RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 SBF2Q86WG5 1849 aa14.43□□□□□ -0.1
SRSF4-205ENST00000497015 C11orf95C9JLR9 678 aaPredicted RBP14.43□□□□□ -0.1
SRSF4-205ENST00000497015 ABTB2Q8N961 1025 aa14.43□□□□□ -0.1
SRSF4-205ENST00000497015 CDK19Q9BWU1 502 aa14.43□□□□□ -0.1
SRSF4-205ENST00000497015 EIF3AQ14152 1382 aaKnown RBP14.43□□□□□ -0.1
SRSF4-205ENST00000497015 COL5A2P05997 1499 aaPredicted RBP14.43□□□□□ -0.1
SRSF4-205ENST00000497015 OVOS2A0A0G2JMS6 1433 aa14.42□□□□□ -0.1
SRSF4-205ENST00000497015 OVOS2A0A0J9YW53 1432 aa14.42□□□□□ -0.1
SRSF4-205ENST00000497015 OVOS2Q6IE36 1432 aa14.42□□□□□ -0.1
SRSF4-205ENST00000497015 PLEKHG3A1L390 1219 aa14.42□□□□□ -0.1
SRSF4-205ENST00000497015 DDB1Q16531 1140 aa14.41□□□□□ -0.1
SRSF4-205ENST00000497015 MTFR1LQ9H019 292 aa14.41□□□□□ -0.1
SRSF4-205ENST00000497015 AXIN2Q9Y2T1 843 aa14.41□□□□□ -0.1
SRSF4-205ENST00000497015 CRB1P82279 1406 aa14.41□□□□□ -0.1
SRSF4-205ENST00000497015 RGPD3A6NKT7 1758 aaPredicted RBP14.4□□□□□ -0.1
SRSF4-205ENST00000497015 RGPD4Q7Z3J3 1758 aa14.4□□□□□ -0.1
SRSF4-205ENST00000497015 HOXD11P31277 338 aaPredicted RBP14.4□□□□□ -0.1
SRSF4-205ENST00000497015 ARXQ96QS3 562 aa14.4□□□□□ -0.1
SRSF4-205ENST00000497015 KDM2AQ9Y2K7 1162 aa14.4□□□□□ -0.1
SRSF4-205ENST00000497015 STK32BQ9NY57 414 aa14.39□□□□□ -0.11
SRSF4-205ENST00000497015 CCDC61Q9Y6R9 512 aa14.39□□□□□ -0.11
SRSF4-205ENST00000497015 CHD4Q14839 1912 aa14.39□□□□□ -0.11
SRSF4-205ENST00000497015 BCL9O00512 1426 aa14.38□□□□□ -0.11
SRSF4-205ENST00000497015 GIGYF1O75420 1035 aaPredicted RBP14.37□□□□□ -0.11
SRSF4-205ENST00000497015 NLRP13Q86W25 1043 aa14.37□□□□□ -0.11
SRSF4-205ENST00000497015 LRRC37A3O60309 1634 aa14.37□□□□□ -0.11
SRSF4-205ENST00000497015 AATKQ6ZMQ8 1374 aa14.35□□□□□ -0.11
SRSF4-205ENST00000497015 MAP3K5Q99683 1374 aa14.35□□□□□ -0.11
SRSF4-205ENST00000497015 GOLGB1Q14789 3259 aaKnown RBP14.35□□□□□ -0.11
SRSF4-205ENST00000497015 ZBTB7CA1YPR0 619 aa14.35□□□□□ -0.11
SRSF4-205ENST00000497015 GPR162Q16538 588 aa14.35□□□□□ -0.11
SRSF4-205ENST00000497015 TOM1L2Q6ZVM7 507 aa14.35□□□□□ -0.11
SRSF4-205ENST00000497015 DCAF11Q8TEB1 546 aa14.35□□□□□ -0.11
SRSF4-205ENST00000497015 RAB3GAP2Q9H2M9 1393 aa14.34□□□□□ -0.11
SRSF4-205ENST00000497015 ZNF827Q17R98 1081 aa14.34□□□□□ -0.11
SRSF4-205ENST00000497015 PLCB2Q00722 1185 aa14.33□□□□□ -0.12
SRSF4-205ENST00000497015 LRRC4BQ9NT99 713 aa14.33□□□□□ -0.12
SRSF4-205ENST00000497015 WDR17Q8IZU2 1322 aa14.32□□□□□ -0.12
SRSF4-205ENST00000497015 COL18A1P39060 1754 aa14.32□□□□□ -0.12
SRSF4-205ENST00000497015 TOPAZ1Q8N9V7 1692 aa14.31□□□□□ -0.12
SRSF4-205ENST00000497015 NLGN2Q8NFZ4 835 aa14.31□□□□□ -0.12
SRSF4-205ENST00000497015 ITSN1Q15811 1721 aa14.31□□□□□ -0.12
SRSF4-205ENST00000497015 SHANK3Q9BYB0 1731 aa14.31□□□□□ -0.12
SRSF4-205ENST00000497015 NLRP6P59044 892 aa14.3□□□□□ -0.12
SRSF4-205ENST00000497015 ACSBG1Q96GR2 724 aa14.3□□□□□ -0.12
SRSF4-205ENST00000497015 EXOC5O00471 708 aa14.29□□□□□ -0.12
SRSF4-205ENST00000497015 YBX3P16989 372 aaKnown RBP eCLIP14.29□□□□□ -0.12
SRSF4-205ENST00000497015 ARHGEF25Q86VW2 580 aa14.29□□□□□ -0.12
SRSF4-205ENST00000497015 CARD10Q9BWT7 1032 aa14.29□□□□□ -0.12
SRSF4-205ENST00000497015 ARHGEF28Q8N1W1 1705 aaKnown RBP14.29□□□□□ -0.12
SRSF4-205ENST00000497015 AKT1S1Q96B36 256 aa14.28□□□□□ -0.12
SRSF4-205ENST00000497015 CDCA7Q9BWT1 371 aaPredicted RBP14.28□□□□□ -0.12
SRSF4-205ENST00000497015 CABP2Q9NPB3 220 aa14.28□□□□□ -0.12
SRSF4-205ENST00000497015 PAPPAQ13219 1627 aa14.27□□□□□ -0.12
SRSF4-205ENST00000497015 SLIT3O75094 1523 aa14.27□□□□□ -0.12
SRSF4-205ENST00000497015 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
SRSF4-205ENST00000497015 CABP1Q9NZU7 370 aa14.27□□□□□ -0.13
SRSF4-205ENST00000497015 PPIP5K1Q6PFW1 1433 aa14.26□□□□□ -0.13
SRSF4-205ENST00000497015 NBPF1Q3BBV0 1214 aa14.25□□□□□ -0.13
SRSF4-205ENST00000497015 KLHL34Q8N239 644 aa14.25□□□□□ -0.13
SRSF4-205ENST00000497015 KCNQ4P56696 695 aa14.24□□□□□ -0.13
SRSF4-205ENST00000497015 WNK3Q9BYP7 1800 aa14.24□□□□□ -0.13
SRSF4-205ENST00000497015 USP6P35125 1406 aa14.24□□□□□ -0.13
SRSF4-205ENST00000497015 PNPLA7Q6ZV29 1317 aa14.23□□□□□ -0.13
SRSF4-205ENST00000497015 TRIM26Q12899 539 aaPredicted RBP14.23□□□□□ -0.13
SRSF4-205ENST00000497015 SLC16A10Q8TF71 515 aa14.23□□□□□ -0.13
SRSF4-205ENST00000497015 STAC3Q96MF2 364 aa14.23□□□□□ -0.13
SRSF4-205ENST00000497015 AKAP12Q02952 1782 aa14.22□□□□□ -0.13
SRSF4-205ENST00000497015 SRPK2P78362 688 aaKnown RBP14.22□□□□□ -0.13
SRSF4-205ENST00000497015 RGPD5Q99666 1765 aa14.22□□□□□ -0.13
SRSF4-205ENST00000497015 BRD4O60885 1362 aaPredicted RBP14.22□□□□□ -0.13
SRSF4-205ENST00000497015 CSB-PGBD3P0DP91 1061 aa14.21□□□□□ -0.13
SRSF4-205ENST00000497015 HSPA6P17066 643 aa14.21□□□□□ -0.13
SRSF4-205ENST00000497015 CPSF1Q10570 1443 aaKnown RBP14.21□□□□□ -0.13
SRSF4-205ENST00000497015 COL24A1Q17RW2 1714 aa14.21□□□□□ -0.14
SRSF4-205ENST00000497015 SOX12O15370 315 aa14.2□□□□□ -0.14
SRSF4-205ENST00000497015 ATP10DQ9P241 1426 aa14.2□□□□□ -0.14
SRSF4-205ENST00000497015 NHSQ6T4R5 1651 aa14.2□□□□□ -0.14
SRSF4-205ENST00000497015 TNS2Q63HR2 1409 aa14.19□□□□□ -0.14
SRSF4-205ENST00000497015 PIK3C2AO00443 1686 aa14.18□□□□□ -0.14
SRSF4-205ENST00000497015 GRIN3BO60391 1043 aa14.18□□□□□ -0.14
SRSF4-205ENST00000497015 POLD1P28340 1107 aa14.18□□□□□ -0.14
SRSF4-205ENST00000497015 TTC21BQ7Z4L5 1316 aa14.17□□□□□ -0.14
SRSF4-205ENST00000497015 TRPM1Q7Z4N2 1603 aa14.17□□□□□ -0.14
SRSF4-205ENST00000497015 CCDC7Q96M83 1385 aa14.17□□□□□ -0.14
SRSF4-205ENST00000497015 DNAJC5GQ8N7S2 189 aa14.16□□□□□ -0.14
SRSF4-205ENST00000497015 KCNH5Q8NCM2 988 aa14.16□□□□□ -0.14
SRSF4-205ENST00000497015 GPBP1L1Q9HC44 474 aaPredicted RBP14.16□□□□□ -0.14
SRSF4-205ENST00000497015 BTAF1O14981 1849 aa14.15□□□□□ -0.14
SRSF4-205ENST00000497015 COL23A1Q86Y22 540 aaPredicted RBP14.15□□□□□ -0.14
SRSF4-205ENST00000497015 ZNF526Q8TF50 670 aaPredicted RBP14.15□□□□□ -0.14
SRSF4-205ENST00000497015 TFCP2L1Q9NZI6 479 aa14.15□□□□□ -0.14
SRSF4-205ENST00000497015 ADCY9O60503 1353 aa14.14□□□□□ -0.15
SRSF4-205ENST00000497015 IL2RBP14784 551 aa14.14□□□□□ -0.15
SRSF4-205ENST00000497015 SLC27A3Q5K4L6 730 aa14.14□□□□□ -0.15
SRSF4-205ENST00000497015 NFAT5O94916 1531 aa14.14□□□□□ -0.15
SRSF4-205ENST00000497015 CENPJQ9HC77 1338 aaPredicted RBP14.14□□□□□ -0.15
SRSF4-205ENST00000497015 KIF3CO14782 793 aa14.13□□□□□ -0.15
SRSF4-205ENST00000497015 NLRP2Q9NX02 1062 aa14.13□□□□□ -0.15
SRSF4-205ENST00000497015 ABCC6O95255 1503 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms