RNA–Protein interactions for RNA: ENST00000495300.1

PBX2-204, Transcript of PBX homeobox 2, human

TSL 3

Gene PBX2, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PBX2-204	ENST00000495300	CGNL1	Q0VF96	1302 aa		18.91	■□□□□ 0.62
PBX2-204	ENST00000495300	RGS12	O14924	1447 aa		18.91	■□□□□ 0.62
PBX2-204	ENST00000495300	SPATA31A5	Q5VU36	1347 aa		18.9	■□□□□ 0.62
PBX2-204	ENST00000495300	SPATA31A7	Q8IWB4	1347 aa		18.9	■□□□□ 0.62
PBX2-204	ENST00000495300	PER1	O15534	1290 aa	Predicted RBP	18.89	■□□□□ 0.61
PBX2-204	ENST00000495300	ONECUT3	O60422	494 aa	Predicted RBP	18.89	■□□□□ 0.61
PBX2-204	ENST00000495300	FBLN1	P23142	703 aa		18.89	■□□□□ 0.61
PBX2-204	ENST00000495300	ZBTB7C	A1YPR0	619 aa		18.87	■□□□□ 0.61
PBX2-204	ENST00000495300	SPATA31A1	Q5TZJ5	1347 aa		18.87	■□□□□ 0.61
PBX2-204	ENST00000495300	LARP1	Q6PKG0	1096 aa	Known RBP	18.87	■□□□□ 0.61
PBX2-204	ENST00000495300	STRN4	Q9NRL3	753 aa		18.87	■□□□□ 0.61
PBX2-204	ENST00000495300	NSD2	O96028	1365 aa		18.86	■□□□□ 0.61
PBX2-204	ENST00000495300	MAP3K19	Q56UN5	1328 aa		18.86	■□□□□ 0.61
PBX2-204	ENST00000495300	EVA1C	P58658	441 aa		18.86	■□□□□ 0.61
PBX2-204	ENST00000495300	THSD7A	Q9UPZ6	1657 aa		18.85	■□□□□ 0.61
PBX2-204	ENST00000495300	CRB1	P82279	1406 aa		18.85	■□□□□ 0.61
PBX2-204	ENST00000495300	BRWD3	Q6RI45	1802 aa		18.85	■□□□□ 0.61
PBX2-204	ENST00000495300	PEAK1	Q9H792	1746 aa		18.85	■□□□□ 0.61
PBX2-204	ENST00000495300	BLM	P54132	1417 aa	Predicted RBP	18.84	■□□□□ 0.61
PBX2-204	ENST00000495300	MAP2	P11137	1827 aa	Known RBP	18.84	■□□□□ 0.61
PBX2-204	ENST00000495300	WDR17	Q8IZU2	1322 aa		18.84	■□□□□ 0.61
PBX2-204	ENST00000495300	AMER1	Q5JTC6	1135 aa	Predicted RBP	18.84	■□□□□ 0.61
PBX2-204	ENST00000495300	IP6K1	Q92551	441 aa		18.84	■□□□□ 0.61
PBX2-204	ENST00000495300	CCDC9	Q9Y3X0	531 aa	Known RBP	18.84	■□□□□ 0.61
PBX2-204	ENST00000495300	KNSTRN	Q9Y448	316 aa		18.84	■□□□□ 0.61
PBX2-204	ENST00000495300	RTL1	A6NKG5	1358 aa		18.82	■□□□□ 0.6
PBX2-204	ENST00000495300	SOCS7	O14512	581 aa		18.82	■□□□□ 0.6
PBX2-204	ENST00000495300	RRS1	Q15050	365 aa	Known RBP	18.82	■□□□□ 0.6
PBX2-204	ENST00000495300	KIF24	Q5T7B8	1368 aa		18.81	■□□□□ 0.6
PBX2-204	ENST00000495300	WNK3	Q9BYP7	1800 aa		18.81	■□□□□ 0.6
PBX2-204	ENST00000495300	ERBB3	P21860	1342 aa		18.81	■□□□□ 0.6
PBX2-204	ENST00000495300	HOXC9	P31274	260 aa		18.81	■□□□□ 0.6
PBX2-204	ENST00000495300	FAM98C	Q17RN3	349 aa	Known RBP	18.81	■□□□□ 0.6
PBX2-204	ENST00000495300	BARGIN	Q6ZT62	677 aa		18.81	■□□□□ 0.6
PBX2-204	ENST00000495300	FAM208A	Q9UK61	1670 aa	Known RBP	18.8	■□□□□ 0.6
PBX2-204	ENST00000495300	SEPT12	Q8IYM1	358 aa		18.8	■□□□□ 0.6
PBX2-204	ENST00000495300	TCP11L2	Q8N4U5	519 aa		18.79	■□□□□ 0.6
PBX2-204	ENST00000495300	THRAP3	Q9Y2W1	955 aa	Known RBP	18.79	■□□□□ 0.6
PBX2-204	ENST00000495300	NPC1L1	Q9UHC9	1359 aa		18.79	■□□□□ 0.6
PBX2-204	ENST00000495300	PARP4	Q9UKK3	1724 aa	Known RBP	18.78	■□□□□ 0.6
PBX2-204	ENST00000495300	AMPH	P49418	695 aa		18.78	■□□□□ 0.6
PBX2-204	ENST00000495300	TOM1L2	Q6ZVM7	507 aa		18.78	■□□□□ 0.6
PBX2-204	ENST00000495300	ANKRD24	Q8TF21	1146 aa		18.78	■□□□□ 0.6
PBX2-204	ENST00000495300	USP35	Q9P2H5	1018 aa		18.78	■□□□□ 0.6
PBX2-204	ENST00000495300	RGPD2	P0DJD1	1756 aa		18.78	■□□□□ 0.6
PBX2-204	ENST00000495300	CARD10	Q9BWT7	1032 aa		18.77	■□□□□ 0.6
PBX2-204	ENST00000495300	POLK	Q9UBT6	870 aa		18.77	■□□□□ 0.6
PBX2-204	ENST00000495300	EMILIN1	Q9Y6C2	1016 aa		18.77	■□□□□ 0.6
PBX2-204	ENST00000495300	FLT4	P35916	1363 aa		18.77	■□□□□ 0.6
PBX2-204	ENST00000495300	INSR	P06213	1382 aa		18.76	■□□□□ 0.59
PBX2-204	ENST00000495300	SMG6	Q86US8	1419 aa	Known RBP	18.75	■□□□□ 0.59
PBX2-204	ENST00000495300	CSB-PGBD3	P0DP91	1061 aa		18.75	■□□□□ 0.59
PBX2-204	ENST00000495300	MORC1	Q86VD1	984 aa		18.75	■□□□□ 0.59
PBX2-204	ENST00000495300	EP400	Q96L91	3159 aa		18.75	■□□□□ 0.59
PBX2-204	ENST00000495300	DISP2	A7MBM2	1401 aa		18.74	■□□□□ 0.59
PBX2-204	ENST00000495300	HSP90AB2P	Q58FF8	381 aa		18.74	■□□□□ 0.59
PBX2-204	ENST00000495300	TNNT2	P45379	298 aa	Predicted RBP	18.73	■□□□□ 0.59
PBX2-204	ENST00000495300	LRRC37A3	O60309	1634 aa		18.73	■□□□□ 0.59
PBX2-204	ENST00000495300	KRT27	Q7Z3Y8	459 aa		18.72	■□□□□ 0.59
PBX2-204	ENST00000495300	CC2D1B	Q5T0F9	858 aa	Known RBP	18.71	■□□□□ 0.59
PBX2-204	ENST00000495300	LTV1	Q96GA3	475 aa	Predicted RBP	18.71	■□□□□ 0.59
PBX2-204	ENST00000495300	NLRP2	Q9NX02	1062 aa		18.71	■□□□□ 0.59
PBX2-204	ENST00000495300		A0A0G2JS52	829 aa		18.69	■□□□□ 0.58
PBX2-204	ENST00000495300	PPM1G	O15355	546 aa	Predicted RBP	18.69	■□□□□ 0.58
PBX2-204	ENST00000495300	MYT1	Q01538	1121 aa		18.69	■□□□□ 0.58
PBX2-204	ENST00000495300	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.69	■□□□□ 0.58
PBX2-204	ENST00000495300	NBPF6	Q5VWK0	638 aa		18.68	■□□□□ 0.58
PBX2-204	ENST00000495300	UPF1	Q92900	1129 aa	Known RBP eCLIP	18.68	■□□□□ 0.58
PBX2-204	ENST00000495300	NBPF4	Q96M43	638 aa		18.68	■□□□□ 0.58
PBX2-204	ENST00000495300	NCAPD2	Q15021	1401 aa		18.67	■□□□□ 0.58
PBX2-204	ENST00000495300	IL2RB	P14784	551 aa		18.64	■□□□□ 0.57
PBX2-204	ENST00000495300	EIF4A2	Q14240	407 aa	Known RBP	18.64	■□□□□ 0.57
PBX2-204	ENST00000495300	DDB1	Q16531	1140 aa		18.64	■□□□□ 0.57
PBX2-204	ENST00000495300	RGPD1	P0DJD0	1748 aa		18.63	■□□□□ 0.57
PBX2-204	ENST00000495300	DDX10	Q13206	875 aa	Known RBP	18.63	■□□□□ 0.57
PBX2-204	ENST00000495300	PDE3B	Q13370	1112 aa		18.63	■□□□□ 0.57
PBX2-204	ENST00000495300	FAM182B	Q5T319	152 aa		18.63	■□□□□ 0.57
PBX2-204	ENST00000495300	TNS2	Q63HR2	1409 aa		18.63	■□□□□ 0.57
PBX2-204	ENST00000495300	MEGF6	O75095	1541 aa		18.63	■□□□□ 0.57
PBX2-204	ENST00000495300	SHANK3	Q9BYB0	1731 aa		18.63	■□□□□ 0.57
PBX2-204	ENST00000495300	MTHFS	P49914	203 aa		18.62	■□□□□ 0.57
PBX2-204	ENST00000495300	EXOC5	O00471	708 aa		18.61	■□□□□ 0.57
PBX2-204	ENST00000495300	USHBP1	Q8N6Y0	703 aa		18.61	■□□□□ 0.57
PBX2-204	ENST00000495300	EYA1	Q99502	592 aa		18.61	■□□□□ 0.57
PBX2-204	ENST00000495300	SBF2	Q86WG5	1849 aa		18.6	■□□□□ 0.57
PBX2-204	ENST00000495300	OVOS2	A0A0G2JMS6	1433 aa		18.6	■□□□□ 0.57
PBX2-204	ENST00000495300	CNGB1	Q14028	1251 aa	Predicted RBP	18.6	■□□□□ 0.57
PBX2-204	ENST00000495300	FAM196A	Q6ZSG2	479 aa		18.6	■□□□□ 0.57
PBX2-204	ENST00000495300	MARCH10	Q8NA82	808 aa	Predicted RBP	18.6	■□□□□ 0.57
PBX2-204	ENST00000495300	COL3A1	P02461	1466 aa	Predicted RBP	18.59	■□□□□ 0.57
PBX2-204	ENST00000495300	BCL9	O00512	1426 aa		18.59	■□□□□ 0.57
PBX2-204	ENST00000495300	PARD3	Q8TEW0	1356 aa		18.59	■□□□□ 0.57
PBX2-204	ENST00000495300	IGSF1	Q8N6C5	1336 aa		18.59	■□□□□ 0.57
PBX2-204	ENST00000495300	ZNF316	A6NFI3	1004 aa	Predicted RBP	18.59	■□□□□ 0.57
PBX2-204	ENST00000495300	TNS1	Q9HBL0	1735 aa	Known RBP	18.59	■□□□□ 0.57
PBX2-204	ENST00000495300	PKD1L3	Q7Z443	1732 aa		18.58	■□□□□ 0.57
PBX2-204	ENST00000495300	IL13	P35225	146 aa		18.58	■□□□□ 0.56
PBX2-204	ENST00000495300	CCDC125	Q86Z20	511 aa		18.58	■□□□□ 0.56
PBX2-204	ENST00000495300	PPP2R1A	P30153	589 aa		18.56	■□□□□ 0.56
PBX2-204	ENST00000495300	RAPGEF4	Q8WZA2	1011 aa		18.54	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms