RNA–Protein interactions for RNA: ENST00000494340.1

LINC02008-202, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 2

Gene LINC02008, Length 524 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-202ENST00000494340 CAMKK2Q96RR4 588 aa13.74□□□□□ -0.21
LINC02008-202ENST00000494340 RREB1Q92766 1687 aa13.74□□□□□ -0.21
LINC02008-202ENST00000494340 LRRC37A3O60309 1634 aa13.74□□□□□ -0.21
LINC02008-202ENST00000494340 CD163L1Q9NR16 1453 aa13.74□□□□□ -0.21
LINC02008-202ENST00000494340 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
LINC02008-202ENST00000494340 OVOS2A0A0J9YW53 1432 aa13.73□□□□□ -0.21
LINC02008-202ENST00000494340 OVOS2Q6IE36 1432 aa13.73□□□□□ -0.21
LINC02008-202ENST00000494340 PEAK1Q9H792 1746 aa13.73□□□□□ -0.21
LINC02008-202ENST00000494340 NINLQ9Y2I6 1382 aa13.73□□□□□ -0.21
LINC02008-202ENST00000494340 TRIM37O94972 964 aa13.73□□□□□ -0.21
LINC02008-202ENST00000494340 RGPD3A6NKT7 1758 aaPredicted RBP13.73□□□□□ -0.21
LINC02008-202ENST00000494340 RGPD4Q7Z3J3 1758 aa13.73□□□□□ -0.21
LINC02008-202ENST00000494340 BCL9O00512 1426 aa13.73□□□□□ -0.21
LINC02008-202ENST00000494340 TRIM26Q12899 539 aaPredicted RBP13.72□□□□□ -0.21
LINC02008-202ENST00000494340 TOM1L2Q6ZVM7 507 aa13.72□□□□□ -0.21
LINC02008-202ENST00000494340 HDGFL2Q7Z4V5 671 aaPredicted RBP13.72□□□□□ -0.21
LINC02008-202ENST00000494340 EDC4Q6P2E9 1401 aaKnown RBP13.72□□□□□ -0.21
LINC02008-202ENST00000494340 RGPD5Q99666 1765 aa13.71□□□□□ -0.21
LINC02008-202ENST00000494340 APBA3O96018 575 aa13.71□□□□□ -0.21
LINC02008-202ENST00000494340 EZH2Q15910 746 aaKnown RBP13.71□□□□□ -0.21
LINC02008-202ENST00000494340 CARD10Q9BWT7 1032 aa13.71□□□□□ -0.21
LINC02008-202ENST00000494340 AXIN2Q9Y2T1 843 aa13.71□□□□□ -0.21
LINC02008-202ENST00000494340 CCDC7Q96M83 1385 aa13.71□□□□□ -0.22
LINC02008-202ENST00000494340 SBF2Q86WG5 1849 aa13.7□□□□□ -0.22
LINC02008-202ENST00000494340 ZBTB7CA1YPR0 619 aa13.7□□□□□ -0.22
LINC02008-202ENST00000494340 DDB1Q16531 1140 aa13.7□□□□□ -0.22
LINC02008-202ENST00000494340 TERF2IPQ9NYB0 399 aa13.7□□□□□ -0.22
LINC02008-202ENST00000494340 NUP188Q5SRE5 1749 aa13.7□□□□□ -0.22
LINC02008-202ENST00000494340 TESK2Q96S53 571 aa13.68□□□□□ -0.22
LINC02008-202ENST00000494340 A0A1W2PP64 1363 aa13.68□□□□□ -0.22
LINC02008-202ENST00000494340 LTN1O94822 1766 aa13.68□□□□□ -0.22
LINC02008-202ENST00000494340 PSDA5PKW4 1024 aaPredicted RBP13.67□□□□□ -0.22
LINC02008-202ENST00000494340 TMC1Q8TDI8 760 aa13.67□□□□□ -0.22
LINC02008-202ENST00000494340 PLSCR1O15162 318 aa13.66□□□□□ -0.22
LINC02008-202ENST00000494340 NBPF14Q5TI25 921 aa13.66□□□□□ -0.22
LINC02008-202ENST00000494340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.66□□□□□ -0.222e-7■■■■□ 21.6
LINC02008-202ENST00000494340 SLC12A5Q9H2X9 1139 aa13.66□□□□□ -0.22
LINC02008-202ENST00000494340 ERBB3P21860 1342 aa13.65□□□□□ -0.22
LINC02008-202ENST00000494340 TNS2Q63HR2 1409 aa13.65□□□□□ -0.22
LINC02008-202ENST00000494340 CSB-PGBD3P0DP91 1061 aa13.65□□□□□ -0.22
LINC02008-202ENST00000494340 R3HDM1Q15032 1099 aaKnown RBP13.65□□□□□ -0.22
LINC02008-202ENST00000494340 NME9Q86XW9 330 aa13.65□□□□□ -0.22
LINC02008-202ENST00000494340 BCL11BQ9C0K0 894 aaPredicted RBP13.65□□□□□ -0.22
LINC02008-202ENST00000494340 FAM208AQ9UK61 1670 aaKnown RBP13.64□□□□□ -0.23
LINC02008-202ENST00000494340 ST20-MTHFSA0A0A6YYL1 179 aa13.64□□□□□ -0.23
LINC02008-202ENST00000494340 SOX12O15370 315 aa13.64□□□□□ -0.23
LINC02008-202ENST00000494340 TIMELESSQ9UNS1 1208 aa13.64□□□□□ -0.23
LINC02008-202ENST00000494340 EXOC5O00471 708 aa13.63□□□□□ -0.23
LINC02008-202ENST00000494340 MARCH10Q8NA82 808 aaPredicted RBP13.63□□□□□ -0.23
LINC02008-202ENST00000494340 ANKRD36BQ8N2N9 1353 aa13.62□□□□□ -0.23
LINC02008-202ENST00000494340 CLSPNQ9HAW4 1339 aa13.62□□□□□ -0.23
LINC02008-202ENST00000494340 USP47Q96K76 1375 aa13.6□□□□□ -0.23
LINC02008-202ENST00000494340 TMF1P82094 1093 aa13.6□□□□□ -0.23
LINC02008-202ENST00000494340 ANKRD24Q8TF21 1146 aa13.6□□□□□ -0.23
LINC02008-202ENST00000494340 IP6K1Q92551 441 aa13.6□□□□□ -0.23
LINC02008-202ENST00000494340 NHSQ6T4R5 1651 aa13.59□□□□□ -0.23
LINC02008-202ENST00000494340 IL2RBP14784 551 aa13.59□□□□□ -0.23
LINC02008-202ENST00000494340 CDCA8Q53HL2 280 aa13.59□□□□□ -0.23
LINC02008-202ENST00000494340 COG3Q96JB2 828 aa13.59□□□□□ -0.23
LINC02008-202ENST00000494340 NLRP2Q9NX02 1062 aa13.58□□□□□ -0.24
LINC02008-202ENST00000494340 RTL1A6NKG5 1358 aa13.58□□□□□ -0.24
LINC02008-202ENST00000494340 CASZ1Q86V15 1759 aa13.55□□□□□ -0.24
LINC02008-202ENST00000494340 HOXC9P31274 260 aa13.54□□□□□ -0.24
LINC02008-202ENST00000494340 PROM2Q8N271 834 aa13.54□□□□□ -0.24
LINC02008-202ENST00000494340 SPON1Q9HCB6 807 aa13.54□□□□□ -0.24
LINC02008-202ENST00000494340 KIF20BQ96Q89 1820 aa13.54□□□□□ -0.24
LINC02008-202ENST00000494340 MAP3K19Q56UN5 1328 aa13.54□□□□□ -0.24
LINC02008-202ENST00000494340 KIF24Q5T7B8 1368 aa13.54□□□□□ -0.24
LINC02008-202ENST00000494340 KCNQ2O43526 872 aa13.53□□□□□ -0.24
LINC02008-202ENST00000494340 TXNRD1Q16881 649 aa13.53□□□□□ -0.24
LINC02008-202ENST00000494340 PTF1AQ7RTS3 328 aa13.53□□□□□ -0.24
LINC02008-202ENST00000494340 FYB1O15117 783 aa13.52□□□□□ -0.25
LINC02008-202ENST00000494340 AMPHP49418 695 aa13.52□□□□□ -0.25
LINC02008-202ENST00000494340 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.25
LINC02008-202ENST00000494340 MYOM1P52179 1685 aa13.52□□□□□ -0.25
LINC02008-202ENST00000494340 BTAF1O14981 1849 aa13.52□□□□□ -0.25
LINC02008-202ENST00000494340 PAPPAQ13219 1627 aa13.51□□□□□ -0.25
LINC02008-202ENST00000494340 CGNL1Q0VF96 1302 aa13.51□□□□□ -0.25
LINC02008-202ENST00000494340 STK32BQ9NY57 414 aa13.51□□□□□ -0.25
LINC02008-202ENST00000494340 SMG6Q86US8 1419 aaKnown RBP13.5□□□□□ -0.25
LINC02008-202ENST00000494340 SLC15A2Q16348 729 aa13.5□□□□□ -0.25
LINC02008-202ENST00000494340 RGPD2P0DJD1 1756 aa13.49□□□□□ -0.25
LINC02008-202ENST00000494340 SHANK3Q9BYB0 1731 aa13.49□□□□□ -0.25
LINC02008-202ENST00000494340 INSRP06213 1382 aa13.48□□□□□ -0.25
LINC02008-202ENST00000494340 LTV1Q96GA3 475 aaPredicted RBP13.48□□□□□ -0.25
LINC02008-202ENST00000494340 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
LINC02008-202ENST00000494340 GGNBP2Q9H3C7 697 aa13.48□□□□□ -0.25
LINC02008-202ENST00000494340 KAT6BQ8WYB5 2073 aa13.48□□□□□ -0.25
LINC02008-202ENST00000494340 QSER1Q2KHR3 1735 aa13.47□□□□□ -0.25
LINC02008-202ENST00000494340 FLT4P35916 1363 aa13.47□□□□□ -0.25
LINC02008-202ENST00000494340 SLC27A3Q5K4L6 730 aa13.47□□□□□ -0.25
LINC02008-202ENST00000494340 PPP1R1BQ9UD71 204 aaPredicted RBP13.47□□□□□ -0.25
LINC02008-202ENST00000494340 ANKRD26Q9UPS8 1709 aa13.47□□□□□ -0.25
LINC02008-202ENST00000494340 MEGF6O75095 1541 aa13.46□□□□□ -0.25
LINC02008-202ENST00000494340 RRS1Q15050 365 aaKnown RBP13.46□□□□□ -0.25
LINC02008-202ENST00000494340 ZCRB1Q8TBF4 217 aaKnown RBP13.46□□□□□ -0.25
LINC02008-202ENST00000494340 NSD3Q9BZ95 1437 aa13.46□□□□□ -0.26
LINC02008-202ENST00000494340 DOT1LQ8TEK3 1739 aa13.45□□□□□ -0.26
LINC02008-202ENST00000494340 FBLN1P23142 703 aa13.45□□□□□ -0.26
LINC02008-202ENST00000494340 CARD14Q9BXL6 1004 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms