RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 SCARF1Q14162 830 aa8.74□□□□□ -1.01
RBM39-240ENST00000495293 PPP2R2DQ66LE6 453 aa8.74□□□□□ -1.01
RBM39-240ENST00000495293 VASH1Q7L8A9 365 aaPredicted RBP8.74□□□□□ -1.01
RBM39-240ENST00000495293 LINC00528Q8N1L1 170 aa8.74□□□□□ -1.01
RBM39-240ENST00000495293 NPAS3Q8IXF0 933 aa8.73□□□□□ -1.01
RBM39-240ENST00000495293 FKBPLQ9UIM3 349 aa8.73□□□□□ -1.01
RBM39-240ENST00000495293 SLC16A10Q8TF71 515 aa8.72□□□□□ -1.01
RBM39-240ENST00000495293 IRF7Q92985 503 aa8.72□□□□□ -1.01
RBM39-240ENST00000495293 DNMT3LQ9UJW3 386 aa8.72□□□□□ -1.01
RBM39-240ENST00000495293 ZCCHC6Q5VYS8 1495 aaKnown RBP8.71□□□□□ -1.01
RBM39-240ENST00000495293 MYO15BQ96JP2 1530 aa8.71□□□□□ -1.01
RBM39-240ENST00000495293 CBLBQ13191 982 aa8.71□□□□□ -1.02
RBM39-240ENST00000495293 PDXDC2PQ6P474 469 aa8.71□□□□□ -1.02
RBM39-240ENST00000495293 CCDC116Q8IYX3 515 aa8.7□□□□□ -1.02
RBM39-240ENST00000495293 ZSCAN1Q8NBB4 408 aa8.7□□□□□ -1.02
RBM39-240ENST00000495293 GPKOWQ92917 476 aaPredicted RBP eCLIP8.7□□□□□ -1.02
RBM39-240ENST00000495293 SOS2Q07890 1332 aaPredicted RBP8.7□□□□□ -1.02
RBM39-240ENST00000495293 BMP2P12643 396 aa8.69□□□□□ -1.02
RBM39-240ENST00000495293 SUZ12Q15022 739 aaKnown RBP8.69□□□□□ -1.02
RBM39-240ENST00000495293 PPP1R26Q5T8A7 1209 aaPredicted RBP8.69□□□□□ -1.02
RBM39-240ENST00000495293 DDRGK1Q96HY6 314 aa8.69□□□□□ -1.02
RBM39-240ENST00000495293 ARHGAP9Q9BRR9 750 aa8.69□□□□□ -1.02
RBM39-240ENST00000495293 AP1G2O75843 785 aa8.68□□□□□ -1.02
RBM39-240ENST00000495293 VSIG8P0DPA2 414 aa8.68□□□□□ -1.02
RBM39-240ENST00000495293 USP17L8P0C7I0 530 aa8.67□□□□□ -1.02
RBM39-240ENST00000495293 KCTD15Q96SI1 283 aaPredicted RBP8.67□□□□□ -1.02
RBM39-240ENST00000495293 DCAF1Q9Y4B6 1507 aa8.67□□□□□ -1.02
RBM39-240ENST00000495293 EMILIN1Q9Y6C2 1016 aa8.67□□□□□ -1.02
RBM39-240ENST00000495293 MAN1A2O60476 641 aa8.66□□□□□ -1.02
RBM39-240ENST00000495293 PPFIA3O75145 1194 aa8.66□□□□□ -1.02
RBM39-240ENST00000495293 INTS6LQ5JSJ4 861 aaKnown RBP8.66□□□□□ -1.02
RBM39-240ENST00000495293 Q6ZVU0 165 aa8.66□□□□□ -1.02
RBM39-240ENST00000495293 RFC5P40937 340 aa8.65□□□□□ -1.02
RBM39-240ENST00000495293 ADAM32Q8TC27 787 aa8.65□□□□□ -1.02
RBM39-240ENST00000495293 TRIM34Q9BYJ4 488 aa8.65□□□□□ -1.02
RBM39-240ENST00000495293 SLC10A4Q96EP9 437 aa8.64□□□□□ -1.03
RBM39-240ENST00000495293 AGBL1Q96MI9 1066 aa8.64□□□□□ -1.03
RBM39-240ENST00000495293 ZC3H4Q9UPT8 1303 aaKnown RBP8.63□□□□□ -1.03
RBM39-240ENST00000495293 TSEN34Q9BSV6 310 aaKnown RBP8.63□□□□□ -1.03
RBM39-240ENST00000495293 TMPRSS4Q9NRS4 437 aa8.63□□□□□ -1.03
RBM39-240ENST00000495293 FIGNL2A6NMB9 653 aa8.62□□□□□ -1.03
RBM39-240ENST00000495293 ZBTB33Q86T24 672 aa8.62□□□□□ -1.03
RBM39-240ENST00000495293 GPR161Q8N6U8 529 aaKnown RBP8.62□□□□□ -1.03
RBM39-240ENST00000495293 ATP1B4Q9UN42 357 aaPredicted RBP8.62□□□□□ -1.03
RBM39-240ENST00000495293 SPINT1O43278 529 aa8.61□□□□□ -1.03
RBM39-240ENST00000495293 UPP2O95045 317 aa8.61□□□□□ -1.03
RBM39-240ENST00000495293 KRT76Q01546 638 aa8.61□□□□□ -1.03
RBM39-240ENST00000495293 KDF1Q8NAX2 398 aaPredicted RBP8.61□□□□□ -1.03
RBM39-240ENST00000495293 TTLL8A6PVC2 850 aa8.6□□□□□ -1.03
RBM39-240ENST00000495293 CTSOP43234 321 aaPredicted RBP8.6□□□□□ -1.03
RBM39-240ENST00000495293 LILRA1O75019 489 aa8.59□□□□□ -1.03
RBM39-240ENST00000495293 ADD1P35611 737 aaKnown RBP8.59□□□□□ -1.03
RBM39-240ENST00000495293 PTSQ03393 145 aa8.59□□□□□ -1.03
RBM39-240ENST00000495293 PTK2Q05397 1052 aa8.59□□□□□ -1.03
RBM39-240ENST00000495293 TPRNQ4KMQ1 711 aa8.59□□□□□ -1.03
RBM39-240ENST00000495293 ZNF784Q8NCA9 323 aaPredicted RBP8.59□□□□□ -1.03
RBM39-240ENST00000495293 PGPEP1Q9NXJ5 209 aa8.59□□□□□ -1.03
RBM39-240ENST00000495293 GPSM3Q9Y4H4 160 aa8.59□□□□□ -1.03
RBM39-240ENST00000495293 RAB15P59190 212 aa8.58□□□□□ -1.04
RBM39-240ENST00000495293 RELBQ01201 579 aa8.58□□□□□ -1.04
RBM39-240ENST00000495293 GJD4Q96KN9 370 aaPredicted RBP8.58□□□□□ -1.04
RBM39-240ENST00000495293 INSM2Q96T92 566 aaPredicted RBP8.58□□□□□ -1.04
RBM39-240ENST00000495293 ERVH48-1M5A8F1 160 aa8.57□□□□□ -1.04
RBM39-240ENST00000495293 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.57□□□□□ -1.042e-8■□□□□ 11.3
RBM39-240ENST00000495293 CDV3Q9UKY7 258 aaKnown RBP8.57□□□□□ -1.04
RBM39-240ENST00000495293 ESPNB1AK53 854 aa8.56□□□□□ -1.04
RBM39-240ENST00000495293 GPR37L1O60883 481 aa8.56□□□□□ -1.04
RBM39-240ENST00000495293 ZNF395Q9H8N7 513 aaPredicted RBP8.56□□□□□ -1.04
RBM39-240ENST00000495293 UNC13AQ9UPW8 1703 aa8.55□□□□□ -1.04
RBM39-240ENST00000495293 SLC35F4A4IF30 521 aa8.55□□□□□ -1.04
RBM39-240ENST00000495293 CCDC155Q8N6L0 562 aa8.55□□□□□ -1.04
RBM39-240ENST00000495293 IL27Q8NEV9 243 aa8.55□□□□□ -1.04
RBM39-240ENST00000495293 GOPCQ9HD26 462 aa8.55□□□□□ -1.04
RBM39-240ENST00000495293 SENP3-EIF4A1A0A087X0R7 540 aa8.54□□□□□ -1.04
RBM39-240ENST00000495293 PRKCSHP14314 528 aaPredicted RBP8.54□□□□□ -1.04
RBM39-240ENST00000495293 DHX9Q08211 1270 aaKnown RBP8.54□□□□□ -1.04
RBM39-240ENST00000495293 NEUROD2Q15784 382 aa8.54□□□□□ -1.04
RBM39-240ENST00000495293 FOXD4L5Q5VV16 416 aaPredicted RBP8.54□□□□□ -1.04
RBM39-240ENST00000495293 RNF217Q8TC41 542 aa8.54□□□□□ -1.04
RBM39-240ENST00000495293 NBPF20Q3BBV1 942 aa8.53□□□□□ -1.04
RBM39-240ENST00000495293 RNFT1Q5M7Z0 435 aa8.53□□□□□ -1.04
RBM39-240ENST00000495293 ADH1AP07327 375 aa8.52□□□□□ -1.05
RBM39-240ENST00000495293 FBXO45P0C2W1 286 aa8.52□□□□□ -1.05
RBM39-240ENST00000495293 BRPF1P55201 1214 aaPredicted RBP8.52□□□□□ -1.05
RBM39-240ENST00000495293 DZIP3Q86Y13 1208 aaKnown RBP8.52□□□□□ -1.05
RBM39-240ENST00000495293 SCRIBQ14160 1630 aa8.51□□□□□ -1.05
RBM39-240ENST00000495293 PCMTD1Q96MG8 357 aaPredicted RBP8.51□□□□□ -1.05
RBM39-240ENST00000495293 GIGYF1O75420 1035 aaPredicted RBP8.5□□□□□ -1.05
RBM39-240ENST00000495293 GSK3AP49840 483 aa8.5□□□□□ -1.05
RBM39-240ENST00000495293 NANOS1Q8WY41 292 aaKnown RBP8.5□□□□□ -1.05
RBM39-240ENST00000495293 CNTNAP3BQ96NU0 1288 aa8.5□□□□□ -1.05
RBM39-240ENST00000495293 CNTNAP3Q9BZ76 1288 aa8.5□□□□□ -1.05
RBM39-240ENST00000495293 POLMQ9NP87 494 aaPredicted RBP8.5□□□□□ -1.05
RBM39-240ENST00000495293 CYLDQ9NQC7 956 aa8.5□□□□□ -1.05
RBM39-240ENST00000495293 COL25A1Q9BXS0 654 aaPredicted RBP8.49□□□□□ -1.05
RBM39-240ENST00000495293 CUEDC1Q9NWM3 386 aaPredicted RBP8.49□□□□□ -1.05
RBM39-240ENST00000495293 ITGA6P23229 1130 aa8.48□□□□□ -1.05
RBM39-240ENST00000495293 PTGIRP43119 386 aa8.48□□□□□ -1.05
RBM39-240ENST00000495293 KCNMA1Q12791 1236 aa8.48□□□□□ -1.05
RBM39-240ENST00000495293 TMEM259Q4ZIN3 620 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms