RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 ONECUT3O60422 494 aaPredicted RBP23.7■■□□□ 1.38
SNX17-209ENST00000494893 LARP1Q6PKG0 1096 aaKnown RBP23.7■■□□□ 1.38
SNX17-209ENST00000494893 PANK3Q9H999 370 aa23.7■■□□□ 1.38
SNX17-209ENST00000494893 SPATA31A1Q5TZJ5 1347 aa23.69■■□□□ 1.38
SNX17-209ENST00000494893 KIF20BQ96Q89 1820 aa23.69■■□□□ 1.38
SNX17-209ENST00000494893 CCDC7Q96M83 1385 aa23.68■■□□□ 1.38
SNX17-209ENST00000494893 ABCC6O95255 1503 aa23.68■■□□□ 1.38
SNX17-209ENST00000494893 WASHC2AQ641Q2 1341 aa23.67■■□□□ 1.38
SNX17-209ENST00000494893 LTN1O94822 1766 aa23.66■■□□□ 1.38
SNX17-209ENST00000494893 EVA1CP58658 441 aa23.66■■□□□ 1.38
SNX17-209ENST00000494893 FAM98CQ17RN3 349 aaKnown RBP23.66■■□□□ 1.38
SNX17-209ENST00000494893 RGPD5Q99666 1765 aa23.65■■□□□ 1.38
SNX17-209ENST00000494893 SEPT12Q8IYM1 358 aa23.65■■□□□ 1.38
SNX17-209ENST00000494893 THSD7AQ9UPZ6 1657 aa23.64■■□□□ 1.38
SNX17-209ENST00000494893 MAP3K19Q56UN5 1328 aa23.63■■□□□ 1.37
SNX17-209ENST00000494893 CGNL1Q0VF96 1302 aa23.62■■□□□ 1.37
SNX17-209ENST00000494893 WDR17Q8IZU2 1322 aa23.62■■□□□ 1.37
SNX17-209ENST00000494893 CRB1P82279 1406 aa23.62■■□□□ 1.37
SNX17-209ENST00000494893 USP35Q9P2H5 1018 aa23.61■■□□□ 1.37
SNX17-209ENST00000494893 BRWD3Q6RI45 1802 aa23.61■■□□□ 1.37
SNX17-209ENST00000494893 RRS1Q15050 365 aaKnown RBP23.6■■□□□ 1.37
SNX17-209ENST00000494893 IP6K1Q92551 441 aa23.59■■□□□ 1.37
SNX17-209ENST00000494893 ERBB3P21860 1342 aa23.59■■□□□ 1.37
SNX17-209ENST00000494893 BARGINQ6ZT62 677 aa23.58■■□□□ 1.37
SNX17-209ENST00000494893 TCP11L2Q8N4U5 519 aa23.58■■□□□ 1.37
SNX17-209ENST00000494893 PEAK1Q9H792 1746 aa23.57■■□□□ 1.36
SNX17-209ENST00000494893 HOXC9P31274 260 aa23.57■■□□□ 1.36
SNX17-209ENST00000494893 BLMP54132 1417 aaPredicted RBP23.57■■□□□ 1.36
SNX17-209ENST00000494893 ANKRD26Q9UPS8 1709 aa23.56■■□□□ 1.36
SNX17-209ENST00000494893 PER1O15534 1290 aaPredicted RBP23.56■■□□□ 1.36
SNX17-209ENST00000494893 TOM1L2Q6ZVM7 507 aa23.56■■□□□ 1.36
SNX17-209ENST00000494893 UPF1Q92900 1129 aaKnown RBP eCLIP23.56■■□□□ 1.36
SNX17-209ENST00000494893 ANKRD24Q8TF21 1146 aa23.55■■□□□ 1.36
SNX17-209ENST00000494893 RTL1A6NKG5 1358 aa23.54■■□□□ 1.36
SNX17-209ENST00000494893 AMER1Q5JTC6 1135 aaPredicted RBP23.54■■□□□ 1.36
SNX17-209ENST00000494893 CARD10Q9BWT7 1032 aa23.54■■□□□ 1.36
SNX17-209ENST00000494893 THRAP3Q9Y2W1 955 aaKnown RBP23.54■■□□□ 1.36
SNX17-209ENST00000494893 A0A0G2JS52 829 aa23.53■■□□□ 1.36
SNX17-209ENST00000494893 CSB-PGBD3P0DP91 1061 aa23.53■■□□□ 1.36
SNX17-209ENST00000494893 AMPHP49418 695 aa23.53■■□□□ 1.36
SNX17-209ENST00000494893 MYT1Q01538 1121 aa23.53■■□□□ 1.36
SNX17-209ENST00000494893 EMILIN1Q9Y6C2 1016 aa23.53■■□□□ 1.36
SNX17-209ENST00000494893 EP400Q96L91 3159 aa23.53■■□□□ 1.36
SNX17-209ENST00000494893 NSD2O96028 1365 aa23.52■■□□□ 1.36
SNX17-209ENST00000494893 DISP2A7MBM2 1401 aa23.52■■□□□ 1.36
SNX17-209ENST00000494893 KRT27Q7Z3Y8 459 aa23.52■■□□□ 1.36
SNX17-209ENST00000494893 KNSTRNQ9Y448 316 aa23.52■■□□□ 1.36
SNX17-209ENST00000494893 WNK3Q9BYP7 1800 aa23.49■■□□□ 1.35
SNX17-209ENST00000494893 HSP90AB2PQ58FF8 381 aa23.49■■□□□ 1.35
SNX17-209ENST00000494893 FAM182BQ5T319 152 aa23.49■■□□□ 1.35
SNX17-209ENST00000494893 LTV1Q96GA3 475 aaPredicted RBP23.49■■□□□ 1.35
SNX17-209ENST00000494893 POLKQ9UBT6 870 aa23.49■■□□□ 1.35
SNX17-209ENST00000494893 PARP4Q9UKK3 1724 aaKnown RBP23.49■■□□□ 1.35
SNX17-209ENST00000494893 TNNT2P45379 298 aaPredicted RBP23.48■■□□□ 1.35
SNX17-209ENST00000494893 NLRP2Q9NX02 1062 aa23.48■■□□□ 1.35
SNX17-209ENST00000494893 FLT4P35916 1363 aa23.48■■□□□ 1.35
SNX17-209ENST00000494893 KIF24Q5T7B8 1368 aa23.48■■□□□ 1.35
SNX17-209ENST00000494893 INSRP06213 1382 aa23.47■■□□□ 1.35
SNX17-209ENST00000494893 LRRC37A3O60309 1634 aa23.47■■□□□ 1.35
SNX17-209ENST00000494893 FAM208AQ9UK61 1670 aaKnown RBP23.44■■□□□ 1.34
SNX17-209ENST00000494893 MORC1Q86VD1 984 aa23.44■■□□□ 1.34
SNX17-209ENST00000494893 SMG6Q86US8 1419 aaKnown RBP23.43■■□□□ 1.34
SNX17-209ENST00000494893 RGPD2P0DJD1 1756 aa23.43■■□□□ 1.34
SNX17-209ENST00000494893 MAP2P11137 1827 aaKnown RBP23.43■■□□□ 1.34
SNX17-209ENST00000494893 NBPF6Q5VWK0 638 aa23.42■■□□□ 1.34
SNX17-209ENST00000494893 NBPF4Q96M43 638 aa23.42■■□□□ 1.34
SNX17-209ENST00000494893 NPC1L1Q9UHC9 1359 aa23.41■■□□□ 1.34
SNX17-209ENST00000494893 PPM1GO15355 546 aaPredicted RBP23.41■■□□□ 1.34
SNX17-209ENST00000494893 CC2D1BQ5T0F9 858 aaKnown RBP23.4■■□□□ 1.34
SNX17-209ENST00000494893 CDCA7Q9BWT1 371 aaPredicted RBP23.4■■□□□ 1.34
SNX17-209ENST00000494893 PDE3BQ13370 1112 aa23.39■■□□□ 1.33
SNX17-209ENST00000494893 DDB1Q16531 1140 aa23.39■■□□□ 1.33
SNX17-209ENST00000494893 USHBP1Q8N6Y0 703 aa23.38■■□□□ 1.33
SNX17-209ENST00000494893 TNS2Q63HR2 1409 aa23.37■■□□□ 1.33
SNX17-209ENST00000494893 IL2RBP14784 551 aa23.37■■□□□ 1.33
SNX17-209ENST00000494893 MARCH10Q8NA82 808 aaPredicted RBP23.37■■□□□ 1.33
SNX17-209ENST00000494893 NCAPD2Q15021 1401 aa23.36■■□□□ 1.33
SNX17-209ENST00000494893 MEGF6O75095 1541 aa23.36■■□□□ 1.33
SNX17-209ENST00000494893 EIF4A2Q14240 407 aaKnown RBP23.34■■□□□ 1.33
SNX17-209ENST00000494893 FAM196AQ6ZSG2 479 aa23.34■■□□□ 1.33
SNX17-209ENST00000494893 EXOC5O00471 708 aa23.33■■□□□ 1.33
SNX17-209ENST00000494893 CNGB1Q14028 1251 aaPredicted RBP23.33■■□□□ 1.33
SNX17-209ENST00000494893 ZNF316A6NFI3 1004 aaPredicted RBP23.32■■□□□ 1.32
SNX17-209ENST00000494893 CCDC125Q86Z20 511 aa23.32■■□□□ 1.32
SNX17-209ENST00000494893 EYA1Q99502 592 aa23.32■■□□□ 1.32
SNX17-209ENST00000494893 OVOS2A0A0G2JMS6 1433 aa23.32■■□□□ 1.32
SNX17-209ENST00000494893 TNS1Q9HBL0 1735 aaKnown RBP23.3■■□□□ 1.32
SNX17-209ENST00000494893 BCL9O00512 1426 aa23.29■■□□□ 1.32
SNX17-209ENST00000494893 TRIM37O94972 964 aa23.29■■□□□ 1.32
SNX17-209ENST00000494893 MTHFSP49914 203 aa23.29■■□□□ 1.32
SNX17-209ENST00000494893 DEFB132Q7Z7B7 95 aa23.29■■□□□ 1.32
SNX17-209ENST00000494893 RGPD1P0DJD0 1748 aa23.28■■□□□ 1.32
SNX17-209ENST00000494893 SHANK3Q9BYB0 1731 aa23.28■■□□□ 1.32
SNX17-209ENST00000494893 PTF1AQ7RTS3 328 aa23.27■■□□□ 1.32
SNX17-209ENST00000494893 IGSF1Q8N6C5 1336 aa23.26■■□□□ 1.31
SNX17-209ENST00000494893 DDX10Q13206 875 aaKnown RBP23.25■■□□□ 1.31
SNX17-209ENST00000494893 IL13P35225 146 aa23.24■■□□□ 1.31
SNX17-209ENST00000494893 ZCRB1Q8TBF4 217 aaKnown RBP23.24■■□□□ 1.31
SNX17-209ENST00000494893 SBF2Q86WG5 1849 aa23.24■■□□□ 1.31
SNX17-209ENST00000494893 COL3A1P02461 1466 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms