000503139 TRIM32Q13049 653 aa14.8□□□□□ -0.04
EXOSC9-203ENST00000503139 NCOA4Q13772 614 aa14.79□□□□□ -0.04
EXOSC9-203ENST00000503139 TRAF7Q6Q0C0 670 aa14.79□□□□□ -0.04
EXOSC9-203ENST00000503139 TRMT44Q8IYL2 757 aaKnown RBP14.79□□□□□ -0.04
EXOSC9-203ENST00000503139 GGCXP38435 758 aa14.78□□□□□ -0.04
EXOSC9-203ENST00000503139 KCTD17Q8N5Z5 321 aa14.78□□□□□ -0.04
EXOSC9-203ENST00000503139 LZTS3O60299 673 aaPredicted RBP14.77□□□□□ -0.05
EXOSC9-203ENST00000503139 ELOAQ14241 798 aaKnown RBP14.77□□□□□ -0.05
EXOSC9-203ENST00000503139 MAP7D1Q3KQU3 841 aa14.77□□□□□ -0.05
EXOSC9-203ENST00000503139 TSGA10IPQ3SY00 556 aa14.77□□□□□ -0.05
EXOSC9-203ENST00000503139 PPP1R18Q6NYC8 613 aa14.77□□□□□ -0.05
EXOSC9-203ENST00000503139 SLC10A4Q96EP9 437 aa14.77□□□□□ -0.05
EXOSC9-203ENST00000503139 TMEM88BA6NKF7 163 aa14.76□□□□□ -0.05
EXOSC9-203ENST00000503139 ZBTB24O43167 697 aaPredicted RBP14.76□□□□□ -0.05
EXOSC9-203ENST00000503139 GIGYF1O75420 1035 aaPredicted RBP14.76□□□□□ -0.05
EXOSC9-203ENST00000503139 CCDC85AQ96PX6 553 aaPredicted RBP14.76□□□□□ -0.05
EXOSC9-203ENST00000503139 ZBTB7CA1YPR0 619 aa14.75□□□□□ -0.05
EXOSC9-203ENST00000503139 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.75□□□□□ -0.05
EXOSC9-203ENST00000503139 MKRN1Q9UHC7 482 aaKnown RBP14.75□□□□□ -0.05
EXOSC9-203ENST00000503139 ZMIZ1Q9ULJ6 1067 aa14.75□□□□□ -0.05
EXOSC9-203ENST00000503139 CARNS1A5YM72 827 aa14.74□□□□□ -0.05
EXOSC9-203ENST00000503139 ESPNB1AK53 854 aa14.74□□□□□ -0.05
EXOSC9-203ENST00000503139 WNT7BP56706 349 aa14.74□□□□□ -0.05
EXOSC9-203ENST00000503139 SKOR1P84550 965 aa14.74□□□□□ -0.05
EXOSC9-203ENST00000503139 FAM196BA6NMK8 535 aa14.73□□□□□ -0.05
EXOSC9-203ENST00000503139 RPIAP49247 311 aa14.72□□□□□ -0.05
EXOSC9-203ENST00000503139 NBPF20Q3BBV1 942 aa14.72□□□□□ -0.05
EXOSC9-203ENST00000503139 CRTC2Q53ET0 693 aaPredicted RBP14.72□□□□□ -0.05
EXOSC9-203ENST00000503139 CDV3Q9UKY7 258 aaKnown RBP14.72□□□□□ -0.05
EXOSC9-203ENST00000503139 USP17L15C9J2P7 530 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 USP17L10C9JJH3 530 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 USP17L13C9JLJ4 530 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 USP17L12C9JPN9 530 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 USP17L11C9JVI0 530 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 USP17L21D6R901 530 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 USP17L18D6R9N7 530 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 USP17L22D6RA61 530 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 USP17L17D6RBQ6 530 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 USP17L19D6RCP7 530 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 USP17L20D6RJB6 530 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 ATP5J2-PTCD1G3V325 749 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 USP17L24Q0WX57 530 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 EML3Q32P44 896 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 AEBP1Q8IUX7 1158 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 DOLKQ9UPQ8 538 aa14.71□□□□□ -0.05
EXOSC9-203ENST00000503139 RNF20Q5VTR2 975 aa14.7□□□□□ -0.06
EXOSC9-203ENST00000503139 STK32AQ8WU08 396 aa14.7□□□□□ -0.06
EXOSC9-203ENST00000503139 NOVA2Q9UNW9 492 aaKnown RBP14.7□□□□□ -0.06
EXOSC9-203ENST00000503139 VARSP26640 1264 aaKnown RBP14.69□□□□□ -0.06
EXOSC9-203ENST00000503139 PTK7Q13308 1070 aa14.69□□□□□ -0.06
EXOSC9-203ENST00000503139 TMEM164Q5U3C3 297 aa14.68□□□□□ -0.06
EXOSC9-203ENST00000503139 SEPT12Q8IYM1 358 aa14.68□□□□□ -0.06
EXOSC9-203ENST00000503139 BRD1O95696 1058 aa14.67□□□□□ -0.06
EXOSC9-203ENST00000503139 RASA1P20936 1047 aa14.67□□□□□ -0.06
EXOSC9-203ENST00000503139 EMID1Q96A84 441 aaPredicted RBP14.67□□□□□ -0.06
EXOSC9-203ENST00000503139 MAP4K5Q9Y4K4 846 aa14.67□□□□□ -0.06
EXOSC9-203ENST00000503139 CLDN10P78369 228 aa14.66□□□□□ -0.06
EXOSC9-203ENST00000503139 LARP1Q6PKG0 1096 aaKnown RBP14.66□□□□□ -0.06
EXOSC9-203ENST00000503139 CDCA7Q9BWT1 371 aaPredicted RBP14.66□□□□□ -0.06
EXOSC9-203ENST00000503139 OXLD1Q5BKU9 147 aa14.65□□□□□ -0.06
EXOSC9-203ENST00000503139 OGFOD1Q8N543 542 aa14.65□□□□□ -0.06
EXOSC9-203ENST00000503139 NOD1Q9Y239 953 aa14.65□□□□□ -0.06
EXOSC9-203ENST00000503139 MMRN1Q13201 1228 aa14.64□□□□□ -0.07
EXOSC9-203ENST00000503139 IFFO2Q5TF58 517 aa14.64□□□□□ -0.07
EXOSC9-203ENST00000503139 LIAT1Q6ZQX7 453 aa14.64□□□□□ -0.07
EXOSC9-203ENST00000503139 TRIM50Q86XT4 487 aa14.64□□□□□ -0.07
EXOSC9-203ENST00000503139 CCDC125Q86Z20 511 aa14.64□□□□□ -0.07
EXOSC9-203ENST00000503139 KCTD15Q96SI1 283 aaPredicted RBP14.64□□□□□ -0.07
EXOSC9-203ENST00000503139 PCDHB11Q9Y5F2 797 aa14.62□□□□□ -0.07
EXOSC9-203ENST00000503139 DKK1O94907 266 aa14.61□□□□□ -0.07
EXOSC9-203ENST00000503139 CD2BP2O95400 341 aaKnown RBP14.61□□□□□ -0.07
EXOSC9-203ENST00000503139 INTS6LQ5JSJ4 861 aaKnown RBP14.61□□□□□ -0.07
EXOSC9-203ENST00000503139 RC3H1Q5TC82 1133 aaKnown RBP14.61□□□□□ -0.07
EXOSC9-203ENST00000503139 ANKMY2Q8IV38 441 aa14.61□□□□□ -0.07
EXOSC9-203ENST00000503139 DNAAF2Q9NVR5 837 aaKnown RBP14.61□□□□□ -0.07
EXOSC9-203ENST00000503139 KIAA1024Q9UPX6 916 aa14.61□□□□□ -0.07
EXOSC9-203ENST00000503139 ATP1A2P50993 1020 aa14.6□□□□□ -0.07
EXOSC9-203ENST00000503139 KCNA1Q09470 495 aa14.6□□□□□ -0.07
EXOSC9-203ENST00000503139 FAM69CQ0P6D2 419 aa14.6□□□□□ -0.07
EXOSC9-203ENST00000503139 VASH1Q7L8A9 365 aaPredicted RBP14.6□□□□□ -0.07
EXOSC9-203ENST00000503139 EHBP1Q8NDI1 1231 aa14.6□□□□□ -0.07
EXOSC9-203ENST00000503139 CDK15Q96Q40 435 aa14.6□□□□□ -0.07
EXOSC9-203ENST00000503139 ZBTB7BO15156 539 aaPredicted RBP14.59□□□□□ -0.07
EXOSC9-203ENST00000503139 GTF2IP78347 998 aa14.59□□□□□ -0.07
EXOSC9-203ENST00000503139 SIX5Q8N196 739 aa14.59□□□□□ -0.07
EXOSC9-203ENST00000503139 LARGE2Q8N3Y3 721 aa14.59□□□□□ -0.07
EXOSC9-203ENST00000503139 DPYDQ12882 1025 aa14.58□□□□□ -0.08
EXOSC9-203ENST00000503139 FAM200AQ8TCP9 573 aa14.58□□□□□ -0.08
EXOSC9-203ENST00000503139 ZNF594Q96JF6 807 aaPredicted RBP14.58□□□□□ -0.08
EXOSC9-203ENST00000503139 PCDHGA11Q9Y5H2 935 aa14.58□□□□□ -0.08
EXOSC9-203ENST00000503139 MPNDQ8N594 471 aa14.57□□□□□ -0.08
EXOSC9-203ENST00000503139 PATL2C9JE40 543 aaKnown RBP14.56□□□□□ -0.08
EXOSC9-203ENST00000503139 SIAH2O43255 324 aa14.56□□□□□ -0.08
EXOSC9-203ENST00000503139 RAB15P59190 212 aa14.56□□□□□ -0.08
EXOSC9-203ENST00000503139 USP4Q13107 963 aa14.56□□□□□ -0.08
EXOSC9-203ENST00000503139 SIRT1Q96EB6 747 aa14.56□□□□□ -0.08
EXOSC9-203ENST00000503139 SLAIN2Q9P270 581 aa14.56□□□□□ -0.08
EXOSC9-203ENST00000503139 ERVH48-1M5A8F1 160 aa14.55□□□□□ -0.08
EXOSC9-203ENST00000503139 GRM5P41594 1212 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms