RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 KCNH5Q8NCM2 988 aa12.63□□□□□ -0.39
SORT1-208ENST00000495777 CDCA7Q9BWT1 371 aaPredicted RBP12.63□□□□□ -0.39
SORT1-208ENST00000495777 BCL11BQ9C0K0 894 aaPredicted RBP12.63□□□□□ -0.39
SORT1-208ENST00000495777 RGPD3A6NKT7 1758 aaPredicted RBP12.63□□□□□ -0.39
SORT1-208ENST00000495777 RGPD4Q7Z3J3 1758 aa12.63□□□□□ -0.39
SORT1-208ENST00000495777 TTC21AQ8NDW8 1320 aa12.62□□□□□ -0.39
SORT1-208ENST00000495777 TRPM1Q7Z4N2 1603 aa12.62□□□□□ -0.39
SORT1-208ENST00000495777 ZBTB7CA1YPR0 619 aa12.62□□□□□ -0.39
SORT1-208ENST00000495777 MARCH10Q8NA82 808 aaPredicted RBP12.62□□□□□ -0.39
SORT1-208ENST00000495777 NFAT5O94916 1531 aa12.62□□□□□ -0.39
SORT1-208ENST00000495777 ROCK2O75116 1388 aaKnown RBP12.61□□□□□ -0.39
SORT1-208ENST00000495777 KCNQ2O43526 872 aa12.61□□□□□ -0.39
SORT1-208ENST00000495777 PTF1AQ7RTS3 328 aa12.61□□□□□ -0.39
SORT1-208ENST00000495777 CARD10Q9BWT7 1032 aa12.61□□□□□ -0.39
SORT1-208ENST00000495777 SPON1Q9HCB6 807 aa12.61□□□□□ -0.39
SORT1-208ENST00000495777 ABCC6O95255 1503 aa12.61□□□□□ -0.39
SORT1-208ENST00000495777 SBNO2Q9Y2G9 1366 aa12.6□□□□□ -0.39
SORT1-208ENST00000495777 NINLQ9Y2I6 1382 aa12.6□□□□□ -0.39
SORT1-208ENST00000495777 PROM2Q8N271 834 aa12.6□□□□□ -0.39
SORT1-208ENST00000495777 PCGF6Q9BYE7 350 aa12.6□□□□□ -0.39
SORT1-208ENST00000495777 ANO8Q9HCE9 1232 aaPredicted RBP12.6□□□□□ -0.39
SORT1-208ENST00000495777 SIN3AQ96ST3 1273 aa12.59□□□□□ -0.39
SORT1-208ENST00000495777 USP31Q70CQ4 1352 aa12.58□□□□□ -0.4
SORT1-208ENST00000495777 CCDC7Q96M83 1385 aa12.58□□□□□ -0.4
SORT1-208ENST00000495777 WNK3Q9BYP7 1800 aa12.58□□□□□ -0.4
SORT1-208ENST00000495777 KTN1Q86UP2 1357 aaKnown RBP12.57□□□□□ -0.4
SORT1-208ENST00000495777 TNS2Q63HR2 1409 aa12.57□□□□□ -0.4
SORT1-208ENST00000495777 AKAP12Q02952 1782 aa12.57□□□□□ -0.4
SORT1-208ENST00000495777 SBF2Q86WG5 1849 aa12.57□□□□□ -0.4
SORT1-208ENST00000495777 CASZ1Q86V15 1759 aa12.56□□□□□ -0.4
SORT1-208ENST00000495777 CSB-PGBD3P0DP91 1061 aa12.56□□□□□ -0.4
SORT1-208ENST00000495777 PPP1R1BQ9UD71 204 aaPredicted RBP12.56□□□□□ -0.4
SORT1-208ENST00000495777 CD163L1Q9NR16 1453 aa12.56□□□□□ -0.4
SORT1-208ENST00000495777 EXOC5O00471 708 aa12.55□□□□□ -0.4
SORT1-208ENST00000495777 SOX12O15370 315 aa12.55□□□□□ -0.4
SORT1-208ENST00000495777 PDGFDQ9GZP0 370 aaPredicted RBP12.55□□□□□ -0.4
SORT1-208ENST00000495777 ERBB3P21860 1342 aa12.55□□□□□ -0.4
SORT1-208ENST00000495777 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
SORT1-208ENST00000495777 YY1P25490 414 aa12.54□□□□□ -0.4
SORT1-208ENST00000495777 PTGER2P43116 358 aa12.54□□□□□ -0.4
SORT1-208ENST00000495777 TXNRD1Q16881 649 aa12.54□□□□□ -0.4
SORT1-208ENST00000495777 MON2Q7Z3U7 1717 aa12.54□□□□□ -0.4
SORT1-208ENST00000495777 NEUROD1Q13562 356 aa12.53□□□□□ -0.4
SORT1-208ENST00000495777 SLC15A2Q16348 729 aa12.52□□□□□ -0.41
SORT1-208ENST00000495777 NME9Q86XW9 330 aa12.52□□□□□ -0.41
SORT1-208ENST00000495777 ZBTB7AO95365 584 aa12.51□□□□□ -0.41
SORT1-208ENST00000495777 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.51□□□□□ -0.41
SORT1-208ENST00000495777 PUS7Q96PZ0 661 aaKnown RBP12.51□□□□□ -0.41
SORT1-208ENST00000495777 STK32BQ9NY57 414 aa12.51□□□□□ -0.41
SORT1-208ENST00000495777 EDC4Q6P2E9 1401 aaKnown RBP12.51□□□□□ -0.41
SORT1-208ENST00000495777 UTRNP46939 3433 aa12.51□□□□□ -0.41
SORT1-208ENST00000495777 IL2RBP14784 551 aa12.5□□□□□ -0.41
SORT1-208ENST00000495777 SGIP1Q9BQI5 828 aa12.5□□□□□ -0.41
SORT1-208ENST00000495777 CARD11Q9BXL7 1154 aa12.5□□□□□ -0.41
SORT1-208ENST00000495777 NHSQ6T4R5 1651 aa12.5□□□□□ -0.41
SORT1-208ENST00000495777 RGPD5Q99666 1765 aa12.5□□□□□ -0.41
SORT1-208ENST00000495777 DCAF8L1A6NGE4 600 aa12.49□□□□□ -0.41
SORT1-208ENST00000495777 ANKRD24Q8TF21 1146 aa12.49□□□□□ -0.41
SORT1-208ENST00000495777 MTFR1LQ9H019 292 aa12.49□□□□□ -0.41
SORT1-208ENST00000495777 SLC12A5Q9H2X9 1139 aa12.49□□□□□ -0.41
SORT1-208ENST00000495777 NLRP2Q9NX02 1062 aa12.49□□□□□ -0.41
SORT1-208ENST00000495777 MYOM1P52179 1685 aa12.48□□□□□ -0.41
SORT1-208ENST00000495777 PAPPAQ13219 1627 aa12.48□□□□□ -0.41
SORT1-208ENST00000495777 A0A1W2PP64 1363 aa12.48□□□□□ -0.41
SORT1-208ENST00000495777 HDGFL2Q7Z4V5 671 aaPredicted RBP12.48□□□□□ -0.41
SORT1-208ENST00000495777 TMC1Q8TDI8 760 aa12.47□□□□□ -0.41
SORT1-208ENST00000495777 ACSBG1Q96GR2 724 aa12.47□□□□□ -0.41
SORT1-208ENST00000495777 TERF2IPQ9NYB0 399 aa12.47□□□□□ -0.41
SORT1-208ENST00000495777 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
SORT1-208ENST00000495777 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.41
SORT1-208ENST00000495777 IP6K1Q92551 441 aa12.46□□□□□ -0.41
SORT1-208ENST00000495777 SYT17Q9BSW7 474 aa12.46□□□□□ -0.41
SORT1-208ENST00000495777 MAP3K5Q99683 1374 aa12.45□□□□□ -0.42
SORT1-208ENST00000495777 TESK2Q96S53 571 aa12.45□□□□□ -0.42
SORT1-208ENST00000495777 FHDC1Q9C0D6 1143 aaPredicted RBP12.45□□□□□ -0.42
SORT1-208ENST00000495777 ZNF827Q17R98 1081 aa12.44□□□□□ -0.42
SORT1-208ENST00000495777 LRRC4BQ9NT99 713 aa12.44□□□□□ -0.42
SORT1-208ENST00000495777 LTN1O94822 1766 aa12.43□□□□□ -0.42
SORT1-208ENST00000495777 AKT1S1Q96B36 256 aa12.43□□□□□ -0.42
SORT1-208ENST00000495777 SLC27A3Q5K4L6 730 aa12.42□□□□□ -0.42
SORT1-208ENST00000495777 ARXQ96QS3 562 aa12.42□□□□□ -0.42
SORT1-208ENST00000495777 TONSLQ96HA7 1378 aa12.42□□□□□ -0.42
SORT1-208ENST00000495777 BTAF1O14981 1849 aa12.41□□□□□ -0.42
SORT1-208ENST00000495777 MAP3K19Q56UN5 1328 aa12.41□□□□□ -0.42
SORT1-208ENST00000495777 NSD2O96028 1365 aa12.41□□□□□ -0.42
SORT1-208ENST00000495777 ANKRD36BQ8N2N9 1353 aa12.41□□□□□ -0.42
SORT1-208ENST00000495777 SLC24A1O60721 1099 aa12.4□□□□□ -0.42
SORT1-208ENST00000495777 HOXC9P31274 260 aa12.4□□□□□ -0.42
SORT1-208ENST00000495777 ZNF784Q8NCA9 323 aaPredicted RBP12.4□□□□□ -0.42
SORT1-208ENST00000495777 SLC16A10Q8TF71 515 aa12.4□□□□□ -0.42
SORT1-208ENST00000495777 FAM208AQ9UK61 1670 aaKnown RBP12.4□□□□□ -0.42
SORT1-208ENST00000495777 ST20-MTHFSA0A0A6YYL1 179 aa12.39□□□□□ -0.43
SORT1-208ENST00000495777 DDX54Q8TDD1 881 aaKnown RBP12.39□□□□□ -0.43
SORT1-208ENST00000495777 COG3Q96JB2 828 aa12.39□□□□□ -0.43
SORT1-208ENST00000495777 RTL1A6NKG5 1358 aa12.39□□□□□ -0.43
SORT1-208ENST00000495777 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
SORT1-208ENST00000495777 MEGF6O75095 1541 aa12.38□□□□□ -0.43
SORT1-208ENST00000495777 LTV1Q96GA3 475 aaPredicted RBP12.38□□□□□ -0.43
SORT1-208ENST00000495777 PRIM1P49642 420 aaKnown RBP12.37□□□□□ -0.43
SORT1-208ENST00000495777 FBLN1P23142 703 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms