RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TSEN34Q9BSV6 310 aaKnown RBP9.98□□□□□ -0.81
SMC4-224ENST00000494612 RSPH6AQ9H0K4 717 aa9.98□□□□□ -0.81
SMC4-224ENST00000494612 IGHA1P01876 353 aa9.97□□□□□ -0.81
SMC4-224ENST00000494612 GPAT2Q6NUI2 795 aa9.97□□□□□ -0.81
SMC4-224ENST00000494612 SH3BP5LQ7L8J4 393 aa9.97□□□□□ -0.81
SMC4-224ENST00000494612 COL25A1Q9BXS0 654 aaPredicted RBP9.97□□□□□ -0.81
SMC4-224ENST00000494612 POLR3EQ9NVU0 708 aa9.97□□□□□ -0.81
SMC4-224ENST00000494612 DNMT3AQ9Y6K1 912 aaPredicted RBP9.96□□□□□ -0.82
SMC4-224ENST00000494612 TTLL8A6PVC2 850 aa9.95□□□□□ -0.82
SMC4-224ENST00000494612 PTSQ03393 145 aa9.95□□□□□ -0.82
SMC4-224ENST00000494612 HELBQ8NG08 1087 aaPredicted RBP9.95□□□□□ -0.82
SMC4-224ENST00000494612 IRS1P35568 1242 aa9.94□□□□□ -0.82
SMC4-224ENST00000494612 ZNF385CQ66K41 422 aaPredicted RBP9.94□□□□□ -0.82
SMC4-224ENST00000494612 TRMT44Q8IYL2 757 aaKnown RBP9.94□□□□□ -0.82
SMC4-224ENST00000494612 MAP4K5Q9Y4K4 846 aa9.94□□□□□ -0.82
SMC4-224ENST00000494612 FSHRP23945 695 aa9.93□□□□□ -0.82
SMC4-224ENST00000494612 MARSP56192 900 aaKnown RBP9.93□□□□□ -0.82
SMC4-224ENST00000494612 CTDSPL2Q05D32 466 aa9.93□□□□□ -0.82
SMC4-224ENST00000494612 NBPF14Q5TI25 921 aa9.93□□□□□ -0.82
SMC4-224ENST00000494612 NANOS1Q8WY41 292 aaKnown RBP9.93□□□□□ -0.82
SMC4-224ENST00000494612 EMILIN1Q9Y6C2 1016 aa9.93□□□□□ -0.82
SMC4-224ENST00000494612 FOXK2Q01167 660 aa9.92□□□□□ -0.82
SMC4-224ENST00000494612 FBXO31Q5XUX0 539 aaPredicted RBP9.92□□□□□ -0.82
SMC4-224ENST00000494612 KANK3Q6NY19 840 aa9.91□□□□□ -0.82
SMC4-224ENST00000494612 VASH1Q7L8A9 365 aaPredicted RBP9.91□□□□□ -0.82
SMC4-224ENST00000494612 GPKOWQ92917 476 aaPredicted RBP eCLIP9.91□□□□□ -0.821e-13■□□□□ 9.1
SMC4-224ENST00000494612 FIGNL2A6NMB9 653 aa9.9□□□□□ -0.82
SMC4-224ENST00000494612 CCDC155Q8N6L0 562 aa9.9□□□□□ -0.82
SMC4-224ENST00000494612 SKIV2LQ15477 1246 aaKnown RBP9.89□□□□□ -0.83
SMC4-224ENST00000494612 CCDC116Q8IYX3 515 aa9.89□□□□□ -0.83
SMC4-224ENST00000494612 ERFEQ4G0M1 354 aa9.88□□□□□ -0.83
SMC4-224ENST00000494612 RNFT1Q5M7Z0 435 aa9.88□□□□□ -0.83
SMC4-224ENST00000494612 SCARF2Q96GP6 870 aaPredicted RBP9.88□□□□□ -0.83
SMC4-224ENST00000494612 MAGEB6P1A0A0J9YX57 407 aa9.87□□□□□ -0.83
SMC4-224ENST00000494612 SLURP2P0DP57 97 aa9.87□□□□□ -0.83
SMC4-224ENST00000494612 PDXDC2PQ6P474 469 aa9.87□□□□□ -0.83
SMC4-224ENST00000494612 PROCA1Q8NCQ7 364 aaPredicted RBP9.87□□□□□ -0.83
SMC4-224ENST00000494612 LRRN4Q8WUT4 740 aa9.87□□□□□ -0.83
SMC4-224ENST00000494612 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.87□□□□□ -0.83
SMC4-224ENST00000494612 CDC14CA4D256 554 aa9.86□□□□□ -0.83
SMC4-224ENST00000494612 SH3D19Q5HYK7 790 aa9.86□□□□□ -0.83
SMC4-224ENST00000494612 PPP2R2DQ66LE6 453 aa9.86□□□□□ -0.83
SMC4-224ENST00000494612 SV2AQ7L0J3 742 aa9.86□□□□□ -0.83
SMC4-224ENST00000494612 WHAMMQ8TF30 809 aa9.86□□□□□ -0.83
SMC4-224ENST00000494612 ARHGEF15O94989 841 aa9.85□□□□□ -0.83
SMC4-224ENST00000494612 VWA5B2Q8N398 1253 aa9.85□□□□□ -0.83
SMC4-224ENST00000494612 CARD14Q9BXL6 1004 aa9.85□□□□□ -0.83
SMC4-224ENST00000494612 FAM117AQ9C073 453 aa9.85□□□□□ -0.83
SMC4-224ENST00000494612 KDM4CQ9H3R0 1056 aa9.85□□□□□ -0.83
SMC4-224ENST00000494612 PGPEP1Q9NXJ5 209 aa9.85□□□□□ -0.83
SMC4-224ENST00000494612 FKBPLQ9UIM3 349 aa9.85□□□□□ -0.83
SMC4-224ENST00000494612 ITGA6P23229 1130 aa9.84□□□□□ -0.83
SMC4-224ENST00000494612 GPBP1L1Q9HC44 474 aaPredicted RBP9.84□□□□□ -0.83
SMC4-224ENST00000494612 SLC35F4A4IF30 521 aa9.83□□□□□ -0.84
SMC4-224ENST00000494612 SPINT1O43278 529 aa9.82□□□□□ -0.84
SMC4-224ENST00000494612 MAP3K10Q02779 954 aa9.82□□□□□ -0.84
SMC4-224ENST00000494612 OCSTAMPQ9BR26 566 aa9.82□□□□□ -0.84
SMC4-224ENST00000494612 NR6A1Q15406 480 aa9.81□□□□□ -0.84
SMC4-224ENST00000494612 PPP1R26Q5T8A7 1209 aaPredicted RBP9.81□□□□□ -0.84
SMC4-224ENST00000494612 Q6ZVU0 165 aa9.81□□□□□ -0.84
SMC4-224ENST00000494612 DDRGK1Q96HY6 314 aa9.81□□□□□ -0.84
SMC4-224ENST00000494612 ARHGAP9Q9BRR9 750 aa9.81□□□□□ -0.84
SMC4-224ENST00000494612 ZC3H4Q9UPT8 1303 aaKnown RBP9.81□□□□□ -0.84
SMC4-224ENST00000494612 CBLBQ13191 982 aa9.8□□□□□ -0.84
SMC4-224ENST00000494612 KCTD15Q96SI1 283 aaPredicted RBP9.79□□□□□ -0.84
SMC4-224ENST00000494612 ADAMTS2O95450 1211 aa9.78□□□□□ -0.84
SMC4-224ENST00000494612 ENAMQ9NRM1 1142 aa9.78□□□□□ -0.84
SMC4-224ENST00000494612 CDV3Q9UKY7 258 aaKnown RBP9.78□□□□□ -0.84
SMC4-224ENST00000494612 GPSM3Q9Y4H4 160 aa9.77□□□□□ -0.85
SMC4-224ENST00000494612 MSTNO14793 375 aa9.76□□□□□ -0.85
SMC4-224ENST00000494612 DHX9Q08211 1270 aaKnown RBP9.76□□□□□ -0.85
SMC4-224ENST00000494612 XP32Q5T750 250 aa9.76□□□□□ -0.85
SMC4-224ENST00000494612 ZBTB33Q86T24 672 aa9.76□□□□□ -0.85
SMC4-224ENST00000494612 EPS8L1Q8TE68 723 aa9.76□□□□□ -0.85
SMC4-224ENST00000494612 AP1G2O75843 785 aa9.75□□□□□ -0.85
SMC4-224ENST00000494612 PTK2Q05397 1052 aa9.75□□□□□ -0.85
SMC4-224ENST00000494612 SRSF11Q05519 484 aaKnown RBP9.75□□□□□ -0.85
SMC4-224ENST00000494612 LYPD4Q6UWN0 246 aa9.75□□□□□ -0.85
SMC4-224ENST00000494612 SLC10A4Q96EP9 437 aa9.75□□□□□ -0.85
SMC4-224ENST00000494612 POLMQ9NP87 494 aaPredicted RBP9.75□□□□□ -0.85
SMC4-224ENST00000494612 CTSOP43234 321 aaPredicted RBP9.74□□□□□ -0.85
SMC4-224ENST00000494612 INTS6LQ5JSJ4 861 aaKnown RBP9.74□□□□□ -0.85
SMC4-224ENST00000494612 ADAM32Q8TC27 787 aa9.74□□□□□ -0.85
SMC4-224ENST00000494612 HMX1Q9NP08 348 aaPredicted RBP9.74□□□□□ -0.85
SMC4-224ENST00000494612 PHF20L1A8MW92 1017 aa9.73□□□□□ -0.85
SMC4-224ENST00000494612 RELBQ01201 579 aa9.73□□□□□ -0.85
SMC4-224ENST00000494612 AGBL1Q96MI9 1066 aa9.73□□□□□ -0.85
SMC4-224ENST00000494612 INSM2Q96T92 566 aaPredicted RBP9.73□□□□□ -0.85
SMC4-224ENST00000494612 ADAM23O75077 832 aa9.72□□□□□ -0.85
SMC4-224ENST00000494612 CELA2BP08218 269 aaPredicted RBP9.72□□□□□ -0.85
SMC4-224ENST00000494612 USP17L8P0C7I0 530 aa9.7□□□□□ -0.86
SMC4-224ENST00000494612 RFC5P40937 340 aa9.7□□□□□ -0.86
SMC4-224ENST00000494612 PLA2G4EQ3MJ16 856 aa9.7□□□□□ -0.86
SMC4-224ENST00000494612 PODNQ7Z5L7 613 aa9.7□□□□□ -0.86
SMC4-224ENST00000494612 RNF217Q8TC41 542 aa9.7□□□□□ -0.86
SMC4-224ENST00000494612 ATP1B4Q9UN42 357 aaPredicted RBP9.7□□□□□ -0.86
SMC4-224ENST00000494612 SPOCK3Q9BQ16 436 aa9.69□□□□□ -0.86
SMC4-224ENST00000494612 SENP3-EIF4A1A0A087X0R7 540 aa9.68□□□□□ -0.86
SMC4-224ENST00000494612 BEND7Q8N7W2 519 aaPredicted RBP9.68□□□□□ -0.86
SMC4-224ENST00000494612 GALNT6Q8NCL4 622 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms