RNA–Protein interactions for RNA: ENST00000496269.1

PCOLCE-210, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 995 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-210ENST00000496269 WNK3Q9BYP7 1800 aa30.87■■■□□ 2.53
PCOLCE-210ENST00000496269 AXIN2Q9Y2T1 843 aa30.86■■■□□ 2.53
PCOLCE-210ENST00000496269 CRB1P82279 1406 aa30.82■■■□□ 2.52
PCOLCE-210ENST00000496269 PARP4Q9UKK3 1724 aaKnown RBP30.82■■■□□ 2.52
PCOLCE-210ENST00000496269 SOX12O15370 315 aa30.82■■■□□ 2.52
PCOLCE-210ENST00000496269 ZBTB7CA1YPR0 619 aa30.81■■■□□ 2.52
PCOLCE-210ENST00000496269 EVA1CP58658 441 aa30.8■■■□□ 2.52
PCOLCE-210ENST00000496269 BARGINQ6ZT62 677 aa30.79■■■□□ 2.52
PCOLCE-210ENST00000496269 KRT27Q7Z3Y8 459 aa30.78■■■□□ 2.52
PCOLCE-210ENST00000496269 CARD14Q9BXL6 1004 aa30.78■■■□□ 2.52
PCOLCE-210ENST00000496269 WDR17Q8IZU2 1322 aa30.76■■■□□ 2.52
PCOLCE-210ENST00000496269 FYB1O15117 783 aa30.75■■■□□ 2.51
PCOLCE-210ENST00000496269 TCP11L2Q8N4U5 519 aa30.75■■■□□ 2.51
PCOLCE-210ENST00000496269 LRRC37A3O60309 1634 aa30.75■■■□□ 2.51
PCOLCE-210ENST00000496269 USP35Q9P2H5 1018 aa30.74■■■□□ 2.51
PCOLCE-210ENST00000496269 THRAP3Q9Y2W1 955 aaKnown RBP30.74■■■□□ 2.51
PCOLCE-210ENST00000496269 NSD3Q9BZ95 1437 aa30.73■■■□□ 2.51
PCOLCE-210ENST00000496269 C11orf95C9JLR9 678 aaPredicted RBP30.73■■■□□ 2.51
PCOLCE-210ENST00000496269 A0A0G2JS52 829 aa30.71■■■□□ 2.51
PCOLCE-210ENST00000496269 MYT1Q01538 1121 aa30.71■■■□□ 2.51
PCOLCE-210ENST00000496269 COG3Q96JB2 828 aa30.71■■■□□ 2.51
PCOLCE-210ENST00000496269 BLMP54132 1417 aaPredicted RBP30.7■■■□□ 2.5
PCOLCE-210ENST00000496269 DISP2A7MBM2 1401 aa30.69■■■□□ 2.5
PCOLCE-210ENST00000496269 ANKRD26Q9UPS8 1709 aa30.69■■■□□ 2.5
PCOLCE-210ENST00000496269 TNS1Q9HBL0 1735 aaKnown RBP30.68■■■□□ 2.5
PCOLCE-210ENST00000496269 GGNBP2Q9H3C7 697 aa30.68■■■□□ 2.5
PCOLCE-210ENST00000496269 ERBB3P21860 1342 aa30.68■■■□□ 2.5
PCOLCE-210ENST00000496269 FAM208AQ9UK61 1670 aaKnown RBP30.68■■■□□ 2.5
PCOLCE-210ENST00000496269 RGPD1P0DJD0 1748 aa30.67■■■□□ 2.5
PCOLCE-210ENST00000496269 PEAK1Q9H792 1746 aa30.67■■■□□ 2.5
PCOLCE-210ENST00000496269 FBLN1P23142 703 aa30.66■■■□□ 2.5
PCOLCE-210ENST00000496269 TOM1L2Q6ZVM7 507 aa30.66■■■□□ 2.5
PCOLCE-210ENST00000496269 CCDC125Q86Z20 511 aa30.66■■■□□ 2.5
PCOLCE-210ENST00000496269 MAP3K19Q56UN5 1328 aa30.66■■■□□ 2.5
PCOLCE-210ENST00000496269 CARD10Q9BWT7 1032 aa30.65■■■□□ 2.5
PCOLCE-210ENST00000496269 FAM182BQ5T319 152 aa30.64■■■□□ 2.5
PCOLCE-210ENST00000496269 IP6K1Q92551 441 aa30.63■■■□□ 2.49
PCOLCE-210ENST00000496269 RGPD2P0DJD1 1756 aa30.61■■■□□ 2.49
PCOLCE-210ENST00000496269 RTL1A6NKG5 1358 aa30.6■■■□□ 2.49
PCOLCE-210ENST00000496269 CCDC7Q96M83 1385 aa30.6■■■□□ 2.49
PCOLCE-210ENST00000496269 POLR3GLQ9BT43 218 aa30.6■■■□□ 2.49
PCOLCE-210ENST00000496269 CSB-PGBD3P0DP91 1061 aa30.58■■■□□ 2.49
PCOLCE-210ENST00000496269 HOXC9P31274 260 aa30.58■■■□□ 2.49
PCOLCE-210ENST00000496269 ANKRD24Q8TF21 1146 aa30.58■■■□□ 2.49
PCOLCE-210ENST00000496269 SBF2Q86WG5 1849 aa30.57■■■□□ 2.48
PCOLCE-210ENST00000496269 KIF7Q2M1P5 1343 aa30.57■■■□□ 2.48
PCOLCE-210ENST00000496269 RRS1Q15050 365 aaKnown RBP30.55■■■□□ 2.48
PCOLCE-210ENST00000496269 CGNL1Q0VF96 1302 aa30.54■■■□□ 2.48
PCOLCE-210ENST00000496269 PANK3Q9H999 370 aa30.54■■■□□ 2.48
PCOLCE-210ENST00000496269 MAP2P11137 1827 aaKnown RBP30.54■■■□□ 2.48
PCOLCE-210ENST00000496269 PDE3BQ13370 1112 aa30.52■■■□□ 2.48
PCOLCE-210ENST00000496269 CDCA7Q9BWT1 371 aaPredicted RBP30.52■■■□□ 2.48
PCOLCE-210ENST00000496269 TNS2Q63HR2 1409 aa30.51■■■□□ 2.47
PCOLCE-210ENST00000496269 FAM196AQ6ZSG2 479 aa30.51■■■□□ 2.47
PCOLCE-210ENST00000496269 DEFB132Q7Z7B7 95 aa30.51■■■□□ 2.47
PCOLCE-210ENST00000496269 KIF24Q5T7B8 1368 aa30.51■■■□□ 2.47
PCOLCE-210ENST00000496269 NLRP2Q9NX02 1062 aa30.5■■■□□ 2.47
PCOLCE-210ENST00000496269 OVOS2A0A0G2JMS6 1433 aa30.49■■■□□ 2.47
PCOLCE-210ENST00000496269 AMPHP49418 695 aa30.49■■■□□ 2.47
PCOLCE-210ENST00000496269 DDB1Q16531 1140 aa30.49■■■□□ 2.47
PCOLCE-210ENST00000496269 BCL9O00512 1426 aa30.47■■■□□ 2.47
PCOLCE-210ENST00000496269 FLT4P35916 1363 aa30.47■■■□□ 2.47
PCOLCE-210ENST00000496269 SHANK3Q9BYB0 1731 aa30.47■■■□□ 2.47
PCOLCE-210ENST00000496269 INSRP06213 1382 aa30.46■■■□□ 2.47
PCOLCE-210ENST00000496269 MARCH10Q8NA82 808 aaPredicted RBP30.45■■■□□ 2.47
PCOLCE-210ENST00000496269 LTV1Q96GA3 475 aaPredicted RBP30.45■■■□□ 2.47
PCOLCE-210ENST00000496269 EMILIN1Q9Y6C2 1016 aa30.45■■■□□ 2.47
PCOLCE-210ENST00000496269 NSD2O96028 1365 aa30.44■■■□□ 2.46
PCOLCE-210ENST00000496269 TRIM37O94972 964 aa30.43■■■□□ 2.46
PCOLCE-210ENST00000496269 SF3B2Q13435 895 aaKnown RBP30.43■■■□□ 2.46
PCOLCE-210ENST00000496269 RREB1Q92766 1687 aa30.42■■■□□ 2.46
PCOLCE-210ENST00000496269 HSP90AB2PQ58FF8 381 aa30.42■■■□□ 2.46
PCOLCE-210ENST00000496269 IL2RBP14784 551 aa30.41■■■□□ 2.46
PCOLCE-210ENST00000496269 WASHC2AQ641Q2 1341 aa30.41■■■□□ 2.46
PCOLCE-210ENST00000496269 RGPD3A6NKT7 1758 aaPredicted RBP30.4■■■□□ 2.46
PCOLCE-210ENST00000496269 RGPD4Q7Z3J3 1758 aa30.4■■■□□ 2.46
PCOLCE-210ENST00000496269 NCAPD2Q15021 1401 aa30.39■■■□□ 2.46
PCOLCE-210ENST00000496269 SMG6Q86US8 1419 aaKnown RBP30.39■■■□□ 2.46
PCOLCE-210ENST00000496269 MEGF6O75095 1541 aa30.39■■■□□ 2.46
PCOLCE-210ENST00000496269 BAG6P46379 1132 aa30.39■■■□□ 2.46
PCOLCE-210ENST00000496269 EXOC5O00471 708 aa30.38■■■□□ 2.45
PCOLCE-210ENST00000496269 POLKQ9UBT6 870 aa30.38■■■□□ 2.45
PCOLCE-210ENST00000496269 NHSQ6T4R5 1651 aa30.37■■■□□ 2.45
PCOLCE-210ENST00000496269 NBPF6Q5VWK0 638 aa30.37■■■□□ 2.45
PCOLCE-210ENST00000496269 NBPF4Q96M43 638 aa30.37■■■□□ 2.45
PCOLCE-210ENST00000496269 EN1Q05925 392 aaPredicted RBP30.36■■■□□ 2.45
PCOLCE-210ENST00000496269 AMER1Q5JTC6 1135 aaPredicted RBP30.36■■■□□ 2.45
PCOLCE-210ENST00000496269 PER1O15534 1290 aaPredicted RBP30.35■■■□□ 2.45
PCOLCE-210ENST00000496269 NUP188Q5SRE5 1749 aa30.35■■■□□ 2.45
PCOLCE-210ENST00000496269 PTF1AQ7RTS3 328 aa30.33■■■□□ 2.45
PCOLCE-210ENST00000496269 CAMKK2Q96RR4 588 aa30.33■■■□□ 2.45
PCOLCE-210ENST00000496269 KNSTRNQ9Y448 316 aa30.31■■■□□ 2.44
PCOLCE-210ENST00000496269 APBA3O96018 575 aa30.3■■■□□ 2.44
PCOLCE-210ENST00000496269 USHBP1Q8N6Y0 703 aa30.3■■■□□ 2.44
PCOLCE-210ENST00000496269 PKD1L3Q7Z443 1732 aa30.3■■■□□ 2.44
PCOLCE-210ENST00000496269 PARD3Q8TEW0 1356 aa30.29■■■□□ 2.44
PCOLCE-210ENST00000496269 TNNT2P45379 298 aaPredicted RBP30.29■■■□□ 2.44
PCOLCE-210ENST00000496269 EZH2Q15910 746 aaKnown RBP30.29■■■□□ 2.44
PCOLCE-210ENST00000496269 PPM1GO15355 546 aaPredicted RBP30.26■■■□□ 2.43
PCOLCE-210ENST00000496269 DOT1LQ8TEK3 1739 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms