RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 C9orf131Q5VYM1 1079 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 SDE2Q6IQ49 451 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 DEPDC4Q8N2C3 294 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 PHTF2Q8N3S3 785 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 FAM200AQ8TCP9 573 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 SLC39A7Q92504 469 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 ZNF592Q92610 1267 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 GMLQ99445 158 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 ADAM33Q9BZ11 813 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 TANGO6Q9C0B7 1094 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 SLC52A1Q9NWF4 448 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 CXXC1Q9P0U4 656 aaPredicted RBP2.76□□□□□ -1.97
UBR4-217ENST00000497018 MKRN1Q9UHC7 482 aaKnown RBP2.76□□□□□ -1.97
UBR4-217ENST00000497018 TMA7Q9Y2S6 64 aaKnown RBP2.76□□□□□ -1.97
UBR4-217ENST00000497018 RIPOR2Q9Y4F9 1068 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 TOP2BQ02880 1626 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 SBNO2Q9Y2G9 1366 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 MED1Q15648 1581 aaPredicted RBP2.75□□□□□ -1.97
UBR4-217ENST00000497018 PLEKHD1A6NEE1 506 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 ATP5J2-PTCD1G3V325 749 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 RIMBP2O15034 1052 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 IGHA2P01877 340 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 P4HBP07237 508 aaKnown RBP2.75□□□□□ -1.97
UBR4-217ENST00000497018 MAPK1P28482 360 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 SLC4A3P48751 1232 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 CLDN10P78369 228 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 FANCCQ00597 558 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 FMR1Q06787 632 aaKnown RBP eCLIP2.75□□□□□ -1.971e-9■■■□□ 16.8
UBR4-217ENST00000497018 DPYDQ12882 1025 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 NCOA4Q13772 614 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 CCDC144BQ3MJ40 725 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 EAPPQ56P03 285 aaPredicted RBP2.75□□□□□ -1.97
UBR4-217ENST00000497018 NOL8Q76FK4 1167 aaKnown RBP2.75□□□□□ -1.97
UBR4-217ENST00000497018 JAZF1Q86VZ6 243 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 NT5DC4Q86YG4 428 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 DHX38Q92620 1227 aaKnown RBP2.75□□□□□ -1.97
UBR4-217ENST00000497018 KCNB2Q92953 911 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 ZDHHC16Q969W1 377 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 BRINP2Q9C0B6 783 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 TGIF2Q9GZN2 237 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.75□□□□□ -1.97
UBR4-217ENST00000497018 KLHL42Q9P2K6 505 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 TSKSQ9UJT2 592 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.75□□□□□ -1.97
UBR4-217ENST00000497018 KIAA1024Q9UPX6 916 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 PPME1Q9Y570 386 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 PDS5BQ9NTI5 1447 aa2.75□□□□□ -1.97
UBR4-217ENST00000497018 LOC102724159A0A0B4J2E5 919 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 PSDA5PKW4 1024 aaPredicted RBP2.74□□□□□ -1.97
UBR4-217ENST00000497018 ZBBXA8MT70 800 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 SLC10A3P09131 477 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 COL9A1P20849 921 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 RASA1P20936 1047 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 RBL2Q08999 1139 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 TCEAL1Q15170 157 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 PWP2Q15269 919 aaKnown RBP2.74□□□□□ -1.97
UBR4-217ENST00000497018 LARP1Q6PKG0 1096 aaKnown RBP2.74□□□□□ -1.97
UBR4-217ENST00000497018 TMED8Q6PL24 325 aaPredicted RBP2.74□□□□□ -1.97
UBR4-217ENST00000497018 TRAF7Q6Q0C0 670 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 GLYCTKQ8IVS8 523 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 SIX5Q8N196 739 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 SPACA7Q96KW9 195 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 KCNH8Q96L42 1107 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 RBCK1Q9BYM8 510 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 ANO2Q9NQ90 1003 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 METTL5Q9NRN9 209 aaKnown RBP2.74□□□□□ -1.97
UBR4-217ENST00000497018 NLRP2Q9NX02 1062 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 PRKAG2Q9UGJ0 569 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 PCDHGA4Q9Y5G9 962 aa2.74□□□□□ -1.97
UBR4-217ENST00000497018 DNMT3AQ9Y6K1 912 aaPredicted RBP2.74□□□□□ -1.97
UBR4-217ENST00000497018 TSPOAP1O95153 1857 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 ARID4BQ4LE39 1312 aaPredicted RBP2.73□□□□□ -1.97
UBR4-217ENST00000497018 SCRIBQ14160 1630 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 NBPF26B4DH59 902 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 TREHO43280 583 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 PRMT3O60678 531 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 NPR3P17342 541 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 KCNH2Q12809 1159 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 PTPROQ16827 1216 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 ZNF746Q6NUN9 644 aaPredicted RBP2.73□□□□□ -1.97
UBR4-217ENST00000497018 NUDT18Q6ZVK8 323 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 TMC7Q7Z402 723 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 ZSCAN29Q8IWY8 852 aaPredicted RBP2.73□□□□□ -1.97
UBR4-217ENST00000497018 OGFOD1Q8N543 542 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 ZNF454Q8N9F8 522 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 PNMA1Q8ND90 353 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 RNF19AQ9NV58 838 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 PCDH10Q9P2E7 1040 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 SEPT3Q9UH03 358 aa2.73□□□□□ -1.97
UBR4-217ENST00000497018 ZBTB7BO15156 539 aaPredicted RBP2.72□□□□□ -1.97
UBR4-217ENST00000497018 ABL1P00519 1130 aa2.72□□□□□ -1.97
UBR4-217ENST00000497018 F12P00748 615 aaPredicted RBP2.72□□□□□ -1.97
UBR4-217ENST00000497018 HDGFP51858 240 aaKnown RBP2.72□□□□□ -1.97
UBR4-217ENST00000497018 SF3B2Q13435 895 aaKnown RBP2.72□□□□□ -1.97
UBR4-217ENST00000497018 MTMR3Q13615 1198 aa2.72□□□□□ -1.97
UBR4-217ENST00000497018 DSC3Q14574 896 aa2.72□□□□□ -1.97
UBR4-217ENST00000497018 DOK7Q18PE1 504 aa2.72□□□□□ -1.97
UBR4-217ENST00000497018 DESI1Q6ICB0 168 aa2.72□□□□□ -1.97
UBR4-217ENST00000497018 TMC4Q7Z404 712 aa2.72□□□□□ -1.97
UBR4-217ENST00000497018 PACS2Q86VP3 889 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms