RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 MARCH10Q8NA82 808 aaPredicted RBP22.34■■□□□ 1.17
EPHB4-209ENST00000492878 SGIP1Q9BQI5 828 aa22.34■■□□□ 1.17
EPHB4-209ENST00000492878 SYT17Q9BSW7 474 aa22.34■■□□□ 1.17
EPHB4-209ENST00000492878 AKAP12Q02952 1782 aa22.33■■□□□ 1.16
EPHB4-209ENST00000492878 PPIP5K1Q6PFW1 1433 aa22.32■■□□□ 1.16
EPHB4-209ENST00000492878 KIAA1210Q9ULL0 1709 aa22.32■■□□□ 1.16
EPHB4-209ENST00000492878 RAB3GAP2Q9H2M9 1393 aa22.32■■□□□ 1.16
EPHB4-209ENST00000492878 FHDC1Q9C0D6 1143 aaPredicted RBP22.31■■□□□ 1.16
EPHB4-209ENST00000492878 ATF5Q9Y2D1 282 aaPredicted RBP22.31■■□□□ 1.16
EPHB4-209ENST00000492878 SLC15A2Q16348 729 aa22.3■■□□□ 1.16
EPHB4-209ENST00000492878 CDCA7Q9BWT1 371 aaPredicted RBP22.3■■□□□ 1.16
EPHB4-209ENST00000492878 WDR17Q8IZU2 1322 aa22.3■■□□□ 1.16
EPHB4-209ENST00000492878 C1QTNF8P60827 252 aa22.29■■□□□ 1.16
EPHB4-209ENST00000492878 TXNRD1Q16881 649 aa22.29■■□□□ 1.16
EPHB4-209ENST00000492878 MTFR1LQ9H019 292 aa22.29■■□□□ 1.16
EPHB4-209ENST00000492878 USP6P35125 1406 aa22.29■■□□□ 1.16
EPHB4-209ENST00000492878 MAP3K5Q99683 1374 aa22.28■■□□□ 1.16
EPHB4-209ENST00000492878 TOM1L2Q6ZVM7 507 aa22.28■■□□□ 1.16
EPHB4-209ENST00000492878 STK32BQ9NY57 414 aa22.28■■□□□ 1.16
EPHB4-209ENST00000492878 AXIN2Q9Y2T1 843 aa22.28■■□□□ 1.16
EPHB4-209ENST00000492878 PIK3C2AO00443 1686 aa22.27■■□□□ 1.16
EPHB4-209ENST00000492878 SENP3-EIF4A1A0A087X0R7 540 aa22.26■■□□□ 1.15
EPHB4-209ENST00000492878 PAPPAQ13219 1627 aa22.25■■□□□ 1.15
EPHB4-209ENST00000492878 CPSF1Q10570 1443 aaKnown RBP22.24■■□□□ 1.15
EPHB4-209ENST00000492878 NLRP6P59044 892 aa22.24■■□□□ 1.15
EPHB4-209ENST00000492878 CEP350Q5VT06 3117 aa22.23■■□□□ 1.15
EPHB4-209ENST00000492878 NHSQ6T4R5 1651 aa22.23■■□□□ 1.15
EPHB4-209ENST00000492878 TRPM1Q7Z4N2 1603 aa22.22■■□□□ 1.15
EPHB4-209ENST00000492878 ZBTB7CA1YPR0 619 aa22.22■■□□□ 1.15
EPHB4-209ENST00000492878 SRPK2P78362 688 aaKnown RBP22.22■■□□□ 1.15
EPHB4-209ENST00000492878 CARD10Q9BWT7 1032 aa22.22■■□□□ 1.15
EPHB4-209ENST00000492878 CABP2Q9NPB3 220 aa22.22■■□□□ 1.15
EPHB4-209ENST00000492878 GOLGB1Q14789 3259 aaKnown RBP22.21■■□□□ 1.15
EPHB4-209ENST00000492878 RGPD5Q99666 1765 aa22.21■■□□□ 1.15
EPHB4-209ENST00000492878 ARHGEF25Q86VW2 580 aa22.21■■□□□ 1.15
EPHB4-209ENST00000492878 QRICH2Q9H0J4 1663 aa22.2■■□□□ 1.15
EPHB4-209ENST00000492878 NBPF1Q3BBV0 1214 aa22.19■■□□□ 1.14
EPHB4-209ENST00000492878 IFFO2Q5TF58 517 aa22.19■■□□□ 1.14
EPHB4-209ENST00000492878 ARXQ96QS3 562 aa22.19■■□□□ 1.14
EPHB4-209ENST00000492878 CABP1Q9NZU7 370 aa22.19■■□□□ 1.14
EPHB4-209ENST00000492878 TNS2Q63HR2 1409 aa22.19■■□□□ 1.14
EPHB4-209ENST00000492878 CENPJQ9HC77 1338 aaPredicted RBP22.18■■□□□ 1.14
EPHB4-209ENST00000492878 ABCC6O95255 1503 aa22.17■■□□□ 1.14
EPHB4-209ENST00000492878 EXOC5O00471 708 aa22.17■■□□□ 1.14
EPHB4-209ENST00000492878 CCDC7Q96M83 1385 aa22.16■■□□□ 1.14
EPHB4-209ENST00000492878 COL24A1Q17RW2 1714 aa22.16■■□□□ 1.14
EPHB4-209ENST00000492878 NFAT5O94916 1531 aa22.16■■□□□ 1.14
EPHB4-209ENST00000492878 KCNH5Q8NCM2 988 aa22.14■■□□□ 1.13
EPHB4-209ENST00000492878 QSER1Q2KHR3 1735 aa22.11■■□□□ 1.13
EPHB4-209ENST00000492878 TTC21BQ7Z4L5 1316 aa22.11■■□□□ 1.13
EPHB4-209ENST00000492878 BTAF1O14981 1849 aa22.11■■□□□ 1.13
EPHB4-209ENST00000492878 ZNF827Q17R98 1081 aa22.11■■□□□ 1.13
EPHB4-209ENST00000492878 CSB-PGBD3P0DP91 1061 aa22.1■■□□□ 1.13
EPHB4-209ENST00000492878 SHANK3Q9BYB0 1731 aa22.09■■□□□ 1.13
EPHB4-209ENST00000492878 GIGYF1O75420 1035 aaPredicted RBP22.08■■□□□ 1.13
EPHB4-209ENST00000492878 LRRC4BQ9NT99 713 aa22.08■■□□□ 1.13
EPHB4-209ENST00000492878 TTC21AQ8NDW8 1320 aa22.07■■□□□ 1.12
EPHB4-209ENST00000492878 GPR162Q16538 588 aa22.07■■□□□ 1.12
EPHB4-209ENST00000492878 ZNF692Q9BU19 519 aaPredicted RBP22.07■■□□□ 1.12
EPHB4-209ENST00000492878 SLC16A10Q8TF71 515 aa22.06■■□□□ 1.12
EPHB4-209ENST00000492878 AKT1S1Q96B36 256 aa22.06■■□□□ 1.12
EPHB4-209ENST00000492878 ACSBG1Q96GR2 724 aa22.06■■□□□ 1.12
EPHB4-209ENST00000492878 USP54Q70EL1 1684 aa22.04■■□□□ 1.12
EPHB4-209ENST00000492878 ERBB3P21860 1342 aa22.04■■□□□ 1.12
EPHB4-209ENST00000492878 EVC2Q86UK5 1308 aa22.03■■□□□ 1.12
EPHB4-209ENST00000492878 SOX12O15370 315 aa22.02■■□□□ 1.12
EPHB4-209ENST00000492878 TUBGCP6Q96RT7 1819 aa22.01■■□□□ 1.11
EPHB4-209ENST00000492878 USP31Q70CQ4 1352 aa22■■□□□ 1.11
EPHB4-209ENST00000492878 IL2RBP14784 551 aa22■■□□□ 1.11
EPHB4-209ENST00000492878 SLC27A3Q5K4L6 730 aa22■■□□□ 1.11
EPHB4-209ENST00000492878 PNPLA7Q6ZV29 1317 aa22■■□□□ 1.11
EPHB4-209ENST00000492878 MON2Q7Z3U7 1717 aa21.99■■□□□ 1.11
EPHB4-209ENST00000492878 POLD1P28340 1107 aa21.98■■□□□ 1.11
EPHB4-209ENST00000492878 NLGN2Q8NFZ4 835 aa21.98■■□□□ 1.11
EPHB4-209ENST00000492878 NLRP2Q9NX02 1062 aa21.97■■□□□ 1.11
EPHB4-209ENST00000492878 LTN1O94822 1766 aa21.97■■□□□ 1.11
EPHB4-209ENST00000492878 KTN1Q86UP2 1357 aaKnown RBP21.96■■□□□ 1.11
EPHB4-209ENST00000492878 YBX3P16989 372 aaKnown RBP eCLIP21.94■■□□□ 1.16e-7■□□□□ 10.4
EPHB4-209ENST00000492878 LY75O60449 1722 aa21.94■■□□□ 1.1
EPHB4-209ENST00000492878 KAT6BQ8WYB5 2073 aa21.93■■□□□ 1.1
EPHB4-209ENST00000492878 GRIN3BO60391 1043 aa21.92■■□□□ 1.1
EPHB4-209ENST00000492878 KLHL34Q8N239 644 aa21.92■■□□□ 1.1
EPHB4-209ENST00000492878 PELP1Q8IZL8 1130 aaKnown RBP21.91■■□□□ 1.1
EPHB4-209ENST00000492878 ANKRD24Q8TF21 1146 aa21.91■■□□□ 1.1
EPHB4-209ENST00000492878 CD163L1Q9NR16 1453 aa21.9■■□□□ 1.1
EPHB4-209ENST00000492878 SBNO2Q9Y2G9 1366 aa21.9■■□□□ 1.1
EPHB4-209ENST00000492878 TFCP2L1Q9NZI6 479 aa21.9■■□□□ 1.1
EPHB4-209ENST00000492878 ATP10DQ9P241 1426 aa21.89■■□□□ 1.1
EPHB4-209ENST00000492878 NSD2O96028 1365 aa21.89■■□□□ 1.1
EPHB4-209ENST00000492878 FAM208AQ9UK61 1670 aaKnown RBP21.88■■□□□ 1.09
EPHB4-209ENST00000492878 ANKRD36BQ8N2N9 1353 aa21.87■■□□□ 1.09
EPHB4-209ENST00000492878 NME9Q86XW9 330 aa21.87■■□□□ 1.09
EPHB4-209ENST00000492878 ADCY9O60503 1353 aa21.87■■□□□ 1.09
EPHB4-209ENST00000492878 KCNQ4P56696 695 aa21.86■■□□□ 1.09
EPHB4-209ENST00000492878 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.86■■□□□ 1.09
EPHB4-209ENST00000492878 DOT1LQ8TEK3 1739 aa21.86■■□□□ 1.09
EPHB4-209ENST00000492878 L3MBTL2Q969R5 705 aa21.84■■□□□ 1.09
EPHB4-209ENST00000492878 PRIM1P49642 420 aaKnown RBP21.83■■□□□ 1.09
EPHB4-209ENST00000492878 DDX54Q8TDD1 881 aaKnown RBP21.83■■□□□ 1.09
EPHB4-209ENST00000492878 COL23A1Q86Y22 540 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms