RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 ATF5Q9Y2D1 282 aaPredicted RBP27.05■■□□□ 1.92
ACTN4-208ENST00000497637 RGPD3A6NKT7 1758 aaPredicted RBP27.04■■□□□ 1.92
ACTN4-208ENST00000497637 RGPD4Q7Z3J3 1758 aa27.04■■□□□ 1.92
ACTN4-208ENST00000497637 CPDO75976 1380 aa27.04■■□□□ 1.92
ACTN4-208ENST00000497637 CEP350Q5VT06 3117 aa27.03■■□□□ 1.92
ACTN4-208ENST00000497637 CASZ1Q86V15 1759 aa27.03■■□□□ 1.92
ACTN4-208ENST00000497637 PDGFDQ9GZP0 370 aaPredicted RBP27.03■■□□□ 1.92
ACTN4-208ENST00000497637 TRAK1Q9UPV9 953 aa27.03■■□□□ 1.92
ACTN4-208ENST00000497637 GIGYF1O75420 1035 aaPredicted RBP27.02■■□□□ 1.92
ACTN4-208ENST00000497637 PRKRIP1Q9H875 184 aaPredicted RBP27.02■■□□□ 1.92
ACTN4-208ENST00000497637 CDCA8Q53HL2 280 aa27.01■■□□□ 1.91
ACTN4-208ENST00000497637 MTFR1LQ9H019 292 aa27.01■■□□□ 1.91
ACTN4-208ENST00000497637 STK32BQ9NY57 414 aa27.01■■□□□ 1.91
ACTN4-208ENST00000497637 ADGRB1O14514 1584 aa27.01■■□□□ 1.91
ACTN4-208ENST00000497637 CHD4Q14839 1912 aa27■■□□□ 1.91
ACTN4-208ENST00000497637 NUTM2GQ5VZR2 741 aa27■■□□□ 1.91
ACTN4-208ENST00000497637 PROM2Q8N271 834 aa26.98■■□□□ 1.91
ACTN4-208ENST00000497637 NUDT16Q96DE0 195 aaKnown RBP26.98■■□□□ 1.91
ACTN4-208ENST00000497637 PHRF1Q9P1Y6 1649 aaKnown RBP26.98■■□□□ 1.91
ACTN4-208ENST00000497637 DDB1Q16531 1140 aa26.97■■□□□ 1.91
ACTN4-208ENST00000497637 MYOM1P52179 1685 aa26.97■■□□□ 1.91
ACTN4-208ENST00000497637 PARP4Q9UKK3 1724 aaKnown RBP26.96■■□□□ 1.91
ACTN4-208ENST00000497637 SBNO2Q9Y2G9 1366 aa26.96■■□□□ 1.91
ACTN4-208ENST00000497637 SLC15A2Q16348 729 aa26.95■■□□□ 1.9
ACTN4-208ENST00000497637 ABTB2Q8N961 1025 aa26.95■■□□□ 1.9
ACTN4-208ENST00000497637 CRB1P82279 1406 aa26.94■■□□□ 1.9
ACTN4-208ENST00000497637 SGIP1Q9BQI5 828 aa26.94■■□□□ 1.9
ACTN4-208ENST00000497637 MAP3K5Q99683 1374 aa26.94■■□□□ 1.9
ACTN4-208ENST00000497637 ARXQ96QS3 562 aa26.93■■□□□ 1.9
ACTN4-208ENST00000497637 BCL9O00512 1426 aa26.92■■□□□ 1.9
ACTN4-208ENST00000497637 POLR3AO14802 1390 aaPredicted RBP26.92■■□□□ 1.9
ACTN4-208ENST00000497637 USP19O94966 1318 aa26.91■■□□□ 1.9
ACTN4-208ENST00000497637 CENPJQ9HC77 1338 aaPredicted RBP26.91■■□□□ 1.9
ACTN4-208ENST00000497637 PEAK1Q9H792 1746 aa26.91■■□□□ 1.9
ACTN4-208ENST00000497637 GPR162Q16538 588 aa26.91■■□□□ 1.9
ACTN4-208ENST00000497637 TXNRD1Q16881 649 aa26.91■■□□□ 1.9
ACTN4-208ENST00000497637 NLRP13Q86W25 1043 aa26.91■■□□□ 1.9
ACTN4-208ENST00000497637 COL5A2P05997 1499 aaPredicted RBP26.91■■□□□ 1.9
ACTN4-208ENST00000497637 LMO7Q8WWI1 1683 aa26.9■■□□□ 1.9
ACTN4-208ENST00000497637 GCP02774 474 aa26.9■■□□□ 1.9
ACTN4-208ENST00000497637 CDCA7Q9BWT1 371 aaPredicted RBP26.9■■□□□ 1.9
ACTN4-208ENST00000497637 ACEP12821 1306 aa26.89■■□□□ 1.89
ACTN4-208ENST00000497637 PTF1AQ7RTS3 328 aa26.88■■□□□ 1.89
ACTN4-208ENST00000497637 CCDC61Q9Y6R9 512 aa26.88■■□□□ 1.89
ACTN4-208ENST00000497637 KTN1Q86UP2 1357 aaKnown RBP26.87■■□□□ 1.89
ACTN4-208ENST00000497637 PER1O15534 1290 aaPredicted RBP26.87■■□□□ 1.89
ACTN4-208ENST00000497637 ITSN1Q15811 1721 aa26.87■■□□□ 1.89
ACTN4-208ENST00000497637 PLEKHG3A1L390 1219 aa26.86■■□□□ 1.89
ACTN4-208ENST00000497637 AATKQ6ZMQ8 1374 aa26.85■■□□□ 1.89
ACTN4-208ENST00000497637 PANK3Q9H999 370 aa26.85■■□□□ 1.89
ACTN4-208ENST00000497637 SBF2Q86WG5 1849 aa26.84■■□□□ 1.89
ACTN4-208ENST00000497637 RALBP1Q15311 655 aa26.83■■□□□ 1.89
ACTN4-208ENST00000497637 TOM1L2Q6ZVM7 507 aa26.83■■□□□ 1.89
ACTN4-208ENST00000497637 MARCH10Q8NA82 808 aaPredicted RBP26.83■■□□□ 1.89
ACTN4-208ENST00000497637 CDK19Q9BWU1 502 aa26.83■■□□□ 1.89
ACTN4-208ENST00000497637 PUS7Q96PZ0 661 aaKnown RBP26.81■■□□□ 1.88
ACTN4-208ENST00000497637 LRRC37A3O60309 1634 aa26.79■■□□□ 1.88
ACTN4-208ENST00000497637 CCDC184Q52MB2 194 aa26.78■■□□□ 1.88
ACTN4-208ENST00000497637 BRD4O60885 1362 aaPredicted RBP26.77■■□□□ 1.88
ACTN4-208ENST00000497637 MRS2Q9HD23 443 aa26.76■■□□□ 1.87
ACTN4-208ENST00000497637 GOLGB1Q14789 3259 aaKnown RBP26.74■■□□□ 1.87
ACTN4-208ENST00000497637 WDR17Q8IZU2 1322 aa26.74■■□□□ 1.87
ACTN4-208ENST00000497637 ZBTB7CA1YPR0 619 aa26.74■■□□□ 1.87
ACTN4-208ENST00000497637 EXOC5O00471 708 aa26.74■■□□□ 1.87
ACTN4-208ENST00000497637 ARHGEF28Q8N1W1 1705 aaKnown RBP26.73■■□□□ 1.87
ACTN4-208ENST00000497637 QRICH2Q9H0J4 1663 aa26.73■■□□□ 1.87
ACTN4-208ENST00000497637 POLD1P28340 1107 aa26.72■■□□□ 1.87
ACTN4-208ENST00000497637 SLC16A10Q8TF71 515 aa26.72■■□□□ 1.87
ACTN4-208ENST00000497637 EVC2Q86UK5 1308 aa26.71■■□□□ 1.87
ACTN4-208ENST00000497637 MYBBP1AQ9BQG0 1328 aaKnown RBP26.71■■□□□ 1.87
ACTN4-208ENST00000497637 GRIN3BO60391 1043 aa26.71■■□□□ 1.87
ACTN4-208ENST00000497637 PELP1Q8IZL8 1130 aaKnown RBP26.71■■□□□ 1.87
ACTN4-208ENST00000497637 CARD10Q9BWT7 1032 aa26.7■■□□□ 1.86
ACTN4-208ENST00000497637 NLRP6P59044 892 aa26.69■■□□□ 1.86
ACTN4-208ENST00000497637 KNSTRNQ9Y448 316 aa26.69■■□□□ 1.86
ACTN4-208ENST00000497637 NPC1L1Q9UHC9 1359 aa26.68■■□□□ 1.86
ACTN4-208ENST00000497637 KLHL34Q8N239 644 aa26.67■■□□□ 1.86
ACTN4-208ENST00000497637 CNGB1Q14028 1251 aaPredicted RBP26.66■■□□□ 1.86
ACTN4-208ENST00000497637 TOPAZ1Q8N9V7 1692 aa26.66■■□□□ 1.86
ACTN4-208ENST00000497637 AXIN2Q9Y2T1 843 aa26.65■■□□□ 1.86
ACTN4-208ENST00000497637 CSB-PGBD3P0DP91 1061 aa26.64■■□□□ 1.86
ACTN4-208ENST00000497637 HSPA6P17066 643 aa26.64■■□□□ 1.86
ACTN4-208ENST00000497637 AMER1Q5JTC6 1135 aaPredicted RBP26.64■■□□□ 1.86
ACTN4-208ENST00000497637 AKAP12Q02952 1782 aa26.63■■□□□ 1.85
ACTN4-208ENST00000497637 SHANK3Q9BYB0 1731 aa26.62■■□□□ 1.85
ACTN4-208ENST00000497637 CC2D1BQ5T0F9 858 aaKnown RBP26.61■■□□□ 1.85
ACTN4-208ENST00000497637 PPIP5K1Q6PFW1 1433 aa26.61■■□□□ 1.85
ACTN4-208ENST00000497637 SRPK2P78362 688 aaKnown RBP26.6■■□□□ 1.85
ACTN4-208ENST00000497637 TMC1Q8TDI8 760 aa26.6■■□□□ 1.85
ACTN4-208ENST00000497637 SLIT3O75094 1523 aa26.6■■□□□ 1.85
ACTN4-208ENST00000497637 ZNF827Q17R98 1081 aa26.59■■□□□ 1.85
ACTN4-208ENST00000497637 GPBP1L1Q9HC44 474 aaPredicted RBP26.59■■□□□ 1.85
ACTN4-208ENST00000497637 ARHGEF25Q86VW2 580 aa26.58■■□□□ 1.85
ACTN4-208ENST00000497637 FAM9BQ8IZU0 186 aa26.58■■□□□ 1.85
ACTN4-208ENST00000497637 KCNH5Q8NCM2 988 aa26.58■■□□□ 1.85
ACTN4-208ENST00000497637 PNISRQ8TF01 805 aaKnown RBP26.57■■□□□ 1.84
ACTN4-208ENST00000497637 CARD14Q9BXL6 1004 aa26.57■■□□□ 1.84
ACTN4-208ENST00000497637 CPSF1Q10570 1443 aaKnown RBP26.56■■□□□ 1.84
ACTN4-208ENST00000497637 TNS2Q63HR2 1409 aa26.56■■□□□ 1.84
ACTN4-208ENST00000497637 SLC27A3Q5K4L6 730 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms