RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 SPATA31A1Q5TZJ5 1347 aa28.7■■■□□ 2.19
CCDC12-207ENST00000494655 SEPT12Q8IYM1 358 aa28.7■■■□□ 2.18
CCDC12-207ENST00000494655 RGPD5Q99666 1765 aa28.7■■■□□ 2.18
CCDC12-207ENST00000494655 CRB1P82279 1406 aa28.69■■■□□ 2.18
CCDC12-207ENST00000494655 THSD7AQ9UPZ6 1657 aa28.69■■■□□ 2.18
CCDC12-207ENST00000494655 LARP1Q6PKG0 1096 aaKnown RBP28.68■■■□□ 2.18
CCDC12-207ENST00000494655 USP35Q9P2H5 1018 aa28.68■■■□□ 2.18
CCDC12-207ENST00000494655 ONECUT3O60422 494 aaPredicted RBP28.67■■■□□ 2.18
CCDC12-207ENST00000494655 CSB-PGBD3P0DP91 1061 aa28.65■■■□□ 2.18
CCDC12-207ENST00000494655 CGNL1Q0VF96 1302 aa28.65■■■□□ 2.18
CCDC12-207ENST00000494655 TOM1L2Q6ZVM7 507 aa28.64■■■□□ 2.18
CCDC12-207ENST00000494655 GGNBP2Q9H3C7 697 aa28.64■■■□□ 2.18
CCDC12-207ENST00000494655 WDR17Q8IZU2 1322 aa28.64■■■□□ 2.17
CCDC12-207ENST00000494655 FYB1O15117 783 aa28.63■■■□□ 2.17
CCDC12-207ENST00000494655 TCP11L2Q8N4U5 519 aa28.63■■■□□ 2.17
CCDC12-207ENST00000494655 THRAP3Q9Y2W1 955 aaKnown RBP28.63■■■□□ 2.17
CCDC12-207ENST00000494655 KRT27Q7Z3Y8 459 aa28.62■■■□□ 2.17
CCDC12-207ENST00000494655 UPF1Q92900 1129 aaKnown RBP eCLIP28.62■■■□□ 2.17
CCDC12-207ENST00000494655 WNK3Q9BYP7 1800 aa28.62■■■□□ 2.17
CCDC12-207ENST00000494655 BLMP54132 1417 aaPredicted RBP28.61■■■□□ 2.17
CCDC12-207ENST00000494655 ANKRD26Q9UPS8 1709 aa28.61■■■□□ 2.17
CCDC12-207ENST00000494655 BARGINQ6ZT62 677 aa28.61■■■□□ 2.17
CCDC12-207ENST00000494655 CARD14Q9BXL6 1004 aa28.61■■■□□ 2.17
CCDC12-207ENST00000494655 AXIN2Q9Y2T1 843 aa28.61■■■□□ 2.17
CCDC12-207ENST00000494655 FAM208AQ9UK61 1670 aaKnown RBP28.61■■■□□ 2.17
CCDC12-207ENST00000494655 KIF7Q2M1P5 1343 aa28.58■■■□□ 2.17
CCDC12-207ENST00000494655 RTL1A6NKG5 1358 aa28.58■■■□□ 2.17
CCDC12-207ENST00000494655 PARP4Q9UKK3 1724 aaKnown RBP28.57■■■□□ 2.16
CCDC12-207ENST00000494655 ERBB3P21860 1342 aa28.56■■■□□ 2.16
CCDC12-207ENST00000494655 AMPHP49418 695 aa28.56■■■□□ 2.16
CCDC12-207ENST00000494655 CCDC7Q96M83 1385 aa28.55■■■□□ 2.16
CCDC12-207ENST00000494655 C11orf95C9JLR9 678 aaPredicted RBP28.55■■■□□ 2.16
CCDC12-207ENST00000494655 PANK3Q9H999 370 aa28.55■■■□□ 2.16
CCDC12-207ENST00000494655 MAP3K19Q56UN5 1328 aa28.54■■■□□ 2.16
CCDC12-207ENST00000494655 NSD2O96028 1365 aa28.52■■■□□ 2.16
CCDC12-207ENST00000494655 ANKRD24Q8TF21 1146 aa28.52■■■□□ 2.16
CCDC12-207ENST00000494655 IP6K1Q92551 441 aa28.52■■■□□ 2.16
CCDC12-207ENST00000494655 CARD10Q9BWT7 1032 aa28.52■■■□□ 2.16
CCDC12-207ENST00000494655 SMG6Q86US8 1419 aaKnown RBP28.52■■■□□ 2.16
CCDC12-207ENST00000494655 LRRC37A3O60309 1634 aa28.51■■■□□ 2.15
CCDC12-207ENST00000494655 PDE3BQ13370 1112 aa28.51■■■□□ 2.15
CCDC12-207ENST00000494655 CCDC125Q86Z20 511 aa28.51■■■□□ 2.15
CCDC12-207ENST00000494655 CDCA7Q9BWT1 371 aaPredicted RBP28.51■■■□□ 2.15
CCDC12-207ENST00000494655 NLRP2Q9NX02 1062 aa28.5■■■□□ 2.15
CCDC12-207ENST00000494655 KIF24Q5T7B8 1368 aa28.5■■■□□ 2.15
CCDC12-207ENST00000494655 KNSTRNQ9Y448 316 aa28.49■■■□□ 2.15
CCDC12-207ENST00000494655 HOXC9P31274 260 aa28.48■■■□□ 2.15
CCDC12-207ENST00000494655 SF3B2Q13435 895 aaKnown RBP28.48■■■□□ 2.15
CCDC12-207ENST00000494655 RRS1Q15050 365 aaKnown RBP28.48■■■□□ 2.15
CCDC12-207ENST00000494655 RGPD1P0DJD0 1748 aa28.47■■■□□ 2.15
CCDC12-207ENST00000494655 FLT4P35916 1363 aa28.47■■■□□ 2.15
CCDC12-207ENST00000494655 EP400Q96L91 3159 aa28.46■■■□□ 2.15
CCDC12-207ENST00000494655 LTV1Q96GA3 475 aaPredicted RBP28.45■■■□□ 2.14
CCDC12-207ENST00000494655 FBLN1P23142 703 aa28.44■■■□□ 2.14
CCDC12-207ENST00000494655 DDB1Q16531 1140 aa28.44■■■□□ 2.14
CCDC12-207ENST00000494655 PEAK1Q9H792 1746 aa28.43■■■□□ 2.14
CCDC12-207ENST00000494655 MAP2P11137 1827 aaKnown RBP28.43■■■□□ 2.14
CCDC12-207ENST00000494655 FAM196AQ6ZSG2 479 aa28.41■■■□□ 2.14
CCDC12-207ENST00000494655 DISP2A7MBM2 1401 aa28.41■■■□□ 2.14
CCDC12-207ENST00000494655 WASHC2AQ641Q2 1341 aa28.41■■■□□ 2.14
CCDC12-207ENST00000494655 INSRP06213 1382 aa28.4■■■□□ 2.14
CCDC12-207ENST00000494655 OVOS2A0A0G2JMS6 1433 aa28.4■■■□□ 2.14
CCDC12-207ENST00000494655 PPM1GO15355 546 aaPredicted RBP28.39■■■□□ 2.14
CCDC12-207ENST00000494655 FAM182BQ5T319 152 aa28.39■■■□□ 2.14
CCDC12-207ENST00000494655 TNS2Q63HR2 1409 aa28.39■■■□□ 2.14
CCDC12-207ENST00000494655 RGPD2P0DJD1 1756 aa28.37■■■□□ 2.13
CCDC12-207ENST00000494655 IL2RBP14784 551 aa28.37■■■□□ 2.13
CCDC12-207ENST00000494655 TNNT2P45379 298 aaPredicted RBP28.37■■■□□ 2.13
CCDC12-207ENST00000494655 MORC1Q86VD1 984 aa28.37■■■□□ 2.13
CCDC12-207ENST00000494655 EMILIN1Q9Y6C2 1016 aa28.37■■■□□ 2.13
CCDC12-207ENST00000494655 TNS1Q9HBL0 1735 aaKnown RBP28.35■■■□□ 2.13
CCDC12-207ENST00000494655 EXOC5O00471 708 aa28.35■■■□□ 2.13
CCDC12-207ENST00000494655 HSP90AB2PQ58FF8 381 aa28.33■■■□□ 2.13
CCDC12-207ENST00000494655 BAG6P46379 1132 aa28.32■■■□□ 2.12
CCDC12-207ENST00000494655 ZEB1P37275 1124 aaPredicted RBP28.3■■■□□ 2.12
CCDC12-207ENST00000494655 AMER1Q5JTC6 1135 aaPredicted RBP28.29■■■□□ 2.12
CCDC12-207ENST00000494655 POLKQ9UBT6 870 aa28.29■■■□□ 2.12
CCDC12-207ENST00000494655 TRIM37O94972 964 aa28.27■■■□□ 2.12
CCDC12-207ENST00000494655 RAPGEF4Q8WZA2 1011 aa28.26■■■□□ 2.11
CCDC12-207ENST00000494655 SBF2Q86WG5 1849 aa28.26■■■□□ 2.11
CCDC12-207ENST00000494655 NBPF6Q5VWK0 638 aa28.24■■■□□ 2.11
CCDC12-207ENST00000494655 MARCH10Q8NA82 808 aaPredicted RBP28.24■■■□□ 2.11
CCDC12-207ENST00000494655 NBPF4Q96M43 638 aa28.24■■■□□ 2.11
CCDC12-207ENST00000494655 BCL9O00512 1426 aa28.24■■■□□ 2.11
CCDC12-207ENST00000494655 NPC1L1Q9UHC9 1359 aa28.24■■■□□ 2.11
CCDC12-207ENST00000494655 PER1O15534 1290 aaPredicted RBP28.23■■■□□ 2.11
CCDC12-207ENST00000494655 CC2D1BQ5T0F9 858 aaKnown RBP28.23■■■□□ 2.11
CCDC12-207ENST00000494655 DEFB132Q7Z7B7 95 aa28.23■■■□□ 2.11
CCDC12-207ENST00000494655 MEGF6O75095 1541 aa28.23■■■□□ 2.11
CCDC12-207ENST00000494655 USHBP1Q8N6Y0 703 aa28.22■■■□□ 2.11
CCDC12-207ENST00000494655 TATP17735 454 aaPredicted RBP28.2■■■□□ 2.1
CCDC12-207ENST00000494655 NHSQ6T4R5 1651 aa28.19■■■□□ 2.1
CCDC12-207ENST00000494655 APBA3O96018 575 aa28.19■■■□□ 2.1
CCDC12-207ENST00000494655 PARD3Q8TEW0 1356 aa28.19■■■□□ 2.1
CCDC12-207ENST00000494655 SHANK3Q9BYB0 1731 aa28.18■■■□□ 2.1
CCDC12-207ENST00000494655 RGPD3A6NKT7 1758 aaPredicted RBP28.17■■■□□ 2.1
CCDC12-207ENST00000494655 RGPD4Q7Z3J3 1758 aa28.17■■■□□ 2.1
CCDC12-207ENST00000494655 CNGB1Q14028 1251 aaPredicted RBP28.16■■■□□ 2.1
CCDC12-207ENST00000494655 EIF4A2Q14240 407 aaKnown RBP28.16■■■□□ 2.1
CCDC12-207ENST00000494655 ZCRB1Q8TBF4 217 aaKnown RBP28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms