RNA–Protein interactions for RNA: ENST00000502575.1

PDE4D-209, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-209ENST00000502575 BCANQ96GW7 911 aa13.24□□□□□ -0.29
PDE4D-209ENST00000502575 HFM1A2PYH4 1435 aa13.23□□□□□ -0.29
PDE4D-209ENST00000502575 PPP1R3GB7ZBB8 358 aa13.22□□□□□ -0.29
PDE4D-209ENST00000502575 PDIA6Q15084 440 aa13.22□□□□□ -0.29
PDE4D-209ENST00000502575 ZBED2Q9BTP6 218 aa13.22□□□□□ -0.29
PDE4D-209ENST00000502575 HCSTQ9UBK5 93 aa13.22□□□□□ -0.29
PDE4D-209ENST00000502575 PROSER2Q86WR7 435 aaPredicted RBP13.21□□□□□ -0.29
PDE4D-209ENST00000502575 PTPRUQ92729 1446 aa13.21□□□□□ -0.3
PDE4D-209ENST00000502575 COL16A1Q07092 1604 aaPredicted RBP13.2□□□□□ -0.3
PDE4D-209ENST00000502575 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.18□□□□□ -0.3
PDE4D-209ENST00000502575 NBPF3Q9H094 633 aa13.18□□□□□ -0.3
PDE4D-209ENST00000502575 FAM135BQ49AJ0 1406 aa13.17□□□□□ -0.3
PDE4D-209ENST00000502575 TBX22Q9Y458 520 aa13.17□□□□□ -0.3
PDE4D-209ENST00000502575 MSH6P52701 1360 aa13.17□□□□□ -0.3
PDE4D-209ENST00000502575 NHSL1Q5SYE7 1610 aa13.17□□□□□ -0.3
PDE4D-209ENST00000502575 SHPRHQ149N8 1683 aa13.15□□□□□ -0.3
PDE4D-209ENST00000502575 BHMG1C9JSJ3 638 aaPredicted RBP13.15□□□□□ -0.3
PDE4D-209ENST00000502575 SOCS7O14512 581 aa13.15□□□□□ -0.3
PDE4D-209ENST00000502575 HDGFP51858 240 aaKnown RBP13.15□□□□□ -0.3
PDE4D-209ENST00000502575 ZNF326Q5BKZ1 582 aaKnown RBP13.15□□□□□ -0.3
PDE4D-209ENST00000502575 ONECUT3O60422 494 aaPredicted RBP13.14□□□□□ -0.31
PDE4D-209ENST00000502575 TRIM52Q96A61 297 aa13.14□□□□□ -0.31
PDE4D-209ENST00000502575 PIK3R4Q99570 1358 aa13.14□□□□□ -0.31
PDE4D-209ENST00000502575 METP08581 1390 aa13.13□□□□□ -0.31
PDE4D-209ENST00000502575 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
PDE4D-209ENST00000502575 MRPL50Q8N5N7 158 aaKnown RBP13.12□□□□□ -0.31
PDE4D-209ENST00000502575 RABGEF1Q9UJ41 708 aa13.12□□□□□ -0.31
PDE4D-209ENST00000502575 AMOTL2Q9Y2J4 779 aa13.11□□□□□ -0.31
PDE4D-209ENST00000502575 KNDC1Q76NI1 1749 aa13.1□□□□□ -0.31
PDE4D-209ENST00000502575 RGPD8O14715 1765 aaPredicted RBP13.1□□□□□ -0.31
PDE4D-209ENST00000502575 C6orf132Q5T0Z8 1188 aa13.1□□□□□ -0.31
PDE4D-209ENST00000502575 C14orf37Q86TY3 774 aa13.1□□□□□ -0.31
PDE4D-209ENST00000502575 NCOA3Q9Y6Q9 1424 aa13.1□□□□□ -0.31
PDE4D-209ENST00000502575 GOLGA8CPA6NN73 597 aa13.09□□□□□ -0.31
PDE4D-209ENST00000502575 KCTD12Q96CX2 325 aaKnown RBP13.09□□□□□ -0.31
PDE4D-209ENST00000502575 SLAIN2Q9P270 581 aa13.09□□□□□ -0.31
PDE4D-209ENST00000502575 ASXL1Q8IXJ9 1541 aa13.08□□□□□ -0.31
PDE4D-209ENST00000502575 EN1Q05925 392 aaPredicted RBP13.08□□□□□ -0.32
PDE4D-209ENST00000502575 DDX12PQ92771 950 aa13.08□□□□□ -0.32
PDE4D-209ENST00000502575 RGS17Q9UGC6 210 aaPredicted RBP13.07□□□□□ -0.32
PDE4D-209ENST00000502575 LRP6O75581 1613 aa13.06□□□□□ -0.32
PDE4D-209ENST00000502575 LAMC1P11047 1609 aa13.06□□□□□ -0.32
PDE4D-209ENST00000502575 DCCP43146 1447 aa13.06□□□□□ -0.32
PDE4D-209ENST00000502575 MST1RQ04912 1400 aa13.06□□□□□ -0.32
PDE4D-209ENST00000502575 ADGRL3Q9HAR2 1447 aa13.06□□□□□ -0.32
PDE4D-209ENST00000502575 NBR1Q14596 966 aa13.06□□□□□ -0.32
PDE4D-209ENST00000502575 LAPTM4BQ86VI4 370 aa13.06□□□□□ -0.32
PDE4D-209ENST00000502575 SPATA31E1Q6ZUB1 1445 aa13.05□□□□□ -0.32
PDE4D-209ENST00000502575 COL9A1P20849 921 aa13.05□□□□□ -0.32
PDE4D-209ENST00000502575 C19orf44Q9H6X5 657 aa13.05□□□□□ -0.32
PDE4D-209ENST00000502575 CCDC144AA2RUR9 1427 aa13.04□□□□□ -0.32
PDE4D-209ENST00000502575 PTCH1Q13635 1447 aa13.04□□□□□ -0.32
PDE4D-209ENST00000502575 ATF3P18847 181 aa13.03□□□□□ -0.32
PDE4D-209ENST00000502575 TSHZ2Q9NRE2 1034 aa13.03□□□□□ -0.32
PDE4D-209ENST00000502575 ROBO2Q9HCK4 1378 aa13.03□□□□□ -0.32
PDE4D-209ENST00000502575 FMN2Q9NZ56 1722 aa13.02□□□□□ -0.32
PDE4D-209ENST00000502575 MARF1Q9Y4F3 1742 aaKnown RBP13.02□□□□□ -0.32
PDE4D-209ENST00000502575 MAP3K7O43318 606 aa13.02□□□□□ -0.33
PDE4D-209ENST00000502575 BRINP3Q76B58 766 aa13.02□□□□□ -0.33
PDE4D-209ENST00000502575 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
PDE4D-209ENST00000502575 MPHOSPH9Q99550 1183 aa13.02□□□□□ -0.33
PDE4D-209ENST00000502575 JCADQ9P266 1359 aa13.02□□□□□ -0.33
PDE4D-209ENST00000502575 PRAG1Q86YV5 1406 aa13.02□□□□□ -0.33
PDE4D-209ENST00000502575 SETD5Q9C0A6 1442 aa13.02□□□□□ -0.33
PDE4D-209ENST00000502575 THSD4Q6ZMP0 1018 aa13.01□□□□□ -0.33
PDE4D-209ENST00000502575 WNT2BQ93097 391 aa13.01□□□□□ -0.33
PDE4D-209ENST00000502575 CDC42BPGQ6DT37 1551 aa13.01□□□□□ -0.33
PDE4D-209ENST00000502575 RAB3GAP2Q9H2M9 1393 aa13□□□□□ -0.33
PDE4D-209ENST00000502575 ADGRF5Q8IZF2 1346 aa13□□□□□ -0.33
PDE4D-209ENST00000502575 TRIM6-TRIM34B2RNG4 842 aa13□□□□□ -0.33
PDE4D-209ENST00000502575 PROX2Q3B8N5 592 aa13□□□□□ -0.33
PDE4D-209ENST00000502575 RPGRIP1LQ68CZ1 1315 aa12.99□□□□□ -0.33
PDE4D-209ENST00000502575 PIK3C2GO75747 1445 aa12.98□□□□□ -0.33
PDE4D-209ENST00000502575 RGL3Q3MIN7 710 aa12.98□□□□□ -0.33
PDE4D-209ENST00000502575 POTEAQ6S8J7 498 aa12.98□□□□□ -0.33
PDE4D-209ENST00000502575 ANKK1Q8NFD2 765 aa12.98□□□□□ -0.33
PDE4D-209ENST00000502575 DDX17Q92841 729 aaKnown RBP12.98□□□□□ -0.33
PDE4D-209ENST00000502575 C1orf167Q5SNV9 1468 aa12.97□□□□□ -0.33
PDE4D-209ENST00000502575 PLA2G2EQ9NZK7 142 aa12.97□□□□□ -0.33
PDE4D-209ENST00000502575 KIAA1468Q9P260 1216 aa12.97□□□□□ -0.33
PDE4D-209ENST00000502575 COL22A1Q8NFW1 1626 aaPredicted RBP12.96□□□□□ -0.33
PDE4D-209ENST00000502575 PACS2Q86VP3 889 aa12.95□□□□□ -0.34
PDE4D-209ENST00000502575 NRXN1Q9ULB1 1477 aa12.95□□□□□ -0.34
PDE4D-209ENST00000502575 TECPR2O15040 1411 aa12.95□□□□□ -0.34
PDE4D-209ENST00000502575 EP400Q96L91 3159 aa12.95□□□□□ -0.34
PDE4D-209ENST00000502575 KIF1AQ12756 1690 aa12.94□□□□□ -0.34
PDE4D-209ENST00000502575 MYOM2P54296 1465 aa12.94□□□□□ -0.34
PDE4D-209ENST00000502575 GRXCR2A6NFK2 248 aa12.94□□□□□ -0.34
PDE4D-209ENST00000502575 PLCB2Q00722 1185 aa12.94□□□□□ -0.34
PDE4D-209ENST00000502575 ANKRD30BQ9BXX2 1392 aa12.94□□□□□ -0.34
PDE4D-209ENST00000502575 PLEKHH1Q9ULM0 1364 aa12.94□□□□□ -0.34
PDE4D-209ENST00000502575 ARHGEF28Q8N1W1 1705 aaKnown RBP12.93□□□□□ -0.34
PDE4D-209ENST00000502575 ABCA3Q99758 1704 aa12.93□□□□□ -0.34
PDE4D-209ENST00000502575 SPATA31A6Q5VVP1 1343 aa12.93□□□□□ -0.34
PDE4D-209ENST00000502575 USP32Q8NFA0 1604 aa12.93□□□□□ -0.34
PDE4D-209ENST00000502575 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
PDE4D-209ENST00000502575 NYAP1Q6ZVC0 841 aa12.93□□□□□ -0.34
PDE4D-209ENST00000502575 RBM27Q9P2N5 1060 aaKnown RBP12.93□□□□□ -0.34
PDE4D-209ENST00000502575 OSBPP22059 807 aa12.92□□□□□ -0.34
PDE4D-209ENST00000502575 PTPN5P54829 565 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms