RNA–Protein interactions for RNA: ENST00000498035.5

HM13-224, Transcript of histocompatibility minor 13, human

TSL 2 BASIC

Gene HM13, Length 3,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HM13-224	ENST00000498035	GPATCH3	Q96I76	525 aa		10.82	□□□□□ -0.68
HM13-224	ENST00000498035	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.82	□□□□□ -0.68
HM13-224	ENST00000498035	WWC3	Q9ULE0	1092 aa		10.82	□□□□□ -0.68
HM13-224	ENST00000498035	ADAMTS8	Q9UP79	889 aa		10.82	□□□□□ -0.68
HM13-224	ENST00000498035	PZP	P20742	1482 aa		10.82	□□□□□ -0.68
HM13-224	ENST00000498035	TRAPPC8	Q9Y2L5	1435 aa		10.82	□□□□□ -0.68
HM13-224	ENST00000498035	MSL3	Q8N5Y2	521 aa	Known RBP	10.81	□□□□□ -0.68
HM13-224	ENST00000498035	RRP1	P56182	461 aa	Known RBP	10.81	□□□□□ -0.68
HM13-224	ENST00000498035	ISY1	Q9ULR0	285 aa	Known RBP	10.81	□□□□□ -0.68
HM13-224	ENST00000498035	SREK1	Q8WXA9	508 aa	Known RBP	10.81	□□□□□ -0.68
HM13-224	ENST00000498035	HMGB1P1	B2RPK0	211 aa	Predicted RBP	10.8	□□□□□ -0.68
HM13-224	ENST00000498035	PPP2R1A	P30153	589 aa		10.8	□□□□□ -0.68
HM13-224	ENST00000498035	ZRSR2	Q15696	482 aa	Known RBP	10.8	□□□□□ -0.68
HM13-224	ENST00000498035	SLC12A5	Q9H2X9	1139 aa		10.8	□□□□□ -0.68
HM13-224	ENST00000498035	CABP2	Q9NPB3	220 aa		10.8	□□□□□ -0.68
HM13-224	ENST00000498035	AMOTL2	Q9Y2J4	779 aa		10.8	□□□□□ -0.68
HM13-224	ENST00000498035	EID1	Q9Y6B2	187 aa		10.8	□□□□□ -0.68
HM13-224	ENST00000498035	RPGRIP1L	Q68CZ1	1315 aa		10.8	□□□□□ -0.68
HM13-224	ENST00000498035	CSPP1	Q1MSJ5	1256 aa		10.8	□□□□□ -0.68
HM13-224	ENST00000498035	EP400NL	Q6ZTU2	488 aa		10.8	□□□□□ -0.68
HM13-224	ENST00000498035	SHANK2	Q9UPX8	1470 aa		10.8	□□□□□ -0.68
HM13-224	ENST00000498035	EXOC6	Q8TAG9	804 aa		10.79	□□□□□ -0.68
HM13-224	ENST00000498035	ABCC2	Q92887	1545 aa		10.79	□□□□□ -0.68
HM13-224	ENST00000498035	ASXL2	Q76L83	1435 aa		10.79	□□□□□ -0.68
HM13-224	ENST00000498035	PRR29	P0C7W0	189 aa		10.79	□□□□□ -0.68
HM13-224	ENST00000498035	CDCA7L	Q96GN5	454 aa		10.79	□□□□□ -0.68
HM13-224	ENST00000498035	DHX29	Q7Z478	1369 aa	Known RBP	10.79	□□□□□ -0.68
HM13-224	ENST00000498035	DENND4B	O75064	1496 aa	Predicted RBP	10.79	□□□□□ -0.68
HM13-224	ENST00000498035	ADGRL2	O95490	1459 aa		10.79	□□□□□ -0.68
HM13-224	ENST00000498035	IPO8	O15397	1037 aa	Known RBP	10.78	□□□□□ -0.68
HM13-224	ENST00000498035	UBA5	Q9GZZ9	404 aa		10.78	□□□□□ -0.68
HM13-224	ENST00000498035	FAM135A	Q9P2D6	1515 aa		10.78	□□□□□ -0.68
HM13-224	ENST00000498035	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.78	□□□□□ -0.68
HM13-224	ENST00000498035	MS4A1	P11836	297 aa		10.78	□□□□□ -0.68
HM13-224	ENST00000498035	TTC30B	Q8N4P2	665 aa		10.78	□□□□□ -0.68
HM13-224	ENST00000498035	IVNS1ABP	Q9Y6Y0	642 aa		10.78	□□□□□ -0.68
HM13-224	ENST00000498035	ADGRF5	Q8IZF2	1346 aa		10.78	□□□□□ -0.68
HM13-224	ENST00000498035	PPP4R3B	Q5MIZ7	849 aa		10.78	□□□□□ -0.68
HM13-224	ENST00000498035	IGSF5	Q9NSI5	407 aa		10.78	□□□□□ -0.68
HM13-224	ENST00000498035	TPX2	Q9ULW0	747 aa	Known RBP	10.77	□□□□□ -0.69
HM13-224	ENST00000498035	DUOX2	Q9NRD8	1548 aa		10.77	□□□□□ -0.69
HM13-224	ENST00000498035	G3BP2	Q9UN86	482 aa	Known RBP	10.77	□□□□□ -0.69
HM13-224	ENST00000498035	WDR7	Q9Y4E6	1490 aa		10.77	□□□□□ -0.69
HM13-224	ENST00000498035	TERF1	P54274	439 aa		10.77	□□□□□ -0.69
HM13-224	ENST00000498035	RNF217	Q8TC41	542 aa		10.77	□□□□□ -0.69
HM13-224	ENST00000498035	ERICH4	A6NGS2	130 aa		10.76	□□□□□ -0.69
HM13-224	ENST00000498035	GGNBP2	Q9H3C7	697 aa		10.76	□□□□□ -0.69
HM13-224	ENST00000498035	NUB1	Q9Y5A7	615 aa		10.76	□□□□□ -0.69
HM13-224	ENST00000498035	CCDC189	A1A4V9	331 aa		10.76	□□□□□ -0.69
HM13-224	ENST00000498035	PES1	O00541	588 aa	Known RBP	10.76	□□□□□ -0.69
HM13-224	ENST00000498035	NAP1L1	P55209	391 aa	Known RBP	10.76	□□□□□ -0.69
HM13-224	ENST00000498035	MTHFS	P49914	203 aa		10.75	□□□□□ -0.69
HM13-224	ENST00000498035	MFSD4B	Q5TF39	518 aa		10.75	□□□□□ -0.69
HM13-224	ENST00000498035	RPAIN	Q86UA6	219 aa		10.75	□□□□□ -0.69
HM13-224	ENST00000498035	ABCA8	O94911	1581 aa		10.75	□□□□□ -0.69
HM13-224	ENST00000498035	HSCB	Q8IWL3	235 aa		10.75	□□□□□ -0.69
HM13-224	ENST00000498035	PRAM1	Q96QH2	718 aa		10.75	□□□□□ -0.69
HM13-224	ENST00000498035	RALGAPB	Q86X10	1494 aa		10.75	□□□□□ -0.69
HM13-224	ENST00000498035	KDM6B	O15054	1643 aa		10.75	□□□□□ -0.69
HM13-224	ENST00000498035	ABCC10	Q5T3U5	1492 aa		10.75	□□□□□ -0.69
HM13-224	ENST00000498035	DDRGK1	Q96HY6	314 aa		10.75	□□□□□ -0.69
HM13-224	ENST00000498035	BCL2L13	Q9BXK5	485 aa		10.75	□□□□□ -0.69
HM13-224	ENST00000498035	PAK3	O75914	559 aa	Predicted RBP	10.74	□□□□□ -0.69
HM13-224	ENST00000498035	CRBN	Q96SW2	442 aa		10.74	□□□□□ -0.69
HM13-224	ENST00000498035	TEX14	Q8IWB6	1497 aa		10.74	□□□□□ -0.69
HM13-224	ENST00000498035	MPHOSPH10	O00566	681 aa	Known RBP	10.74	□□□□□ -0.69
HM13-224	ENST00000498035	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.74	□□□□□ -0.69
HM13-224	ENST00000498035	CLEC4G	Q6UXB4	293 aa		10.74	□□□□□ -0.69
HM13-224	ENST00000498035	FAM43A	Q8N2R8	423 aa		10.74	□□□□□ -0.69
HM13-224	ENST00000498035	NGDN	Q8NEJ9	315 aa	Known RBP	10.74	□□□□□ -0.69
HM13-224	ENST00000498035	ARHGEF10L	Q9HCE6	1279 aa		10.74	□□□□□ -0.69
HM13-224	ENST00000498035	PUF60	Q9UHX1	559 aa	Known RBP	10.74	□□□□□ -0.69
HM13-224	ENST00000498035	GCC2	Q8IWJ2	1684 aa		10.74	□□□□□ -0.69
HM13-224	ENST00000498035	C11orf96	Q7Z7L8	435 aa		10.74	□□□□□ -0.69
HM13-224	ENST00000498035	PRAG1	Q86YV5	1406 aa		10.73	□□□□□ -0.69
HM13-224	ENST00000498035	LIG1	P18858	919 aa		10.73	□□□□□ -0.69
HM13-224	ENST00000498035	NEXN	Q0ZGT2	675 aa		10.73	□□□□□ -0.69
HM13-224	ENST00000498035	IDI1	Q13907	227 aa		10.73	□□□□□ -0.69
HM13-224	ENST00000498035	PDCL3	Q9H2J4	239 aa		10.73	□□□□□ -0.69
HM13-224	ENST00000498035	SMC4	Q9NTJ3	1288 aa		10.73	□□□□□ -0.69
HM13-224	ENST00000498035	MTA1	Q13330	715 aa		10.73	□□□□□ -0.69
HM13-224	ENST00000498035	ACRBP	Q8NEB7	543 aa		10.73	□□□□□ -0.69
HM13-224	ENST00000498035	POM121	Q96HA1	1249 aa		10.73	□□□□□ -0.69
HM13-224	ENST00000498035	NOP58	Q9Y2X3	529 aa	Known RBP	10.73	□□□□□ -0.69
HM13-224	ENST00000498035	DISP3	Q9P2K9	1392 aa		10.73	□□□□□ -0.69
HM13-224	ENST00000498035	NKX1-1	Q15270	411 aa	Predicted RBP	10.73	□□□□□ -0.69
HM13-224	ENST00000498035	NBPF10	Q6P3W6	841 aa	Known RBP	10.73	□□□□□ -0.69
HM13-224	ENST00000498035	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.73	□□□□□ -0.69
HM13-224	ENST00000498035	BDNF	P23560	247 aa		10.72	□□□□□ -0.69
HM13-224	ENST00000498035	APLP1	P51693	650 aa		10.72	□□□□□ -0.69
HM13-224	ENST00000498035	MBD5	Q9P267	1494 aa		10.72	□□□□□ -0.69
HM13-224	ENST00000498035	FLII	Q13045	1269 aa		10.72	□□□□□ -0.69
HM13-224	ENST00000498035	MYCBP	Q99417	103 aa	Predicted RBP	10.72	□□□□□ -0.69
HM13-224	ENST00000498035	DMRT2	Q9Y5R5	561 aa		10.72	□□□□□ -0.69
HM13-224	ENST00000498035	CCDC194	A0A1B0GVG4	234 aa		10.72	□□□□□ -0.69
HM13-224	ENST00000498035	PUS10	Q3MIT2	529 aa	Known RBP	10.72	□□□□□ -0.69
HM13-224	ENST00000498035	RUNDC1	Q96C34	613 aa		10.72	□□□□□ -0.69
HM13-224	ENST00000498035	COG3	Q96JB2	828 aa		10.72	□□□□□ -0.69
HM13-224	ENST00000498035	CALR3	Q96L12	384 aa	Known RBP	10.72	□□□□□ -0.69
HM13-224	ENST00000498035	FANCI	Q9NVI1	1328 aa		10.72	□□□□□ -0.69

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