RNA–Protein interactions for RNA: ENST00000495517.5

RBM41-208, Transcript of RNA binding motif protein 41, human

TSL 2

Gene RBM41, Length 3,315 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM41-208	ENST00000495517	ZNF521	Q96K83	1311 aa		9.35	□□□□□ -0.91
RBM41-208	ENST00000495517	TNS3	Q68CZ2	1445 aa		9.35	□□□□□ -0.91
RBM41-208	ENST00000495517	UBR2	Q8IWV8	1755 aa		9.35	□□□□□ -0.91
RBM41-208	ENST00000495517	ARHGEF10	O15013	1369 aa		9.35	□□□□□ -0.91
RBM41-208	ENST00000495517	MRC1	P22897	1456 aa		9.35	□□□□□ -0.91
RBM41-208	ENST00000495517	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	9.34	□□□□□ -0.91
RBM41-208	ENST00000495517	C19orf44	Q9H6X5	657 aa		9.34	□□□□□ -0.91
RBM41-208	ENST00000495517	CIZ1	Q9ULV3	898 aa	Predicted RBP	9.34	□□□□□ -0.91
RBM41-208	ENST00000495517	RGPD5	Q99666	1765 aa		9.34	□□□□□ -0.91
RBM41-208	ENST00000495517	PPP2R1A	P30153	589 aa		9.34	□□□□□ -0.91
RBM41-208	ENST00000495517	NKX1-1	Q15270	411 aa	Predicted RBP	9.34	□□□□□ -0.91
RBM41-208	ENST00000495517	NEUROD2	Q15784	382 aa		9.34	□□□□□ -0.91
RBM41-208	ENST00000495517	KNSTRN	Q9Y448	316 aa		9.33	□□□□□ -0.92
RBM41-208	ENST00000495517	IBTK	Q9P2D0	1353 aa	Predicted RBP	9.33	□□□□□ -0.92
RBM41-208	ENST00000495517	POGK	Q9P215	609 aa		9.33	□□□□□ -0.92
RBM41-208	ENST00000495517	LAMB4	A4D0S4	1761 aa		9.32	□□□□□ -0.92
RBM41-208	ENST00000495517	RREB1	Q92766	1687 aa		9.32	□□□□□ -0.92
RBM41-208	ENST00000495517	PDE3B	Q13370	1112 aa		9.32	□□□□□ -0.92
RBM41-208	ENST00000495517		U3KPZ7	1027 aa	Predicted RBP	9.32	□□□□□ -0.92
RBM41-208	ENST00000495517	RNF123	Q5XPI4	1314 aa		9.32	□□□□□ -0.92
RBM41-208	ENST00000495517	TTC21B	Q7Z4L5	1316 aa		9.32	□□□□□ -0.92
RBM41-208	ENST00000495517	FYB1	O15117	783 aa		9.32	□□□□□ -0.92
RBM41-208	ENST00000495517	RGPD2	P0DJD1	1756 aa		9.32	□□□□□ -0.92
RBM41-208	ENST00000495517	NCKAP5L	Q9HCH0	1330 aa		9.31	□□□□□ -0.92
RBM41-208	ENST00000495517	YTHDC1	Q96MU7	727 aa	Known RBP	9.31	□□□□□ -0.92
RBM41-208	ENST00000495517	SOS2	Q07890	1332 aa	Predicted RBP	9.31	□□□□□ -0.92
RBM41-208	ENST00000495517	MSH6	P52701	1360 aa		9.31	□□□□□ -0.92
RBM41-208	ENST00000495517	TMEM94	Q12767	1356 aa		9.31	□□□□□ -0.92
RBM41-208	ENST00000495517	TRMT2A	Q8IZ69	625 aa	Known RBP	9.3	□□□□□ -0.92
RBM41-208	ENST00000495517	WAPL	Q7Z5K2	1190 aa		9.3	□□□□□ -0.92
RBM41-208	ENST00000495517	RGPD3	A6NKT7	1758 aa	Predicted RBP	9.29	□□□□□ -0.92
RBM41-208	ENST00000495517	RGPD4	Q7Z3J3	1758 aa		9.29	□□□□□ -0.92
RBM41-208	ENST00000495517	CADPS2	Q86UW7	1296 aa		9.29	□□□□□ -0.92
RBM41-208	ENST00000495517	IL16	Q14005	1332 aa		9.29	□□□□□ -0.92
RBM41-208	ENST00000495517	ACE	P12821	1306 aa		9.28	□□□□□ -0.92
RBM41-208	ENST00000495517	GLI3	P10071	1580 aa		9.28	□□□□□ -0.92
RBM41-208	ENST00000495517	LMOD2	Q6P5Q4	547 aa		9.28	□□□□□ -0.92
RBM41-208	ENST00000495517	SLC12A5	Q9H2X9	1139 aa		9.28	□□□□□ -0.92
RBM41-208	ENST00000495517	THSD7A	Q9UPZ6	1657 aa		9.28	□□□□□ -0.92
RBM41-208	ENST00000495517	FLT4	P35916	1363 aa		9.27	□□□□□ -0.92
RBM41-208	ENST00000495517	CABP2	Q9NPB3	220 aa		9.27	□□□□□ -0.93
RBM41-208	ENST00000495517	MINK1	Q8N4C8	1332 aa	Predicted RBP	9.27	□□□□□ -0.93
RBM41-208	ENST00000495517	ERICH6B	Q5W0A0	696 aa		9.26	□□□□□ -0.93
RBM41-208	ENST00000495517	RNF25	Q96BH1	459 aa	Predicted RBP	9.26	□□□□□ -0.93
RBM41-208	ENST00000495517	PNN	Q9H307	717 aa	Known RBP	9.26	□□□□□ -0.93
RBM41-208	ENST00000495517	C1orf115	Q9H7X2	142 aa		9.26	□□□□□ -0.93
RBM41-208	ENST00000495517	PLEKHF1	Q96S99	279 aa		9.26	□□□□□ -0.93
RBM41-208	ENST00000495517	ANP32E	Q9BTT0	268 aa		9.26	□□□□□ -0.93
RBM41-208	ENST00000495517	CABP1	Q9NZU7	370 aa		9.26	□□□□□ -0.93
RBM41-208	ENST00000495517	SOS1	Q07889	1333 aa	Predicted RBP	9.25	□□□□□ -0.93
RBM41-208	ENST00000495517	SLC26A8	Q96RN1	970 aa		9.25	□□□□□ -0.93
RBM41-208	ENST00000495517	SRPK2	P78362	688 aa	Known RBP	9.24	□□□□□ -0.93
RBM41-208	ENST00000495517	KCNH5	Q8NCM2	988 aa		9.24	□□□□□ -0.93
RBM41-208	ENST00000495517	BABAM1	Q9NWV8	329 aa		9.24	□□□□□ -0.93
RBM41-208	ENST00000495517	PHF8	Q9UPP1	1060 aa		9.24	□□□□□ -0.93
RBM41-208	ENST00000495517	NPHP3	Q7Z494	1330 aa		9.23	□□□□□ -0.93
RBM41-208	ENST00000495517	IGSF1	Q8N6C5	1336 aa		9.23	□□□□□ -0.93
RBM41-208	ENST00000495517	CT47B1	P0C2W7	299 aa	Predicted RBP	9.23	□□□□□ -0.93
RBM41-208	ENST00000495517	PLCD3	Q8N3E9	789 aa		9.23	□□□□□ -0.93
RBM41-208	ENST00000495517	SLC24A3	Q9HC58	644 aa		9.23	□□□□□ -0.93
RBM41-208	ENST00000495517	BCL9	O00512	1426 aa		9.23	□□□□□ -0.93
RBM41-208	ENST00000495517	SPATA31A3	Q5VYP0	1347 aa		9.23	□□□□□ -0.93
RBM41-208	ENST00000495517	SAMD1	Q6SPF0	538 aa	Predicted RBP	9.23	□□□□□ -0.93
RBM41-208	ENST00000495517	HTATSF1	O43719	755 aa	Known RBP	9.22	□□□□□ -0.93
RBM41-208	ENST00000495517	IL13	P35225	146 aa		9.22	□□□□□ -0.93
RBM41-208	ENST00000495517	PSME1	Q06323	249 aa		9.22	□□□□□ -0.93
RBM41-208	ENST00000495517	NUTM2D	Q5VT03	806 aa	Predicted RBP	9.22	□□□□□ -0.93
RBM41-208	ENST00000495517	HIRIP3	Q9BW71	556 aa	Predicted RBP	9.22	□□□□□ -0.93
RBM41-208	ENST00000495517	FCHSD2	O94868	740 aa		9.22	□□□□□ -0.93
RBM41-208	ENST00000495517	POLK	Q9UBT6	870 aa		9.22	□□□□□ -0.93
RBM41-208	ENST00000495517	WDR63	Q8IWG1	891 aa		9.21	□□□□□ -0.93
RBM41-208	ENST00000495517	STK26	Q9P289	416 aa		9.21	□□□□□ -0.93
RBM41-208	ENST00000495517	DISP2	A7MBM2	1401 aa		9.21	□□□□□ -0.94
RBM41-208	ENST00000495517	TOGARAM1	Q9Y4F4	1720 aa		9.21	□□□□□ -0.94
RBM41-208	ENST00000495517	CFAP53	Q96M91	514 aa		9.2	□□□□□ -0.94
RBM41-208	ENST00000495517	MORC1	Q86VD1	984 aa		9.2	□□□□□ -0.94
RBM41-208	ENST00000495517	GTPBP6	O43824	516 aa	Predicted RBP	9.2	□□□□□ -0.94
RBM41-208	ENST00000495517	QSER1	Q2KHR3	1735 aa		9.19	□□□□□ -0.94
RBM41-208	ENST00000495517	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	9.19	□□□□□ -0.94
RBM41-208	ENST00000495517	COG3	Q96JB2	828 aa		9.19	□□□□□ -0.94
RBM41-208	ENST00000495517	SLIT2	O94813	1529 aa		9.19	□□□□□ -0.94
RBM41-208	ENST00000495517	COL5A2	P05997	1499 aa	Predicted RBP	9.18	□□□□□ -0.94
RBM41-208	ENST00000495517	RUNDC1	Q96C34	613 aa		9.18	□□□□□ -0.94
RBM41-208	ENST00000495517	PROSER2	Q86WR7	435 aa	Predicted RBP	9.18	□□□□□ -0.94
RBM41-208	ENST00000495517	ZNF428	Q96B54	188 aa		9.18	□□□□□ -0.94
RBM41-208	ENST00000495517	RSPH6A	Q9H0K4	717 aa		9.18	□□□□□ -0.94
RBM41-208	ENST00000495517	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	9.18	□□□□□ -0.94	1e-6	■■■■□ 25.5
RBM41-208	ENST00000495517	ITGB4	P16144	1822 aa		9.18	□□□□□ -0.94
RBM41-208	ENST00000495517	NHS	Q6T4R5	1651 aa		9.17	□□□□□ -0.94
RBM41-208	ENST00000495517	KCNV2	Q8TDN2	545 aa		9.17	□□□□□ -0.94
RBM41-208	ENST00000495517	IP6K1	Q92551	441 aa		9.17	□□□□□ -0.94
RBM41-208	ENST00000495517	MRS2	Q9HD23	443 aa		9.17	□□□□□ -0.94
RBM41-208	ENST00000495517	COL5A3	P25940	1745 aa	Predicted RBP	9.17	□□□□□ -0.94
RBM41-208	ENST00000495517	CEMIP	Q8WUJ3	1361 aa		9.17	□□□□□ -0.94
RBM41-208	ENST00000495517	CCDC184	Q52MB2	194 aa		9.17	□□□□□ -0.94
RBM41-208	ENST00000495517	BRINP3	Q76B58	766 aa		9.17	□□□□□ -0.94
RBM41-208	ENST00000495517	ARHGEF25	Q86VW2	580 aa		9.17	□□□□□ -0.94
RBM41-208	ENST00000495517	C5	P01031	1676 aa		9.17	□□□□□ -0.94
RBM41-208	ENST00000495517	NECTIN2	Q92692	538 aa		9.16	□□□□□ -0.94
RBM41-208	ENST00000495517	NUP188	Q5SRE5	1749 aa		9.16	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms