RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 HAP1P54257 671 aaPredicted RBP27.38■■□□□ 1.97
CTSD-206ENST00000497544 GGNBP2Q9H3C7 697 aa27.38■■□□□ 1.97
CTSD-206ENST00000497544 CABLES1Q8TDN4 633 aa27.37■■□□□ 1.97
CTSD-206ENST00000497544 COG3Q96JB2 828 aa27.37■■□□□ 1.97
CTSD-206ENST00000497544 NUP188Q5SRE5 1749 aa27.36■■□□□ 1.97
CTSD-206ENST00000497544 ZNF784Q8NCA9 323 aaPredicted RBP27.36■■□□□ 1.97
CTSD-206ENST00000497544 CAMKK2Q96RR4 588 aa27.36■■□□□ 1.97
CTSD-206ENST00000497544 DCAF8L1A6NGE4 600 aa27.35■■□□□ 1.97
CTSD-206ENST00000497544 USP31Q70CQ4 1352 aa27.35■■□□□ 1.97
CTSD-206ENST00000497544 PIK3C2AO00443 1686 aa27.34■■□□□ 1.97
CTSD-206ENST00000497544 THSD7AQ9UPZ6 1657 aa27.33■■□□□ 1.97
CTSD-206ENST00000497544 KIF20BQ96Q89 1820 aa27.32■■□□□ 1.96
CTSD-206ENST00000497544 AMER1Q5JTC6 1135 aaPredicted RBP27.31■■□□□ 1.96
CTSD-206ENST00000497544 PPP1R1BQ9UD71 204 aaPredicted RBP27.31■■□□□ 1.96
CTSD-206ENST00000497544 GCP02774 474 aa27.3■■□□□ 1.96
CTSD-206ENST00000497544 CNGB1Q14028 1251 aaPredicted RBP27.3■■□□□ 1.96
CTSD-206ENST00000497544 KCNH5Q8NCM2 988 aa27.3■■□□□ 1.96
CTSD-206ENST00000497544 USP19O94966 1318 aa27.3■■□□□ 1.96
CTSD-206ENST00000497544 SOX12O15370 315 aa27.29■■□□□ 1.96
CTSD-206ENST00000497544 CC2D1BQ5T0F9 858 aaKnown RBP27.29■■□□□ 1.96
CTSD-206ENST00000497544 NSD2O96028 1365 aa27.29■■□□□ 1.96
CTSD-206ENST00000497544 FAM83GA6ND36 823 aa27.27■■□□□ 1.96
CTSD-206ENST00000497544 MORC1Q86VD1 984 aa27.27■■□□□ 1.96
CTSD-206ENST00000497544 OVOS2A0A0J9YW53 1432 aa27.26■■□□□ 1.95
CTSD-206ENST00000497544 OVOS2Q6IE36 1432 aa27.26■■□□□ 1.95
CTSD-206ENST00000497544 PARD3Q8TEW0 1356 aa27.26■■□□□ 1.95
CTSD-206ENST00000497544 C1QTNF8P60827 252 aa27.26■■□□□ 1.95
CTSD-206ENST00000497544 NPC1L1Q9UHC9 1359 aa27.25■■□□□ 1.95
CTSD-206ENST00000497544 ZC3H6P61129 1189 aaKnown RBP27.25■■□□□ 1.95
CTSD-206ENST00000497544 SPON1Q9HCB6 807 aa27.25■■□□□ 1.95
CTSD-206ENST00000497544 UTRNP46939 3433 aa27.25■■□□□ 1.95
CTSD-206ENST00000497544 TRIM37O94972 964 aa27.23■■□□□ 1.95
CTSD-206ENST00000497544 USP54Q70EL1 1684 aa27.23■■□□□ 1.95
CTSD-206ENST00000497544 SLIT3O75094 1523 aa27.22■■□□□ 1.95
CTSD-206ENST00000497544 PHRF1Q9P1Y6 1649 aaKnown RBP27.21■■□□□ 1.95
CTSD-206ENST00000497544 ZBTB7CA1YPR0 619 aa27.21■■□□□ 1.95
CTSD-206ENST00000497544 KCNQ2O43526 872 aa27.21■■□□□ 1.95
CTSD-206ENST00000497544 TNNT2P45379 298 aaPredicted RBP27.21■■□□□ 1.95
CTSD-206ENST00000497544 CRYBG1Q9Y4K1 1723 aa27.21■■□□□ 1.95
CTSD-206ENST00000497544 COL14A1Q05707 1796 aaKnown RBP27.2■■□□□ 1.95
CTSD-206ENST00000497544 ANKRD26Q9UPS8 1709 aa27.2■■□□□ 1.94
CTSD-206ENST00000497544 CHD4Q14839 1912 aa27.2■■□□□ 1.94
CTSD-206ENST00000497544 APBA3O96018 575 aa27.19■■□□□ 1.94
CTSD-206ENST00000497544 FBLN1P23142 703 aa27.19■■□□□ 1.94
CTSD-206ENST00000497544 BTG4Q9NY30 223 aa27.19■■□□□ 1.94
CTSD-206ENST00000497544 PRDM11Q9NQV5 511 aa27.18■■□□□ 1.94
CTSD-206ENST00000497544 SPATA31A5Q5VU36 1347 aa27.16■■□□□ 1.94
CTSD-206ENST00000497544 SPATA31A7Q8IWB4 1347 aa27.16■■□□□ 1.94
CTSD-206ENST00000497544 ARHGEF25Q86VW2 580 aa27.16■■□□□ 1.94
CTSD-206ENST00000497544 KIAA0232Q92628 1395 aa27.16■■□□□ 1.94
CTSD-206ENST00000497544 NBPF14Q5TI25 921 aa27.15■■□□□ 1.94
CTSD-206ENST00000497544 CPDO75976 1380 aa27.14■■□□□ 1.94
CTSD-206ENST00000497544 RRS1Q15050 365 aaKnown RBP27.14■■□□□ 1.94
CTSD-206ENST00000497544 CHRNA2Q15822 529 aa27.14■■□□□ 1.94
CTSD-206ENST00000497544 FAM196AQ6ZSG2 479 aa27.13■■□□□ 1.93
CTSD-206ENST00000497544 AATKQ6ZMQ8 1374 aa27.12■■□□□ 1.93
CTSD-206ENST00000497544 NFAT5O94916 1531 aa27.12■■□□□ 1.93
CTSD-206ENST00000497544 MAP2P11137 1827 aaKnown RBP27.12■■□□□ 1.93
CTSD-206ENST00000497544 AMPHP49418 695 aa27.12■■□□□ 1.93
CTSD-206ENST00000497544 CEP350Q5VT06 3117 aa27.12■■□□□ 1.93
CTSD-206ENST00000497544 MAP3K19Q56UN5 1328 aa27.11■■□□□ 1.93
CTSD-206ENST00000497544 CASZ1Q86V15 1759 aa27.1■■□□□ 1.93
CTSD-206ENST00000497544 PPM1GO15355 546 aaPredicted RBP27.1■■□□□ 1.93
CTSD-206ENST00000497544 RALBP1Q15311 655 aa27.1■■□□□ 1.93
CTSD-206ENST00000497544 POLKQ9UBT6 870 aa27.09■■□□□ 1.93
CTSD-206ENST00000497544 LTN1O94822 1766 aa27.07■■□□□ 1.92
CTSD-206ENST00000497544 EMILIN1Q9Y6C2 1016 aa27.07■■□□□ 1.92
CTSD-206ENST00000497544 ANP32CO43423 234 aa27.06■■□□□ 1.92
CTSD-206ENST00000497544 IP6K1Q92551 441 aa27.06■■□□□ 1.92
CTSD-206ENST00000497544 EVA1CP58658 441 aa27.05■■□□□ 1.92
CTSD-206ENST00000497544 MTHFSP49914 203 aa27.04■■□□□ 1.92
CTSD-206ENST00000497544 PRKRIP1Q9H875 184 aaPredicted RBP27.04■■□□□ 1.92
CTSD-206ENST00000497544 PPP2R1AP30153 589 aa27.03■■□□□ 1.92
CTSD-206ENST00000497544 HOXC9P31274 260 aa27.03■■□□□ 1.92
CTSD-206ENST00000497544 AXIN2Q9Y2T1 843 aa27.03■■□□□ 1.92
CTSD-206ENST00000497544 KIF24Q5T7B8 1368 aa27.02■■□□□ 1.92
CTSD-206ENST00000497544 DIEXFQ68CQ4 756 aaKnown RBP27.01■■□□□ 1.91
CTSD-206ENST00000497544 COL18A1P39060 1754 aa27.01■■□□□ 1.91
CTSD-206ENST00000497544 FLT4P35916 1363 aa27■■□□□ 1.91
CTSD-206ENST00000497544 SPATA31A1Q5TZJ5 1347 aa27■■□□□ 1.91
CTSD-206ENST00000497544 STRN4Q9NRL3 753 aa27■■□□□ 1.91
CTSD-206ENST00000497544 RTL1A6NKG5 1358 aa26.99■■□□□ 1.91
CTSD-206ENST00000497544 HSP90AB2PQ58FF8 381 aa26.99■■□□□ 1.91
CTSD-206ENST00000497544 RGPD5Q99666 1765 aa26.99■■□□□ 1.91
CTSD-206ENST00000497544 LTV1Q96GA3 475 aaPredicted RBP26.98■■□□□ 1.91
CTSD-206ENST00000497544 MYBBP1AQ9BQG0 1328 aaKnown RBP26.97■■□□□ 1.91
CTSD-206ENST00000497544 CSB-PGBD3P0DP91 1061 aa26.97■■□□□ 1.91
CTSD-206ENST00000497544 ABCC6O95255 1503 aa26.96■■□□□ 1.91
CTSD-206ENST00000497544 LMO7Q8WWI1 1683 aa26.96■■□□□ 1.91
CTSD-206ENST00000497544 ANKRD24Q8TF21 1146 aa26.96■■□□□ 1.91
CTSD-206ENST00000497544 RGPD3A6NKT7 1758 aaPredicted RBP26.96■■□□□ 1.91
CTSD-206ENST00000497544 RGPD4Q7Z3J3 1758 aa26.96■■□□□ 1.91
CTSD-206ENST00000497544 INSRP06213 1382 aa26.96■■□□□ 1.91
CTSD-206ENST00000497544 CFAP53Q96M91 514 aa26.95■■□□□ 1.9
CTSD-206ENST00000497544 PEAK1Q9H792 1746 aa26.95■■□□□ 1.9
CTSD-206ENST00000497544 SMG6Q86US8 1419 aaKnown RBP26.94■■□□□ 1.9
CTSD-206ENST00000497544 TOM1L2Q6ZVM7 507 aa26.92■■□□□ 1.9
CTSD-206ENST00000497544 PDGFDQ9GZP0 370 aaPredicted RBP26.92■■□□□ 1.9
CTSD-206ENST00000497544 ANO8Q9HCE9 1232 aaPredicted RBP26.92■■□□□ 1.9
CTSD-206ENST00000497544 COL5A2P05997 1499 aaPredicted RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms