RNA–Protein interactions for RNA: ENST00000498053.5

LRRFIP1-215, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-215ENST00000498053 AXIN2Q9Y2T1 843 aa24.3■■□□□ 1.48
LRRFIP1-215ENST00000498053 RRS1Q15050 365 aaKnown RBP24.29■■□□□ 1.48
LRRFIP1-215ENST00000498053 AMER1Q5JTC6 1135 aaPredicted RBP24.29■■□□□ 1.48
LRRFIP1-215ENST00000498053 ABCC6O95255 1503 aa24.28■■□□□ 1.48
LRRFIP1-215ENST00000498053 MAP3K19Q56UN5 1328 aa24.28■■□□□ 1.48
LRRFIP1-215ENST00000498053 NSD2O96028 1365 aa24.28■■□□□ 1.48
LRRFIP1-215ENST00000498053 MAP2P11137 1827 aaKnown RBP24.27■■□□□ 1.48
LRRFIP1-215ENST00000498053 CNGB1Q14028 1251 aaPredicted RBP24.27■■□□□ 1.48
LRRFIP1-215ENST00000498053 TNNT2P45379 298 aaPredicted RBP24.26■■□□□ 1.47
LRRFIP1-215ENST00000498053 VPS72Q15906 364 aa24.26■■□□□ 1.47
LRRFIP1-215ENST00000498053 CCDC9Q9Y3X0 531 aaKnown RBP24.26■■□□□ 1.47
LRRFIP1-215ENST00000498053 RXRBP28702 533 aa24.24■■□□□ 1.47
LRRFIP1-215ENST00000498053 CC2D1BQ5T0F9 858 aaKnown RBP24.24■■□□□ 1.47
LRRFIP1-215ENST00000498053 LARP1Q6PKG0 1096 aaKnown RBP24.24■■□□□ 1.47
LRRFIP1-215ENST00000498053 GJD4Q96KN9 370 aaPredicted RBP24.24■■□□□ 1.47
LRRFIP1-215ENST00000498053 RBM6P78332 1123 aaKnown RBP24.23■■□□□ 1.47
LRRFIP1-215ENST00000498053 RGS12O14924 1447 aa24.23■■□□□ 1.47
LRRFIP1-215ENST00000498053 EVA1CP58658 441 aa24.22■■□□□ 1.47
LRRFIP1-215ENST00000498053 EMILIN1Q9Y6C2 1016 aa24.22■■□□□ 1.47
LRRFIP1-215ENST00000498053 MORC1Q86VD1 984 aa24.21■■□□□ 1.47
LRRFIP1-215ENST00000498053 SPATA31A5Q5VU36 1347 aa24.2■■□□□ 1.46
LRRFIP1-215ENST00000498053 SPATA31A7Q8IWB4 1347 aa24.2■■□□□ 1.46
LRRFIP1-215ENST00000498053 HOXC9P31274 260 aa24.2■■□□□ 1.46
LRRFIP1-215ENST00000498053 AMPHP49418 695 aa24.2■■□□□ 1.46
LRRFIP1-215ENST00000498053 DDX10Q13206 875 aaKnown RBP24.2■■□□□ 1.46
LRRFIP1-215ENST00000498053 USP35Q9P2H5 1018 aa24.2■■□□□ 1.46
LRRFIP1-215ENST00000498053 RGPD2P0DJD1 1756 aa24.2■■□□□ 1.46
LRRFIP1-215ENST00000498053 RTL1A6NKG5 1358 aa24.19■■□□□ 1.46
LRRFIP1-215ENST00000498053 IP6K1Q92551 441 aa24.19■■□□□ 1.46
LRRFIP1-215ENST00000498053 BLMP54132 1417 aaPredicted RBP24.18■■□□□ 1.46
LRRFIP1-215ENST00000498053 SPATA31A1Q5TZJ5 1347 aa24.18■■□□□ 1.46
LRRFIP1-215ENST00000498053 WNK3Q9BYP7 1800 aa24.18■■□□□ 1.46
LRRFIP1-215ENST00000498053 CRB1P82279 1406 aa24.18■■□□□ 1.46
LRRFIP1-215ENST00000498053 ERBB3P21860 1342 aa24.17■■□□□ 1.46
LRRFIP1-215ENST00000498053 WDR17Q8IZU2 1322 aa24.17■■□□□ 1.46
LRRFIP1-215ENST00000498053 LTV1Q96GA3 475 aaPredicted RBP24.17■■□□□ 1.46
LRRFIP1-215ENST00000498053 CDK12Q9NYV4 1490 aaPredicted RBP24.16■■□□□ 1.46
LRRFIP1-215ENST00000498053 PPM1GO15355 546 aaPredicted RBP24.16■■□□□ 1.46
LRRFIP1-215ENST00000498053 CSB-PGBD3P0DP91 1061 aa24.16■■□□□ 1.46
LRRFIP1-215ENST00000498053 ANKRD24Q8TF21 1146 aa24.16■■□□□ 1.46
LRRFIP1-215ENST00000498053 BRWD3Q6RI45 1802 aa24.16■■□□□ 1.46
LRRFIP1-215ENST00000498053 FLT4P35916 1363 aa24.16■■□□□ 1.46
LRRFIP1-215ENST00000498053 NPC1L1Q9UHC9 1359 aa24.16■■□□□ 1.46
LRRFIP1-215ENST00000498053 FAM208AQ9UK61 1670 aaKnown RBP24.15■■□□□ 1.46
LRRFIP1-215ENST00000498053 THSD7AQ9UPZ6 1657 aa24.15■■□□□ 1.46
LRRFIP1-215ENST00000498053 ZNF316A6NFI3 1004 aaPredicted RBP24.15■■□□□ 1.46
LRRFIP1-215ENST00000498053 FAM98CQ17RN3 349 aaKnown RBP24.15■■□□□ 1.46
LRRFIP1-215ENST00000498053 TOM1L2Q6ZVM7 507 aa24.15■■□□□ 1.46
LRRFIP1-215ENST00000498053 POLKQ9UBT6 870 aa24.15■■□□□ 1.46
LRRFIP1-215ENST00000498053 HSP90AB2PQ58FF8 381 aa24.14■■□□□ 1.45
LRRFIP1-215ENST00000498053 SMG6Q86US8 1419 aaKnown RBP24.14■■□□□ 1.45
LRRFIP1-215ENST00000498053 A0A0G2JS52 829 aa24.1■■□□□ 1.45
LRRFIP1-215ENST00000498053 MYT1Q01538 1121 aa24.1■■□□□ 1.45
LRRFIP1-215ENST00000498053 INSRP06213 1382 aa24.1■■□□□ 1.45
LRRFIP1-215ENST00000498053 KIF24Q5T7B8 1368 aa24.1■■□□□ 1.45
LRRFIP1-215ENST00000498053 TCP11L2Q8N4U5 519 aa24.09■■□□□ 1.45
LRRFIP1-215ENST00000498053 NLRP2Q9NX02 1062 aa24.09■■□□□ 1.45
LRRFIP1-215ENST00000498053 SEPT12Q8IYM1 358 aa24.08■■□□□ 1.45
LRRFIP1-215ENST00000498053 LRRC37A3O60309 1634 aa24.07■■□□□ 1.44
LRRFIP1-215ENST00000498053 PARP4Q9UKK3 1724 aaKnown RBP24.07■■□□□ 1.44
LRRFIP1-215ENST00000498053 CARD10Q9BWT7 1032 aa24.06■■□□□ 1.44
LRRFIP1-215ENST00000498053 ONECUT3O60422 494 aaPredicted RBP24.05■■□□□ 1.44
LRRFIP1-215ENST00000498053 DISP2A7MBM2 1401 aa24.04■■□□□ 1.44
LRRFIP1-215ENST00000498053 BARGINQ6ZT62 677 aa24.04■■□□□ 1.44
LRRFIP1-215ENST00000498053 USHBP1Q8N6Y0 703 aa24.04■■□□□ 1.44
LRRFIP1-215ENST00000498053 THRAP3Q9Y2W1 955 aaKnown RBP24.03■■□□□ 1.44
LRRFIP1-215ENST00000498053 MTHFSP49914 203 aa24.02■■□□□ 1.44
LRRFIP1-215ENST00000498053 NBPF6Q5VWK0 638 aa24.02■■□□□ 1.44
LRRFIP1-215ENST00000498053 NBPF4Q96M43 638 aa24.02■■□□□ 1.44
LRRFIP1-215ENST00000498053 PARD3Q8TEW0 1356 aa24.02■■□□□ 1.44
LRRFIP1-215ENST00000498053 EIF4A2Q14240 407 aaKnown RBP24.01■■□□□ 1.43
LRRFIP1-215ENST00000498053 COL3A1P02461 1466 aaPredicted RBP23.99■■□□□ 1.43
LRRFIP1-215ENST00000498053 MEGF6O75095 1541 aa23.99■■□□□ 1.43
LRRFIP1-215ENST00000498053 PPP2R1AP30153 589 aa23.98■■□□□ 1.43
LRRFIP1-215ENST00000498053 FAM182BQ5T319 152 aa23.98■■□□□ 1.43
LRRFIP1-215ENST00000498053 RGPD1P0DJD0 1748 aa23.98■■□□□ 1.43
LRRFIP1-215ENST00000498053 KRT27Q7Z3Y8 459 aa23.96■■□□□ 1.43
LRRFIP1-215ENST00000498053 SHANK3Q9BYB0 1731 aa23.96■■□□□ 1.43
LRRFIP1-215ENST00000498053 IL2RBP14784 551 aa23.95■■□□□ 1.42
LRRFIP1-215ENST00000498053 EYA1Q99502 592 aa23.95■■□□□ 1.42
LRRFIP1-215ENST00000498053 NCAPD2Q15021 1401 aa23.94■■□□□ 1.42
LRRFIP1-215ENST00000498053 TNS2Q63HR2 1409 aa23.94■■□□□ 1.42
LRRFIP1-215ENST00000498053 EP400Q96L91 3159 aa23.94■■□□□ 1.42
LRRFIP1-215ENST00000498053 IL13P35225 146 aa23.92■■□□□ 1.42
LRRFIP1-215ENST00000498053 DDB1Q16531 1140 aa23.92■■□□□ 1.42
LRRFIP1-215ENST00000498053 IGSF1Q8N6C5 1336 aa23.91■■□□□ 1.42
LRRFIP1-215ENST00000498053 CDCA7Q9BWT1 371 aaPredicted RBP23.91■■□□□ 1.42
LRRFIP1-215ENST00000498053 OVOS2A0A0G2JMS6 1433 aa23.9■■□□□ 1.42
LRRFIP1-215ENST00000498053 PDE3BQ13370 1112 aa23.89■■□□□ 1.41
LRRFIP1-215ENST00000498053 AEBP1Q8IUX7 1158 aa23.89■■□□□ 1.41
LRRFIP1-215ENST00000498053 PKD1L3Q7Z443 1732 aa23.88■■□□□ 1.41
LRRFIP1-215ENST00000498053 SOCS7O14512 581 aa23.87■■□□□ 1.41
LRRFIP1-215ENST00000498053 DIAPH1O60610 1272 aaKnown RBP23.87■■□□□ 1.41
LRRFIP1-215ENST00000498053 RALBP1Q15311 655 aa23.87■■□□□ 1.41
LRRFIP1-215ENST00000498053 MARCH10Q8NA82 808 aaPredicted RBP23.86■■□□□ 1.41
LRRFIP1-215ENST00000498053 RAPGEF4Q8WZA2 1011 aa23.86■■□□□ 1.41
LRRFIP1-215ENST00000498053 PRKRIP1Q9H875 184 aaPredicted RBP23.86■■□□□ 1.41
LRRFIP1-215ENST00000498053 EXOC5O00471 708 aa23.85■■□□□ 1.41
LRRFIP1-215ENST00000498053 TATP17735 454 aaPredicted RBP23.85■■□□□ 1.41
LRRFIP1-215ENST00000498053 SBF2Q86WG5 1849 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms