RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 KCTD15Q96SI1 283 aaPredicted RBP11.1□□□□□ -0.63
NCL-210ENST00000494618 PCDHB9Q9Y5E1 797 aa11.1□□□□□ -0.63
NCL-210ENST00000494618 SMCPP49901 116 aaPredicted RBP11.09□□□□□ -0.63
NCL-210ENST00000494618 WASHC4Q2M389 1173 aa11.09□□□□□ -0.63
NCL-210ENST00000494618 COG6Q9Y2V7 657 aa11.09□□□□□ -0.63
NCL-210ENST00000494618 EIF4G2P78344 907 aaKnown RBP eCLIP11.07□□□□□ -0.64
NCL-210ENST00000494618 CCDC116Q8IYX3 515 aa11.07□□□□□ -0.64
NCL-210ENST00000494618 AAASQ9NRG9 546 aa11.07□□□□□ -0.64
NCL-210ENST00000494618 CAPN5O15484 640 aaPredicted RBP11.06□□□□□ -0.64
NCL-210ENST00000494618 DHX9Q08211 1270 aaKnown RBP11.06□□□□□ -0.64
NCL-210ENST00000494618 IRF5Q13568 498 aa11.06□□□□□ -0.64
NCL-210ENST00000494618 WDR4P57081 412 aaKnown RBP11.05□□□□□ -0.64
NCL-210ENST00000494618 TRIM52Q96A61 297 aa11.05□□□□□ -0.64
NCL-210ENST00000494618 EMILIN1Q9Y6C2 1016 aa11.05□□□□□ -0.64
NCL-210ENST00000494618 ST8SIA5O15466 376 aa11.04□□□□□ -0.64
NCL-210ENST00000494618 NR3C2P08235 984 aa11.04□□□□□ -0.64
NCL-210ENST00000494618 SEPT12Q8IYM1 358 aa11.03□□□□□ -0.64
NCL-210ENST00000494618 POM121Q96HA1 1249 aa11.03□□□□□ -0.64
NCL-210ENST00000494618 PGPEP1Q9NXJ5 209 aa11.03□□□□□ -0.64
NCL-210ENST00000494618 LCE2BO14633 110 aa11.02□□□□□ -0.65
NCL-210ENST00000494618 ZIC2O95409 532 aaPredicted RBP11.02□□□□□ -0.65
NCL-210ENST00000494618 VAC14Q08AM6 782 aa11.02□□□□□ -0.65
NCL-210ENST00000494618 INTS6LQ5JSJ4 861 aaKnown RBP11.02□□□□□ -0.65
NCL-210ENST00000494618 RNF20Q5VTR2 975 aa11.02□□□□□ -0.65
NCL-210ENST00000494618 CCDC125Q86Z20 511 aa11.02□□□□□ -0.65
NCL-210ENST00000494618 TIMP2P16035 220 aa11.01□□□□□ -0.65
NCL-210ENST00000494618 RAB15P59190 212 aa11.01□□□□□ -0.65
NCL-210ENST00000494618 KLF16Q9BXK1 252 aaPredicted RBP11.01□□□□□ -0.65
NCL-210ENST00000494618 ESPNB1AK53 854 aa11□□□□□ -0.65
NCL-210ENST00000494618 SOX11P35716 441 aa11□□□□□ -0.65
NCL-210ENST00000494618 PPP1R26Q5T8A7 1209 aaPredicted RBP11□□□□□ -0.65
NCL-210ENST00000494618 ITPKCQ96DU7 683 aa11□□□□□ -0.65
NCL-210ENST00000494618 GTF3C3Q9Y5Q9 886 aa11□□□□□ -0.65
NCL-210ENST00000494618 GIGYF1O75420 1035 aaPredicted RBP10.99□□□□□ -0.65
NCL-210ENST00000494618 SEMA3FQ13275 785 aa10.98□□□□□ -0.65
NCL-210ENST00000494618 CLUAP1Q96AJ1 413 aa10.97□□□□□ -0.65
NCL-210ENST00000494618 ZFAND3Q9H8U3 227 aa10.97□□□□□ -0.65
NCL-210ENST00000494618 ATP13A2Q9NQ11 1180 aa10.97□□□□□ -0.65
NCL-210ENST00000494618 CEP126Q9P2H0 1117 aa10.97□□□□□ -0.65
NCL-210ENST00000494618 ERVH48-1M5A8F1 160 aa10.96□□□□□ -0.65
NCL-210ENST00000494618 DACH1Q9UI36 760 aa10.96□□□□□ -0.65
NCL-210ENST00000494618 UPP2O95045 317 aa10.95□□□□□ -0.66
NCL-210ENST00000494618 SCARF1Q14162 830 aa10.94□□□□□ -0.66
NCL-210ENST00000494618 SLFNL1Q499Z3 407 aa10.94□□□□□ -0.66
NCL-210ENST00000494618 PROSER2Q86WR7 435 aaPredicted RBP10.94□□□□□ -0.66
NCL-210ENST00000494618 SENP2Q9HC62 589 aa10.94□□□□□ -0.66
NCL-210ENST00000494618 A6NJR5 290 aa10.93□□□□□ -0.66
NCL-210ENST00000494618 ZNF787Q6DD87 383 aa10.93□□□□□ -0.66
NCL-210ENST00000494618 TMPRSS4Q9NRS4 437 aa10.93□□□□□ -0.66
NCL-210ENST00000494618 MRPL14Q6P1L8 145 aaKnown RBP10.92□□□□□ -0.66
NCL-210ENST00000494618 ESF1Q9H501 851 aaKnown RBP10.92□□□□□ -0.66
NCL-210ENST00000494618 BMP1P13497 986 aa10.91□□□□□ -0.66
NCL-210ENST00000494618 ZNF784Q8NCA9 323 aaPredicted RBP10.91□□□□□ -0.66
NCL-210ENST00000494618 KIFC2Q96AC6 838 aa10.91□□□□□ -0.66
NCL-210ENST00000494618 GMPR2Q9P2T1 348 aaKnown RBP10.91□□□□□ -0.66
NCL-210ENST00000494618 Q6ZVU0 165 aa10.9□□□□□ -0.66
NCL-210ENST00000494618 TRIM46Q7Z4K8 759 aa10.9□□□□□ -0.66
NCL-210ENST00000494618 MEIOBQ8N635 442 aa10.9□□□□□ -0.66
NCL-210ENST00000494618 TSEN34Q9BSV6 310 aaKnown RBP10.9□□□□□ -0.66
NCL-210ENST00000494618 PCDHB11Q9Y5F2 797 aa10.9□□□□□ -0.66
NCL-210ENST00000494618 CBLBQ13191 982 aa10.89□□□□□ -0.67
NCL-210ENST00000494618 RNF135Q8IUD6 432 aa10.89□□□□□ -0.67
NCL-210ENST00000494618 ALG2Q9H553 416 aa10.89□□□□□ -0.67
NCL-210ENST00000494618 C11orf95C9JLR9 678 aaPredicted RBP10.88□□□□□ -0.67
NCL-210ENST00000494618 LINC00528Q8N1L1 170 aa10.88□□□□□ -0.67
NCL-210ENST00000494618 FNBP4Q8N3X1 1017 aaPredicted RBP10.88□□□□□ -0.67
NCL-210ENST00000494618 CYLDQ9NQC7 956 aa10.88□□□□□ -0.67
NCL-210ENST00000494618 BMP2P12643 396 aa10.87□□□□□ -0.67
NCL-210ENST00000494618 CC2D2BQ6DHV5 1058 aa10.87□□□□□ -0.67
NCL-210ENST00000494618 ZFP42Q96MM3 310 aa10.87□□□□□ -0.67
NCL-210ENST00000494618 PURBQ96QR8 312 aaKnown RBP10.87□□□□□ -0.67
NCL-210ENST00000494618 LILRA1O75019 489 aa10.86□□□□□ -0.67
NCL-210ENST00000494618 C6orf118Q5T5N4 469 aa10.86□□□□□ -0.67
NCL-210ENST00000494618 PHTF2Q8N3S3 785 aa10.86□□□□□ -0.67
NCL-210ENST00000494618 TRIM47Q96LD4 638 aa10.86□□□□□ -0.67
NCL-210ENST00000494618 POM121CA8CG34 1229 aa10.85□□□□□ -0.67
NCL-210ENST00000494618 POTECB2RU33 542 aa10.85□□□□□ -0.67
NCL-210ENST00000494618 MYCP01106 439 aaPredicted RBP10.85□□□□□ -0.67
NCL-210ENST00000494618 ERVK-9P63128 1117 aa10.85□□□□□ -0.67
NCL-210ENST00000494618 HDGFL1Q5TGJ6 251 aa10.85□□□□□ -0.67
NCL-210ENST00000494618 DOLKQ9UPQ8 538 aa10.85□□□□□ -0.67
NCL-210ENST00000494618 ADH1AP07327 375 aa10.84□□□□□ -0.67
NCL-210ENST00000494618 MAP7D1Q3KQU3 841 aa10.84□□□□□ -0.67
NCL-210ENST00000494618 SIRT1Q96EB6 747 aa10.84□□□□□ -0.67
NCL-210ENST00000494618 CCDC85AQ96PX6 553 aaPredicted RBP10.84□□□□□ -0.67
NCL-210ENST00000494618 ADD1P35611 737 aaKnown RBP10.83□□□□□ -0.68
NCL-210ENST00000494618 USP4Q13107 963 aa10.83□□□□□ -0.68
NCL-210ENST00000494618 RELBQ01201 579 aa10.82□□□□□ -0.68
NCL-210ENST00000494618 AGBL1Q96MI9 1066 aa10.82□□□□□ -0.68
NCL-210ENST00000494618 ATP5J2-PTCD1G3V325 749 aa10.81□□□□□ -0.68
NCL-210ENST00000494618 TRAK2O60296 914 aa10.81□□□□□ -0.68
NCL-210ENST00000494618 CYP2U1Q7Z449 544 aa10.81□□□□□ -0.68
NCL-210ENST00000494618 PLPP7Q8NBV4 271 aa10.81□□□□□ -0.68
NCL-210ENST00000494618 ZMYND15Q9H091 742 aa10.81□□□□□ -0.68
NCL-210ENST00000494618 CHIC2Q9UKJ5 165 aa10.81□□□□□ -0.68
NCL-210ENST00000494618 SPINT1O43278 529 aa10.8□□□□□ -0.68
NCL-210ENST00000494618 PTGIRP43119 386 aa10.8□□□□□ -0.68
NCL-210ENST00000494618 SCTRP47872 440 aa10.8□□□□□ -0.68
NCL-210ENST00000494618 TSGA10IPQ3SY00 556 aa10.8□□□□□ -0.68
NCL-210ENST00000494618 OXLD1Q5BKU9 147 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms