RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 SMPD1P17405 629 aa9.81□□□□□ -0.84
SSR3-209ENST00000498205 DHX9Q08211 1270 aaKnown RBP9.81□□□□□ -0.84
SSR3-209ENST00000498205 RNF20Q5VTR2 975 aa9.81□□□□□ -0.84
SSR3-209ENST00000498205 PROSER2Q86WR7 435 aaPredicted RBP9.81□□□□□ -0.84
SSR3-209ENST00000498205 PCDHB9Q9Y5E1 797 aa9.81□□□□□ -0.84
SSR3-209ENST00000498205 POM121Q96HA1 1249 aa9.8□□□□□ -0.84
SSR3-209ENST00000498205 KCTD15Q96SI1 283 aaPredicted RBP9.8□□□□□ -0.84
SSR3-209ENST00000498205 J3QL48 77 aa9.79□□□□□ -0.84
SSR3-209ENST00000498205 FSHRP23945 695 aa9.78□□□□□ -0.84
SSR3-209ENST00000498205 GRM5P41594 1212 aa9.78□□□□□ -0.84
SSR3-209ENST00000498205 VAC14Q08AM6 782 aa9.78□□□□□ -0.84
SSR3-209ENST00000498205 SEMA3FQ13275 785 aa9.78□□□□□ -0.84
SSR3-209ENST00000498205 NNTQ13423 1086 aa9.78□□□□□ -0.84
SSR3-209ENST00000498205 CRIPAKQ8N1N5 446 aa9.78□□□□□ -0.84
SSR3-209ENST00000498205 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
SSR3-209ENST00000498205 ESPNB1AK53 854 aa9.77□□□□□ -0.85
SSR3-209ENST00000498205 SMCPP49901 116 aaPredicted RBP9.77□□□□□ -0.85
SSR3-209ENST00000498205 Q6ZNB5 142 aa9.77□□□□□ -0.85
SSR3-209ENST00000498205 CCDC116Q8IYX3 515 aa9.77□□□□□ -0.85
SSR3-209ENST00000498205 EMILIN1Q9Y6C2 1016 aa9.77□□□□□ -0.85
SSR3-209ENST00000498205 FNBP4Q8N3X1 1017 aaPredicted RBP9.76□□□□□ -0.85
SSR3-209ENST00000498205 PGPEP1Q9NXJ5 209 aa9.76□□□□□ -0.85
SSR3-209ENST00000498205 ZMYND15Q9H091 742 aa9.75□□□□□ -0.85
SSR3-209ENST00000498205 INTS6LQ5JSJ4 861 aaKnown RBP9.73□□□□□ -0.85
SSR3-209ENST00000498205 CEP126Q9P2H0 1117 aa9.73□□□□□ -0.85
SSR3-209ENST00000498205 AXIN1O15169 862 aa9.72□□□□□ -0.85
SSR3-209ENST00000498205 SLFNL1Q499Z3 407 aa9.72□□□□□ -0.85
SSR3-209ENST00000498205 HPS1Q92902 700 aa9.72□□□□□ -0.85
SSR3-209ENST00000498205 NR3C2P08235 984 aa9.71□□□□□ -0.86
SSR3-209ENST00000498205 MYT1Q01538 1121 aa9.71□□□□□ -0.86
SSR3-209ENST00000498205 ALG2Q9H553 416 aa9.71□□□□□ -0.86
SSR3-209ENST00000498205 TRAK2O60296 914 aa9.7□□□□□ -0.86
SSR3-209ENST00000498205 GIGYF1O75420 1035 aaPredicted RBP9.7□□□□□ -0.86
SSR3-209ENST00000498205 WDR4P57081 412 aaKnown RBP9.7□□□□□ -0.86
SSR3-209ENST00000498205 PPP1R26Q5T8A7 1209 aaPredicted RBP9.7□□□□□ -0.86
SSR3-209ENST00000498205 TRAF7Q6Q0C0 670 aa9.7□□□□□ -0.86
SSR3-209ENST00000498205 C14orf37Q86TY3 774 aa9.7□□□□□ -0.86
SSR3-209ENST00000498205 CAPN5O15484 640 aaPredicted RBP9.69□□□□□ -0.86
SSR3-209ENST00000498205 TIMP2P16035 220 aa9.69□□□□□ -0.86
SSR3-209ENST00000498205 KLF16Q9BXK1 252 aaPredicted RBP9.69□□□□□ -0.86
SSR3-209ENST00000498205 ZIC2O95409 532 aaPredicted RBP9.68□□□□□ -0.86
SSR3-209ENST00000498205 MAP7D1Q3KQU3 841 aa9.68□□□□□ -0.86
SSR3-209ENST00000498205 NFATC2IPQ8NCF5 419 aa9.68□□□□□ -0.86
SSR3-209ENST00000498205 ERVH48-1M5A8F1 160 aa9.67□□□□□ -0.86
SSR3-209ENST00000498205 LZTS3O60299 673 aaPredicted RBP9.67□□□□□ -0.86
SSR3-209ENST00000498205 RNF135Q8IUD6 432 aa9.67□□□□□ -0.86
SSR3-209ENST00000498205 SIRT1Q96EB6 747 aa9.67□□□□□ -0.86
SSR3-209ENST00000498205 ITPKCQ96DU7 683 aa9.66□□□□□ -0.86
SSR3-209ENST00000498205 ESF1Q9H501 851 aaKnown RBP9.66□□□□□ -0.86
SSR3-209ENST00000498205 AAASQ9NRG9 546 aa9.66□□□□□ -0.86
SSR3-209ENST00000498205 UPP2O95045 317 aa9.65□□□□□ -0.86
SSR3-209ENST00000498205 RAB15P59190 212 aa9.65□□□□□ -0.86
SSR3-209ENST00000498205 HDGFL1Q5TGJ6 251 aa9.65□□□□□ -0.86
SSR3-209ENST00000498205 PHTF2Q8N3S3 785 aa9.65□□□□□ -0.86
SSR3-209ENST00000498205 CHIC2Q9UKJ5 165 aa9.65□□□□□ -0.86
SSR3-209ENST00000498205 POM121CA8CG34 1229 aa9.64□□□□□ -0.87
SSR3-209ENST00000498205 GLMNQ92990 594 aa9.64□□□□□ -0.87
SSR3-209ENST00000498205 CALR3Q96L12 384 aaKnown RBP9.64□□□□□ -0.87
SSR3-209ENST00000498205 MYCP01106 439 aaPredicted RBP9.63□□□□□ -0.87
SSR3-209ENST00000498205 USP4Q13107 963 aa9.63□□□□□ -0.87
SSR3-209ENST00000498205 CC2D2BQ6DHV5 1058 aa9.63□□□□□ -0.87
SSR3-209ENST00000498205 Q6ZVU0 165 aa9.63□□□□□ -0.87
SSR3-209ENST00000498205 DOLKQ9UPQ8 538 aa9.63□□□□□ -0.87
SSR3-209ENST00000498205 PCDHB11Q9Y5F2 797 aa9.63□□□□□ -0.87
SSR3-209ENST00000498205 ERVK-9P63128 1117 aa9.62□□□□□ -0.87
SSR3-209ENST00000498205 SCARF1Q14162 830 aa9.62□□□□□ -0.87
SSR3-209ENST00000498205 MEIOBQ8N635 442 aa9.62□□□□□ -0.87
SSR3-209ENST00000498205 ZNF784Q8NCA9 323 aaPredicted RBP9.62□□□□□ -0.87
SSR3-209ENST00000498205 TSEN34Q9BSV6 310 aaKnown RBP9.62□□□□□ -0.87
SSR3-209ENST00000498205 SENP2Q9HC62 589 aa9.62□□□□□ -0.87
SSR3-209ENST00000498205 PLPP7Q8NBV4 271 aa9.61□□□□□ -0.87
SSR3-209ENST00000498205 KIFC2Q96AC6 838 aa9.61□□□□□ -0.87
SSR3-209ENST00000498205 ZFAND3Q9H8U3 227 aa9.61□□□□□ -0.87
SSR3-209ENST00000498205 TMPRSS4Q9NRS4 437 aa9.61□□□□□ -0.87
SSR3-209ENST00000498205 MRPL14Q6P1L8 145 aaKnown RBP9.6□□□□□ -0.87
SSR3-209ENST00000498205 ATP13A2Q9NQ11 1180 aa9.6□□□□□ -0.87
SSR3-209ENST00000498205 ST8SIA5O15466 376 aa9.59□□□□□ -0.87
SSR3-209ENST00000498205 CYP2U1Q7Z449 544 aa9.59□□□□□ -0.87
SSR3-209ENST00000498205 ADAMTS19Q8TE59 1207 aa9.59□□□□□ -0.87
SSR3-209ENST00000498205 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
SSR3-209ENST00000498205 LILRA1O75019 489 aa9.58□□□□□ -0.88
SSR3-209ENST00000498205 ADH1AP07327 375 aa9.58□□□□□ -0.88
SSR3-209ENST00000498205 SKIP12755 728 aa9.58□□□□□ -0.88
SSR3-209ENST00000498205 EML3Q32P44 896 aa9.58□□□□□ -0.88
SSR3-209ENST00000498205 LINC00528Q8N1L1 170 aa9.58□□□□□ -0.88
SSR3-209ENST00000498205 CYLDQ9NQC7 956 aa9.58□□□□□ -0.88
SSR3-209ENST00000498205 ZNF777Q9ULD5 760 aaPredicted RBP9.58□□□□□ -0.88
SSR3-209ENST00000498205 ATP9BO43861 1147 aa9.57□□□□□ -0.88
SSR3-209ENST00000498205 PLEKHM2Q8IWE5 1019 aa9.57□□□□□ -0.88
SSR3-209ENST00000498205 ATP5J2-PTCD1G3V325 749 aa9.56□□□□□ -0.88
SSR3-209ENST00000498205 OXLD1Q5BKU9 147 aa9.55□□□□□ -0.88
SSR3-209ENST00000498205 USP17L5A8MUK1 530 aa9.54□□□□□ -0.88
SSR3-209ENST00000498205 LCE2BO14633 110 aa9.54□□□□□ -0.88
SSR3-209ENST00000498205 GNRH1P01148 92 aa9.54□□□□□ -0.88
SSR3-209ENST00000498205 CBLBQ13191 982 aa9.54□□□□□ -0.88
SSR3-209ENST00000498205 UCN2Q96RP3 112 aa9.54□□□□□ -0.88
SSR3-209ENST00000498205 NOD1Q9Y239 953 aa9.54□□□□□ -0.88
SSR3-209ENST00000498205 BMP2P12643 396 aa9.53□□□□□ -0.88
SSR3-209ENST00000498205 PTGIRP43119 386 aa9.53□□□□□ -0.88
SSR3-209ENST00000498205 TRIM46Q7Z4K8 759 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms