RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 TLL2Q9Y6L7 1015 aa9.68□□□□□ -0.86
SRRM1-218ENST00000494934 LMOD1P29536 600 aaPredicted RBP9.67□□□□□ -0.86
SRRM1-218ENST00000494934 SOX11P35716 441 aa9.67□□□□□ -0.86
SRRM1-218ENST00000494934 FOXC1Q12948 553 aa9.67□□□□□ -0.86
SRRM1-218ENST00000494934 TBC1D9Q6ZT07 1266 aa9.67□□□□□ -0.86
SRRM1-218ENST00000494934 MPNDQ8N594 471 aa9.67□□□□□ -0.86
SRRM1-218ENST00000494934 TFIP11Q9UBB9 837 aaKnown RBP9.67□□□□□ -0.86
SRRM1-218ENST00000494934 KCTD17Q8N5Z5 321 aa9.66□□□□□ -0.86
SRRM1-218ENST00000494934 TOR4AQ9NXH8 423 aa9.66□□□□□ -0.86
SRRM1-218ENST00000494934 MAFBQ9Y5Q3 323 aaPredicted RBP9.66□□□□□ -0.86
SRRM1-218ENST00000494934 GRM5P41594 1212 aa9.65□□□□□ -0.86
SRRM1-218ENST00000494934 EIF4G2P78344 907 aaKnown RBP eCLIP9.65□□□□□ -0.86
SRRM1-218ENST00000494934 PRR20EP86478 221 aa9.65□□□□□ -0.86
SRRM1-218ENST00000494934 PRR20CP86479 221 aa9.65□□□□□ -0.86
SRRM1-218ENST00000494934 PRR20DP86480 221 aa9.65□□□□□ -0.86
SRRM1-218ENST00000494934 PRR20BP86481 221 aa9.65□□□□□ -0.86
SRRM1-218ENST00000494934 PRR20AP86496 221 aa9.65□□□□□ -0.86
SRRM1-218ENST00000494934 SEMA3FQ13275 785 aa9.65□□□□□ -0.86
SRRM1-218ENST00000494934 PHTF2Q8N3S3 785 aa9.65□□□□□ -0.86
SRRM1-218ENST00000494934 FAM174AQ8TBP5 190 aa9.65□□□□□ -0.86
SRRM1-218ENST00000494934 CEP126Q9P2H0 1117 aa9.65□□□□□ -0.86
SRRM1-218ENST00000494934 PCDHB9Q9Y5E1 797 aa9.65□□□□□ -0.86
SRRM1-218ENST00000494934 ESPNB1AK53 854 aa9.64□□□□□ -0.87
SRRM1-218ENST00000494934 TNFRSF10AO00220 468 aa9.64□□□□□ -0.87
SRRM1-218ENST00000494934 PIK3CDO00329 1044 aa9.64□□□□□ -0.87
SRRM1-218ENST00000494934 CDCA8Q53HL2 280 aa9.64□□□□□ -0.87
SRRM1-218ENST00000494934 MAP4K5Q9Y4K4 846 aa9.64□□□□□ -0.87
SRRM1-218ENST00000494934 ACIN1Q9UKV3 1341 aaKnown RBP9.62□□□□□ -0.87
SRRM1-218ENST00000494934 GIGYF1O75420 1035 aaPredicted RBP9.62□□□□□ -0.87
SRRM1-218ENST00000494934 DZIP3Q86Y13 1208 aaKnown RBP9.62□□□□□ -0.87
SRRM1-218ENST00000494934 J3QL48 77 aa9.61□□□□□ -0.87
SRRM1-218ENST00000494934 TSGA10IPQ3SY00 556 aa9.61□□□□□ -0.87
SRRM1-218ENST00000494934 SLC10A4Q96EP9 437 aa9.61□□□□□ -0.87
SRRM1-218ENST00000494934 CHIC2Q9UKJ5 165 aa9.61□□□□□ -0.87
SRRM1-218ENST00000494934 USTQ9Y2C2 406 aa9.61□□□□□ -0.87
SRRM1-218ENST00000494934 ATP9BO43861 1147 aa9.6□□□□□ -0.87
SRRM1-218ENST00000494934 MCCD1P59942 119 aaPredicted RBP9.6□□□□□ -0.87
SRRM1-218ENST00000494934 SNIP1Q8TAD8 396 aaKnown RBP9.6□□□□□ -0.87
SRRM1-218ENST00000494934 KCTD15Q96SI1 283 aaPredicted RBP9.6□□□□□ -0.87
SRRM1-218ENST00000494934 CCDC9Q9Y3X0 531 aaKnown RBP9.6□□□□□ -0.87
SRRM1-218ENST00000494934 NR3C2P08235 984 aa9.59□□□□□ -0.87
SRRM1-218ENST00000494934 SMPD1P17405 629 aa9.59□□□□□ -0.87
SRRM1-218ENST00000494934 INTS6LQ5JSJ4 861 aaKnown RBP9.59□□□□□ -0.87
SRRM1-218ENST00000494934 TMEM88BA6NKF7 163 aa9.58□□□□□ -0.88
SRRM1-218ENST00000494934 ATG7O95352 703 aa9.58□□□□□ -0.88
SRRM1-218ENST00000494934 ADH1CP00326 375 aa9.58□□□□□ -0.88
SRRM1-218ENST00000494934 CSB-PGBD3P0DP91 1061 aa9.58□□□□□ -0.88
SRRM1-218ENST00000494934 VASH1Q7L8A9 365 aaPredicted RBP9.58□□□□□ -0.88
SRRM1-218ENST00000494934 CCDC85AQ96PX6 553 aaPredicted RBP9.58□□□□□ -0.88
SRRM1-218ENST00000494934 CDV3Q9UKY7 258 aaKnown RBP9.58□□□□□ -0.88
SRRM1-218ENST00000494934 ALDH1A1P00352 501 aa9.57□□□□□ -0.88
SRRM1-218ENST00000494934 ARID5BQ14865 1188 aa9.57□□□□□ -0.88
SRRM1-218ENST00000494934 FSHRP23945 695 aa9.56□□□□□ -0.88
SRRM1-218ENST00000494934 KANK4Q5T7N3 995 aaPredicted RBP9.56□□□□□ -0.88
SRRM1-218ENST00000494934 TRAF7Q6Q0C0 670 aa9.56□□□□□ -0.88
SRRM1-218ENST00000494934 KLF16Q9BXK1 252 aaPredicted RBP9.56□□□□□ -0.88
SRRM1-218ENST00000494934 PDZRN3Q9UPQ7 1066 aa9.56□□□□□ -0.88
SRRM1-218ENST00000494934 NBPF20Q3BBV1 942 aa9.55□□□□□ -0.88
SRRM1-218ENST00000494934 CYP4X1Q8N118 509 aa9.55□□□□□ -0.88
SRRM1-218ENST00000494934 GZF1Q9H116 711 aaPredicted RBP9.55□□□□□ -0.88
SRRM1-218ENST00000494934 ZMIZ1Q9ULJ6 1067 aa9.55□□□□□ -0.88
SRRM1-218ENST00000494934 USP17L3A6NCW0 530 aa9.54□□□□□ -0.88
SRRM1-218ENST00000494934 USP17L4A6NCW7 530 aa9.54□□□□□ -0.88
SRRM1-218ENST00000494934 NR5A1Q13285 461 aa9.54□□□□□ -0.88
SRRM1-218ENST00000494934 USP17L2Q6R6M4 530 aa9.54□□□□□ -0.88
SRRM1-218ENST00000494934 USP17L1Q7RTZ2 530 aa9.54□□□□□ -0.88
SRRM1-218ENST00000494934 CDCA7Q9BWT1 371 aaPredicted RBP9.54□□□□□ -0.88
SRRM1-218ENST00000494934 USP17L5A8MUK1 530 aa9.53□□□□□ -0.88
SRRM1-218ENST00000494934 ERVH48-1M5A8F1 160 aa9.53□□□□□ -0.88
SRRM1-218ENST00000494934 NNTQ13423 1086 aa9.53□□□□□ -0.88
SRRM1-218ENST00000494934 SEPT12Q8IYM1 358 aa9.53□□□□□ -0.88
SRRM1-218ENST00000494934 DEPDC4Q8N2C3 294 aa9.53□□□□□ -0.88
SRRM1-218ENST00000494934 ZNF592Q92610 1267 aa9.53□□□□□ -0.88
SRRM1-218ENST00000494934 TMPRSS4Q9NRS4 437 aa9.53□□□□□ -0.88
SRRM1-218ENST00000494934 TTC24A2A3L6 582 aaPredicted RBP9.52□□□□□ -0.89
SRRM1-218ENST00000494934 BRD1O95696 1058 aa9.52□□□□□ -0.89
SRRM1-218ENST00000494934 SKIP12755 728 aa9.52□□□□□ -0.89
SRRM1-218ENST00000494934 NFATC2IPQ8NCF5 419 aa9.52□□□□□ -0.89
SRRM1-218ENST00000494934 STK32AQ8WU08 396 aa9.52□□□□□ -0.89
SRRM1-218ENST00000494934 HPS1Q92902 700 aa9.52□□□□□ -0.89
SRRM1-218ENST00000494934 RAB15P59190 212 aa9.51□□□□□ -0.89
SRRM1-218ENST00000494934 PDE4CQ08493 712 aa9.51□□□□□ -0.89
SRRM1-218ENST00000494934 SLFNL1Q499Z3 407 aa9.51□□□□□ -0.89
SRRM1-218ENST00000494934 NPM2Q86SE8 214 aaKnown RBP9.51□□□□□ -0.89
SRRM1-218ENST00000494934 RNF135Q8IUD6 432 aa9.51□□□□□ -0.89
SRRM1-218ENST00000494934 PLEKHM2Q8IWE5 1019 aa9.51□□□□□ -0.89
SRRM1-218ENST00000494934 PLPP7Q8NBV4 271 aa9.51□□□□□ -0.89
SRRM1-218ENST00000494934 LILRA1O75019 489 aa9.5□□□□□ -0.89
SRRM1-218ENST00000494934 KCNA1Q09470 495 aa9.5□□□□□ -0.89
SRRM1-218ENST00000494934 PPP1R26Q5T8A7 1209 aaPredicted RBP9.5□□□□□ -0.89
SRRM1-218ENST00000494934 TMEM164Q5U3C3 297 aa9.5□□□□□ -0.89
SRRM1-218ENST00000494934 CCDC116Q8IYX3 515 aa9.5□□□□□ -0.89
SRRM1-218ENST00000494934 VRTNQ9H8Y1 702 aa9.5□□□□□ -0.89
SRRM1-218ENST00000494934 GFRA3O60609 400 aa9.49□□□□□ -0.89
SRRM1-218ENST00000494934 SCTRP47872 440 aa9.49□□□□□ -0.89
SRRM1-218ENST00000494934 TMCO4Q5TGY1 634 aa9.49□□□□□ -0.89
SRRM1-218ENST00000494934 WASF2Q9Y6W5 498 aa9.49□□□□□ -0.89
SRRM1-218ENST00000494934 NRG2O14511 850 aaPredicted RBP9.48□□□□□ -0.89
SRRM1-218ENST00000494934 TIMP2P16035 220 aa9.48□□□□□ -0.89
SRRM1-218ENST00000494934 CRTC2Q53ET0 693 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms