RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 POTEAQ6S8J7 498 aa21.79■■□□□ 1.08
SSBP1-214ENST00000498107 NRAPQ86VF7 1730 aa21.79■■□□□ 1.08
SSBP1-214ENST00000498107 COL18A1P39060 1754 aa21.79■■□□□ 1.08
SSBP1-214ENST00000498107 CAMTA1Q9Y6Y1 1673 aa21.79■■□□□ 1.08
SSBP1-214ENST00000498107 KIF24Q5T7B8 1368 aa21.78■■□□□ 1.08
SSBP1-214ENST00000498107 RXRBP28702 533 aa21.78■■□□□ 1.08
SSBP1-214ENST00000498107 RBM6P78332 1123 aaKnown RBP21.78■■□□□ 1.08
SSBP1-214ENST00000498107 MAP3K19Q56UN5 1328 aa21.78■■□□□ 1.08
SSBP1-214ENST00000498107 RTL1A6NKG5 1358 aa21.77■■□□□ 1.08
SSBP1-214ENST00000498107 IP6K1Q92551 441 aa21.77■■□□□ 1.08
SSBP1-214ENST00000498107 STRN4Q9NRL3 753 aa21.77■■□□□ 1.08
SSBP1-214ENST00000498107 CCDC9Q9Y3X0 531 aaKnown RBP21.77■■□□□ 1.08
SSBP1-214ENST00000498107 BLMP54132 1417 aaPredicted RBP21.76■■□□□ 1.07
SSBP1-214ENST00000498107 GJD4Q96KN9 370 aaPredicted RBP21.76■■□□□ 1.07
SSBP1-214ENST00000498107 COL5A2P05997 1499 aaPredicted RBP21.76■■□□□ 1.07
SSBP1-214ENST00000498107 DDX10Q13206 875 aaKnown RBP21.75■■□□□ 1.07
SSBP1-214ENST00000498107 RRS1Q15050 365 aaKnown RBP21.75■■□□□ 1.07
SSBP1-214ENST00000498107 CC2D1BQ5T0F9 858 aaKnown RBP21.75■■□□□ 1.07
SSBP1-214ENST00000498107 AXIN2Q9Y2T1 843 aa21.75■■□□□ 1.07
SSBP1-214ENST00000498107 FBLN1P23142 703 aa21.74■■□□□ 1.07
SSBP1-214ENST00000498107 MAP2P11137 1827 aaKnown RBP21.73■■□□□ 1.07
SSBP1-214ENST00000498107 TNNT2P45379 298 aaPredicted RBP21.73■■□□□ 1.07
SSBP1-214ENST00000498107 WDR17Q8IZU2 1322 aa21.73■■□□□ 1.07
SSBP1-214ENST00000498107 FLT4P35916 1363 aa21.73■■□□□ 1.07
SSBP1-214ENST00000498107 RGPD5Q99666 1765 aa21.72■■□□□ 1.07
SSBP1-214ENST00000498107 CSB-PGBD3P0DP91 1061 aa21.72■■□□□ 1.07
SSBP1-214ENST00000498107 HOXC9P31274 260 aa21.72■■□□□ 1.07
SSBP1-214ENST00000498107 SPATA31A5Q5VU36 1347 aa21.72■■□□□ 1.07
SSBP1-214ENST00000498107 SPATA31A7Q8IWB4 1347 aa21.72■■□□□ 1.07
SSBP1-214ENST00000498107 CRB1P82279 1406 aa21.71■■□□□ 1.07
SSBP1-214ENST00000498107 CDK12Q9NYV4 1490 aaPredicted RBP21.71■■□□□ 1.07
SSBP1-214ENST00000498107 LARP1Q6PKG0 1096 aaKnown RBP21.7■■□□□ 1.06
SSBP1-214ENST00000498107 TOM1L2Q6ZVM7 507 aa21.7■■□□□ 1.06
SSBP1-214ENST00000498107 POLKQ9UBT6 870 aa21.7■■□□□ 1.06
SSBP1-214ENST00000498107 ERBB3P21860 1342 aa21.7■■□□□ 1.06
SSBP1-214ENST00000498107 PPM1GO15355 546 aaPredicted RBP21.69■■□□□ 1.06
SSBP1-214ENST00000498107 ANKRD24Q8TF21 1146 aa21.69■■□□□ 1.06
SSBP1-214ENST00000498107 THRAP3Q9Y2W1 955 aaKnown RBP21.69■■□□□ 1.06
SSBP1-214ENST00000498107 EMILIN1Q9Y6C2 1016 aa21.69■■□□□ 1.06
SSBP1-214ENST00000498107 SPATA31A1Q5TZJ5 1347 aa21.69■■□□□ 1.06
SSBP1-214ENST00000498107 SMG6Q86US8 1419 aaKnown RBP21.69■■□□□ 1.06
SSBP1-214ENST00000498107 INSRP06213 1382 aa21.68■■□□□ 1.06
SSBP1-214ENST00000498107 GLI3P10071 1580 aa21.67■■□□□ 1.06
SSBP1-214ENST00000498107 TCP11L2Q8N4U5 519 aa21.67■■□□□ 1.06
SSBP1-214ENST00000498107 FAM208AQ9UK61 1670 aaKnown RBP21.66■■□□□ 1.06
SSBP1-214ENST00000498107 CNGB1Q14028 1251 aaPredicted RBP21.66■■□□□ 1.06
SSBP1-214ENST00000498107 CARD10Q9BWT7 1032 aa21.66■■□□□ 1.06
SSBP1-214ENST00000498107 HSP90AB2PQ58FF8 381 aa21.65■■□□□ 1.06
SSBP1-214ENST00000498107 LTV1Q96GA3 475 aaPredicted RBP21.65■■□□□ 1.06
SSBP1-214ENST00000498107 USP35Q9P2H5 1018 aa21.65■■□□□ 1.06
SSBP1-214ENST00000498107 PEAK1Q9H792 1746 aa21.65■■□□□ 1.06
SSBP1-214ENST00000498107 ONECUT3O60422 494 aaPredicted RBP21.64■■□□□ 1.05
SSBP1-214ENST00000498107 BARGINQ6ZT62 677 aa21.64■■□□□ 1.05
SSBP1-214ENST00000498107 NLRP2Q9NX02 1062 aa21.64■■□□□ 1.05
SSBP1-214ENST00000498107 FAM98CQ17RN3 349 aaKnown RBP21.62■■□□□ 1.05
SSBP1-214ENST00000498107 CDCA7Q9BWT1 371 aaPredicted RBP21.62■■□□□ 1.05
SSBP1-214ENST00000498107 A0A0G2JS52 829 aa21.61■■□□□ 1.05
SSBP1-214ENST00000498107 MYT1Q01538 1121 aa21.61■■□□□ 1.05
SSBP1-214ENST00000498107 RGS12O14924 1447 aa21.61■■□□□ 1.05
SSBP1-214ENST00000498107 MTHFSP49914 203 aa21.6■■□□□ 1.05
SSBP1-214ENST00000498107 RALBP1Q15311 655 aa21.6■■□□□ 1.05
SSBP1-214ENST00000498107 SEPT12Q8IYM1 358 aa21.6■■□□□ 1.05
SSBP1-214ENST00000498107 PARD3Q8TEW0 1356 aa21.59■■□□□ 1.05
SSBP1-214ENST00000498107 CFAP53Q96M91 514 aa21.56■■□□□ 1.04
SSBP1-214ENST00000498107 THSD7AQ9UPZ6 1657 aa21.56■■□□□ 1.04
SSBP1-214ENST00000498107 PPP2R1AP30153 589 aa21.55■■□□□ 1.04
SSBP1-214ENST00000498107 EIF4A2Q14240 407 aaKnown RBP21.55■■□□□ 1.04
SSBP1-214ENST00000498107 IL2RBP14784 551 aa21.54■■□□□ 1.04
SSBP1-214ENST00000498107 NBPF6Q5VWK0 638 aa21.54■■□□□ 1.04
SSBP1-214ENST00000498107 NBPF4Q96M43 638 aa21.54■■□□□ 1.04
SSBP1-214ENST00000498107 WNK3Q9BYP7 1800 aa21.53■■□□□ 1.04
SSBP1-214ENST00000498107 PARP4Q9UKK3 1724 aaKnown RBP21.52■■□□□ 1.04
SSBP1-214ENST00000498107 RGPD2P0DJD1 1756 aa21.52■■□□□ 1.04
SSBP1-214ENST00000498107 DIAPH1O60610 1272 aaKnown RBP21.51■■□□□ 1.03
SSBP1-214ENST00000498107 PDE3BQ13370 1112 aa21.51■■□□□ 1.03
SSBP1-214ENST00000498107 DDB1Q16531 1140 aa21.51■■□□□ 1.03
SSBP1-214ENST00000498107 KRT27Q7Z3Y8 459 aa21.51■■□□□ 1.03
SSBP1-214ENST00000498107 EYA1Q99502 592 aa21.51■■□□□ 1.03
SSBP1-214ENST00000498107 DISP2A7MBM2 1401 aa21.51■■□□□ 1.03
SSBP1-214ENST00000498107 RAPGEF4Q8WZA2 1011 aa21.5■■□□□ 1.03
SSBP1-214ENST00000498107 BRWD3Q6RI45 1802 aa21.5■■□□□ 1.03
SSBP1-214ENST00000498107 EXOC5O00471 708 aa21.49■■□□□ 1.03
SSBP1-214ENST00000498107 IL13P35225 146 aa21.49■■□□□ 1.03
SSBP1-214ENST00000498107 PRKRIP1Q9H875 184 aaPredicted RBP21.49■■□□□ 1.03
SSBP1-214ENST00000498107 MYBBP1AQ9BQG0 1328 aaKnown RBP21.49■■□□□ 1.03
SSBP1-214ENST00000498107 NCAPD2Q15021 1401 aa21.48■■□□□ 1.03
SSBP1-214ENST00000498107 TATP17735 454 aaPredicted RBP21.48■■□□□ 1.03
SSBP1-214ENST00000498107 USHBP1Q8N6Y0 703 aa21.48■■□□□ 1.03
SSBP1-214ENST00000498107 IGSF1Q8N6C5 1336 aa21.48■■□□□ 1.03
SSBP1-214ENST00000498107 NUDCQ9Y266 331 aa21.47■■□□□ 1.03
SSBP1-214ENST00000498107 LRRC37A3O60309 1634 aa21.46■■□□□ 1.03
SSBP1-214ENST00000498107 PLEKHG2Q9H7P9 1386 aa21.46■■□□□ 1.03
SSBP1-214ENST00000498107 TNS2Q63HR2 1409 aa21.45■■□□□ 1.02
SSBP1-214ENST00000498107 COL3A1P02461 1466 aaPredicted RBP21.45■■□□□ 1.02
SSBP1-214ENST00000498107 ANP32CO43423 234 aa21.44■■□□□ 1.02
SSBP1-214ENST00000498107 OVOS2A0A0G2JMS6 1433 aa21.43■■□□□ 1.02
SSBP1-214ENST00000498107 MEGF6O75095 1541 aa21.42■■□□□ 1.02
SSBP1-214ENST00000498107 RGPD1P0DJD0 1748 aa21.42■■□□□ 1.02
SSBP1-214ENST00000498107 ZCRB1Q8TBF4 217 aaKnown RBP21.42■■□□□ 1.02
SSBP1-214ENST00000498107 U2SURPO15042 1029 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms