RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 PLSCR1O15162 318 aa19.75■□□□□ 0.75
SAMM50-204ENST00000493161 ARHGEF25Q86VW2 580 aa19.75■□□□□ 0.75
SAMM50-204ENST00000493161 PROM2Q8N271 834 aa19.75■□□□□ 0.75
SAMM50-204ENST00000493161 PPP1R1BQ9UD71 204 aaPredicted RBP19.75■□□□□ 0.75
SAMM50-204ENST00000493161 CPSF1Q10570 1443 aaKnown RBP19.75■□□□□ 0.75
SAMM50-204ENST00000493161 TTC21BQ7Z4L5 1316 aa19.75■□□□□ 0.75
SAMM50-204ENST00000493161 EVC2Q86UK5 1308 aa19.75■□□□□ 0.75
SAMM50-204ENST00000493161 WNK3Q9BYP7 1800 aa19.74■□□□□ 0.75
SAMM50-204ENST00000493161 C11orf95C9JLR9 678 aaPredicted RBP19.74■□□□□ 0.75
SAMM50-204ENST00000493161 YY1P25490 414 aa19.74■□□□□ 0.75
SAMM50-204ENST00000493161 BCL11BQ9C0K0 894 aaPredicted RBP19.74■□□□□ 0.75
SAMM50-204ENST00000493161 RGPD5Q99666 1765 aa19.74■□□□□ 0.75
SAMM50-204ENST00000493161 RGPD3A6NKT7 1758 aaPredicted RBP19.73■□□□□ 0.75
SAMM50-204ENST00000493161 RGPD4Q7Z3J3 1758 aa19.73■□□□□ 0.75
SAMM50-204ENST00000493161 SIN3AQ96ST3 1273 aa19.73■□□□□ 0.75
SAMM50-204ENST00000493161 TRPM1Q7Z4N2 1603 aa19.73■□□□□ 0.75
SAMM50-204ENST00000493161 CASZ1Q86V15 1759 aa19.71■□□□□ 0.75
SAMM50-204ENST00000493161 AKAP12Q02952 1782 aa19.7■□□□□ 0.74
SAMM50-204ENST00000493161 CSB-PGBD3P0DP91 1061 aa19.7■□□□□ 0.74
SAMM50-204ENST00000493161 ZNF692Q9BU19 519 aaPredicted RBP19.69■□□□□ 0.74
SAMM50-204ENST00000493161 CARD10Q9BWT7 1032 aa19.69■□□□□ 0.74
SAMM50-204ENST00000493161 NFAT5O94916 1531 aa19.69■□□□□ 0.74
SAMM50-204ENST00000493161 BCL9O00512 1426 aa19.68■□□□□ 0.74
SAMM50-204ENST00000493161 ZBTB7AO95365 584 aa19.68■□□□□ 0.74
SAMM50-204ENST00000493161 KCNH5Q8NCM2 988 aa19.68■□□□□ 0.74
SAMM50-204ENST00000493161 CDCA7Q9BWT1 371 aaPredicted RBP19.68■□□□□ 0.74
SAMM50-204ENST00000493161 NINLQ9Y2I6 1382 aa19.68■□□□□ 0.74
SAMM50-204ENST00000493161 ROCK2O75116 1388 aaKnown RBP19.67■□□□□ 0.74
SAMM50-204ENST00000493161 NEUROD1Q13562 356 aa19.66■□□□□ 0.74
SAMM50-204ENST00000493161 TXNRD1Q16881 649 aa19.66■□□□□ 0.74
SAMM50-204ENST00000493161 TTC21AQ8NDW8 1320 aa19.66■□□□□ 0.74
SAMM50-204ENST00000493161 KTN1Q86UP2 1357 aaKnown RBP19.66■□□□□ 0.74
SAMM50-204ENST00000493161 EXOC5O00471 708 aa19.65■□□□□ 0.74
SAMM50-204ENST00000493161 ATF5Q9Y2D1 282 aaPredicted RBP19.65■□□□□ 0.74
SAMM50-204ENST00000493161 PTGER2P43116 358 aa19.64■□□□□ 0.73
SAMM50-204ENST00000493161 MYOM1P52179 1685 aa19.63■□□□□ 0.73
SAMM50-204ENST00000493161 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.63■□□□□ 0.73
SAMM50-204ENST00000493161 TNS2Q63HR2 1409 aa19.61■□□□□ 0.73
SAMM50-204ENST00000493161 CCDC7Q96M83 1385 aa19.61■□□□□ 0.73
SAMM50-204ENST00000493161 SLC15A2Q16348 729 aa19.61■□□□□ 0.73
SAMM50-204ENST00000493161 NME9Q86XW9 330 aa19.61■□□□□ 0.73
SAMM50-204ENST00000493161 ACSBG1Q96GR2 724 aa19.61■□□□□ 0.73
SAMM50-204ENST00000493161 STK32BQ9NY57 414 aa19.61■□□□□ 0.73
SAMM50-204ENST00000493161 MON2Q7Z3U7 1717 aa19.61■□□□□ 0.73
SAMM50-204ENST00000493161 DCAF8L1A6NGE4 600 aa19.6■□□□□ 0.73
SAMM50-204ENST00000493161 CD163L1Q9NR16 1453 aa19.6■□□□□ 0.73
SAMM50-204ENST00000493161 USP31Q70CQ4 1352 aa19.58■□□□□ 0.73
SAMM50-204ENST00000493161 ABCC6O95255 1503 aa19.58■□□□□ 0.73
SAMM50-204ENST00000493161 NLRP2Q9NX02 1062 aa19.58■□□□□ 0.72
SAMM50-204ENST00000493161 SBNO2Q9Y2G9 1366 aa19.57■□□□□ 0.72
SAMM50-204ENST00000493161 ERBB3P21860 1342 aa19.57■□□□□ 0.72
SAMM50-204ENST00000493161 NHSQ6T4R5 1651 aa19.57■□□□□ 0.72
SAMM50-204ENST00000493161 FHDC1Q9C0D6 1143 aaPredicted RBP19.56■□□□□ 0.72
SAMM50-204ENST00000493161 USP54Q70EL1 1684 aa19.56■□□□□ 0.72
SAMM50-204ENST00000493161 SGIP1Q9BQI5 828 aa19.55■□□□□ 0.72
SAMM50-204ENST00000493161 SYT17Q9BSW7 474 aa19.55■□□□□ 0.72
SAMM50-204ENST00000493161 SLC12A5Q9H2X9 1139 aa19.55■□□□□ 0.72
SAMM50-204ENST00000493161 LTN1O94822 1766 aa19.55■□□□□ 0.72
SAMM50-204ENST00000493161 IL2RBP14784 551 aa19.54■□□□□ 0.72
SAMM50-204ENST00000493161 TMC1Q8TDI8 760 aa19.54■□□□□ 0.72
SAMM50-204ENST00000493161 ANKRD24Q8TF21 1146 aa19.54■□□□□ 0.72
SAMM50-204ENST00000493161 MTFR1LQ9H019 292 aa19.53■□□□□ 0.72
SAMM50-204ENST00000493161 PAPPAQ13219 1627 aa19.53■□□□□ 0.72
SAMM50-204ENST00000493161 ZNF827Q17R98 1081 aa19.52■□□□□ 0.72
SAMM50-204ENST00000493161 CARD11Q9BXL7 1154 aa19.51■□□□□ 0.71
SAMM50-204ENST00000493161 LRRC4BQ9NT99 713 aa19.51■□□□□ 0.71
SAMM50-204ENST00000493161 BTAF1O14981 1849 aa19.51■□□□□ 0.71
SAMM50-204ENST00000493161 UTRNP46939 3433 aa19.49■□□□□ 0.71
SAMM50-204ENST00000493161 A0A1W2PP64 1363 aa19.49■□□□□ 0.71
SAMM50-204ENST00000493161 HDGFL2Q7Z4V5 671 aaPredicted RBP19.49■□□□□ 0.71
SAMM50-204ENST00000493161 EDC4Q6P2E9 1401 aaKnown RBP19.49■□□□□ 0.71
SAMM50-204ENST00000493161 ZNF784Q8NCA9 323 aaPredicted RBP19.48■□□□□ 0.71
SAMM50-204ENST00000493161 LTV1Q96GA3 475 aaPredicted RBP19.47■□□□□ 0.71
SAMM50-204ENST00000493161 ARXQ96QS3 562 aa19.47■□□□□ 0.71
SAMM50-204ENST00000493161 DDX54Q8TDD1 881 aaKnown RBP19.46■□□□□ 0.71
SAMM50-204ENST00000493161 FBLN1P23142 703 aa19.45■□□□□ 0.7
SAMM50-204ENST00000493161 KCNQ4P56696 695 aa19.45■□□□□ 0.7
SAMM50-204ENST00000493161 IP6K1Q92551 441 aa19.45■□□□□ 0.7
SAMM50-204ENST00000493161 AKT1S1Q96B36 256 aa19.44■□□□□ 0.7
SAMM50-204ENST00000493161 TERF2IPQ9NYB0 399 aa19.44■□□□□ 0.7
SAMM50-204ENST00000493161 KAT6BQ8WYB5 2073 aa19.41■□□□□ 0.7
SAMM50-204ENST00000493161 PRIM1P49642 420 aaKnown RBP19.4■□□□□ 0.7
SAMM50-204ENST00000493161 MAP3K19Q56UN5 1328 aa19.4■□□□□ 0.7
SAMM50-204ENST00000493161 PNPLA7Q6ZV29 1317 aa19.4■□□□□ 0.7
SAMM50-204ENST00000493161 MAP3K5Q99683 1374 aa19.4■□□□□ 0.7
SAMM50-204ENST00000493161 HOXC9P31274 260 aa19.39■□□□□ 0.69
SAMM50-204ENST00000493161 SYTL4Q96C24 671 aaPredicted RBP19.39■□□□□ 0.69
SAMM50-204ENST00000493161 TESK2Q96S53 571 aa19.39■□□□□ 0.69
SAMM50-204ENST00000493161 NSD2O96028 1365 aa19.38■□□□□ 0.69
SAMM50-204ENST00000493161 RGPD2P0DJD1 1756 aa19.38■□□□□ 0.69
SAMM50-204ENST00000493161 SLC27A3Q5K4L6 730 aa19.38■□□□□ 0.69
SAMM50-204ENST00000493161 PUS7Q96PZ0 661 aaKnown RBP19.38■□□□□ 0.69
SAMM50-204ENST00000493161 FAM208AQ9UK61 1670 aaKnown RBP19.38■□□□□ 0.69
SAMM50-204ENST00000493161 KLHL34Q8N239 644 aa19.37■□□□□ 0.69
SAMM50-204ENST00000493161 TUBGCP6Q96RT7 1819 aa19.37■□□□□ 0.69
SAMM50-204ENST00000493161 DOT1LQ8TEK3 1739 aa19.37■□□□□ 0.69
SAMM50-204ENST00000493161 SHANK3Q9BYB0 1731 aa19.37■□□□□ 0.69
SAMM50-204ENST00000493161 MEGF6O75095 1541 aa19.36■□□□□ 0.69
SAMM50-204ENST00000493161 ANKRD36BQ8N2N9 1353 aa19.36■□□□□ 0.69
SAMM50-204ENST00000493161 TONSLQ96HA7 1378 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms