RNA–Protein interactions for RNA: ENST00000497107.1

ITGA6-211, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-211ENST00000497107 PPP2R2DQ66LE6 453 aa9.27□□□□□ -0.93
ITGA6-211ENST00000497107 PROCA1Q8NCQ7 364 aaPredicted RBP9.27□□□□□ -0.93
ITGA6-211ENST00000497107 HELBQ8NG08 1087 aaPredicted RBP9.27□□□□□ -0.93
ITGA6-211ENST00000497107 IFT140Q96RY7 1462 aa9.27□□□□□ -0.93
ITGA6-211ENST00000497107 KANK4Q5T7N3 995 aaPredicted RBP9.26□□□□□ -0.93
ITGA6-211ENST00000497107 NUDT12Q9BQG2 462 aa9.26□□□□□ -0.93
ITGA6-211ENST00000497107 WDR62O43379 1518 aa9.26□□□□□ -0.93
ITGA6-211ENST00000497107 TERTO14746 1132 aaKnown RBP9.25□□□□□ -0.93
ITGA6-211ENST00000497107 SNRPBP14678 240 aaKnown RBP9.25□□□□□ -0.93
ITGA6-211ENST00000497107 ERCC6Q03468 1493 aa9.25□□□□□ -0.93
ITGA6-211ENST00000497107 GRIN2BQ13224 1484 aa9.24□□□□□ -0.93
ITGA6-211ENST00000497107 ZBTB24O43167 697 aaPredicted RBP9.24□□□□□ -0.93
ITGA6-211ENST00000497107 CD2BP2O95400 341 aaKnown RBP9.24□□□□□ -0.93
ITGA6-211ENST00000497107 CCNYL3P0C7X3 344 aa9.24□□□□□ -0.93
ITGA6-211ENST00000497107 RTL5Q5HYW3 569 aaPredicted RBP9.24□□□□□ -0.93
ITGA6-211ENST00000497107 PBRM1Q86U86 1689 aa9.23□□□□□ -0.93
ITGA6-211ENST00000497107 AQRO60306 1485 aaKnown RBP eCLIP9.23□□□□□ -0.93
ITGA6-211ENST00000497107 LYPD8Q6UX82 237 aa9.23□□□□□ -0.93
ITGA6-211ENST00000497107 CCDC24Q8N4L8 307 aa9.23□□□□□ -0.93
ITGA6-211ENST00000497107 TSC1Q92574 1164 aa9.23□□□□□ -0.93
ITGA6-211ENST00000497107 ATP13A2Q9NQ11 1180 aa9.23□□□□□ -0.93
ITGA6-211ENST00000497107 TIAM1Q13009 1591 aa9.23□□□□□ -0.93
ITGA6-211ENST00000497107 FMN1Q68DA7 1419 aa9.22□□□□□ -0.93
ITGA6-211ENST00000497107 FHOD3Q2V2M9 1422 aa9.22□□□□□ -0.93
ITGA6-211ENST00000497107 TRIM47Q96LD4 638 aa9.21□□□□□ -0.94
ITGA6-211ENST00000497107 EVA1BQ9NVM1 165 aa9.21□□□□□ -0.94
ITGA6-211ENST00000497107 CASKIN1Q8WXD9 1431 aa9.21□□□□□ -0.94
ITGA6-211ENST00000497107 RRBP1Q9P2E9 1410 aaKnown RBP9.21□□□□□ -0.94
ITGA6-211ENST00000497107 FYCO1Q9BQS8 1478 aa9.21□□□□□ -0.94
ITGA6-211ENST00000497107 SMPD1P17405 629 aa9.2□□□□□ -0.94
ITGA6-211ENST00000497107 RFC5P40937 340 aa9.2□□□□□ -0.94
ITGA6-211ENST00000497107 ADAMTS12P58397 1594 aa9.2□□□□□ -0.94
ITGA6-211ENST00000497107 KCNH2Q12809 1159 aa9.19□□□□□ -0.94
ITGA6-211ENST00000497107 TMEM259Q4ZIN3 620 aa9.19□□□□□ -0.94
ITGA6-211ENST00000497107 LRRC9Q6ZRR7 1453 aa9.19□□□□□ -0.94
ITGA6-211ENST00000497107 PCF11O94913 1555 aaKnown RBP9.19□□□□□ -0.94
ITGA6-211ENST00000497107 SAMD9Q5K651 1589 aa9.19□□□□□ -0.94
ITGA6-211ENST00000497107 TTC24A2A3L6 582 aaPredicted RBP9.18□□□□□ -0.94
ITGA6-211ENST00000497107 CFAP43Q8NDM7 1665 aa9.18□□□□□ -0.94
ITGA6-211ENST00000497107 CCNB3Q8WWL7 1395 aa9.18□□□□□ -0.94
ITGA6-211ENST00000497107 THOC2Q8NI27 1593 aaKnown RBP9.17□□□□□ -0.94
ITGA6-211ENST00000497107 ZNF608Q9ULD9 1512 aaPredicted RBP9.17□□□□□ -0.94
ITGA6-211ENST00000497107 LORP23490 312 aaPredicted RBP9.17□□□□□ -0.94
ITGA6-211ENST00000497107 CTHP32929 405 aa9.17□□□□□ -0.94
ITGA6-211ENST00000497107 TRIM32Q13049 653 aa9.17□□□□□ -0.94
ITGA6-211ENST00000497107 FBXO31Q5XUX0 539 aaPredicted RBP9.17□□□□□ -0.94
ITGA6-211ENST00000497107 WNT7AO00755 349 aa9.16□□□□□ -0.94
ITGA6-211ENST00000497107 PER1O15534 1290 aaPredicted RBP9.16□□□□□ -0.94
ITGA6-211ENST00000497107 AP1G2O75843 785 aa9.16□□□□□ -0.94
ITGA6-211ENST00000497107 F12P00748 615 aaPredicted RBP9.16□□□□□ -0.94
ITGA6-211ENST00000497107 CTDSPL2Q05D32 466 aa9.16□□□□□ -0.94
ITGA6-211ENST00000497107 SENP2Q9HC62 589 aa9.16□□□□□ -0.94
ITGA6-211ENST00000497107 IQGAP2Q13576 1575 aa9.16□□□□□ -0.94
ITGA6-211ENST00000497107 SNIP1Q8TAD8 396 aaKnown RBP9.15□□□□□ -0.94
ITGA6-211ENST00000497107 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
ITGA6-211ENST00000497107 PTCRAQ6ISU1 281 aaPredicted RBP9.14□□□□□ -0.95
ITGA6-211ENST00000497107 ARMC2Q8NEN0 867 aa9.14□□□□□ -0.95
ITGA6-211ENST00000497107 EIF4G3O43432 1585 aaKnown RBP9.14□□□□□ -0.95
ITGA6-211ENST00000497107 SNAPC4Q5SXM2 1469 aa9.14□□□□□ -0.95
ITGA6-211ENST00000497107 J3QL48 77 aa9.13□□□□□ -0.95
ITGA6-211ENST00000497107 USP17L8P0C7I0 530 aa9.13□□□□□ -0.95
ITGA6-211ENST00000497107 WNT7BP56706 349 aa9.13□□□□□ -0.95
ITGA6-211ENST00000497107 BANK1Q8NDB2 785 aa9.13□□□□□ -0.95
ITGA6-211ENST00000497107 MAP10Q9P2G4 905 aa9.13□□□□□ -0.95
ITGA6-211ENST00000497107 MAGI1Q96QZ7 1491 aaPredicted RBP9.13□□□□□ -0.95
ITGA6-211ENST00000497107 CLSPNQ9HAW4 1339 aa9.12□□□□□ -0.95
ITGA6-211ENST00000497107 KIAA0586Q9BVV6 1533 aa9.12□□□□□ -0.95
ITGA6-211ENST00000497107 MTUS2Q5JR59 1369 aa9.12□□□□□ -0.95
ITGA6-211ENST00000497107 UGGT2Q9NYU1 1516 aa9.11□□□□□ -0.95
ITGA6-211ENST00000497107 GRIN2AQ12879 1464 aa9.11□□□□□ -0.95
ITGA6-211ENST00000497107 CHMP7Q8WUX9 453 aaPredicted RBP9.11□□□□□ -0.95
ITGA6-211ENST00000497107 KIFC2Q96AC6 838 aa9.11□□□□□ -0.95
ITGA6-211ENST00000497107 PHLDB1Q86UU1 1377 aa9.11□□□□□ -0.95
ITGA6-211ENST00000497107 CCDC18Q5T9S5 1454 aa9.1□□□□□ -0.95
ITGA6-211ENST00000497107 FAM181BA6NEQ2 426 aa9.1□□□□□ -0.95
ITGA6-211ENST00000497107 C14orf37Q86TY3 774 aa9.1□□□□□ -0.95
ITGA6-211ENST00000497107 PNMA1Q8ND90 353 aa9.1□□□□□ -0.95
ITGA6-211ENST00000497107 LRRN4Q8WUT4 740 aa9.1□□□□□ -0.95
ITGA6-211ENST00000497107 HPS1Q92902 700 aa9.1□□□□□ -0.95
ITGA6-211ENST00000497107 MRGPRX2Q96LB1 330 aa9.1□□□□□ -0.95
ITGA6-211ENST00000497107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.1□□□□□ -0.95
ITGA6-211ENST00000497107 SOCS7O14512 581 aa9.09□□□□□ -0.95
ITGA6-211ENST00000497107 ITGAEP38570 1179 aa9.09□□□□□ -0.95
ITGA6-211ENST00000497107 FAM50AQ14320 339 aaKnown RBP9.09□□□□□ -0.95
ITGA6-211ENST00000497107 NBPF14Q5TI25 921 aa9.09□□□□□ -0.95
ITGA6-211ENST00000497107 SYNJ2O15056 1496 aa9.08□□□□□ -0.96
ITGA6-211ENST00000497107 APBB1O00213 710 aa9.08□□□□□ -0.96
ITGA6-211ENST00000497107 GMPRP36959 345 aa9.08□□□□□ -0.96
ITGA6-211ENST00000497107 ZNF511Q8NB15 262 aa9.08□□□□□ -0.96
ITGA6-211ENST00000497107 BAP1Q92560 729 aa9.08□□□□□ -0.96
ITGA6-211ENST00000497107 GPKOWQ92917 476 aaPredicted RBP eCLIP9.08□□□□□ -0.96
ITGA6-211ENST00000497107 ARXQ96QS3 562 aa9.08□□□□□ -0.96
ITGA6-211ENST00000497107 HECW1Q76N89 1606 aa9.08□□□□□ -0.96
ITGA6-211ENST00000497107 ZC3H4Q9UPT8 1303 aaKnown RBP9.07□□□□□ -0.96
ITGA6-211ENST00000497107 ZSCAN1Q8NBB4 408 aa9.07□□□□□ -0.96
ITGA6-211ENST00000497107 DHX57Q6P158 1386 aaKnown RBP9.07□□□□□ -0.96
ITGA6-211ENST00000497107 EHBP1L1Q8N3D4 1523 aa9.06□□□□□ -0.96
ITGA6-211ENST00000497107 SH3BP2P78314 561 aa9.06□□□□□ -0.96
ITGA6-211ENST00000497107 SKOR1P84550 965 aa9.06□□□□□ -0.96
ITGA6-211ENST00000497107 LINC01559Q495D7 138 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms