RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 IL16Q14005 1332 aa25.27■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 WDR62O43379 1518 aa25.27■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 DDX58O95786 925 aaKnown RBP25.27■■□□□ 1.64
CHKB-CPT1B-203ENST00000492556 MCM5P33992 734 aa25.26■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 THUMPD2Q9BTF0 503 aaKnown RBP25.26■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 ARGLU1Q9NWB6 273 aaPredicted RBP25.26■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 NAT10Q9H0A0 1025 aaKnown RBP25.26■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 BLMP54132 1417 aaPredicted RBP25.25■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 POLR3AO14802 1390 aaPredicted RBP25.25■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 GCC2Q8IWJ2 1684 aa25.24■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 CYP46A1Q9Y6A2 500 aa25.24■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 RLBP1P12271 317 aa25.24■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 EIF2AK4Q9P2K8 1649 aaKnown RBP25.24■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 ZNF330Q9Y3S2 320 aaPredicted RBP25.24■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 LRRFIP1Q32MZ4 808 aaKnown RBP25.23■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 SLC52A1Q9NWF4 448 aa25.23■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 KRT85P78386 507 aa25.22■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 CPLX2Q6PUV4 134 aaKnown RBP25.22■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 MNS1Q8NEH6 495 aa25.22■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 SPINK5Q9NQ38 1064 aaPredicted RBP25.22■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 FBXW7Q969H0 707 aa25.22■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 HIP1O00291 1037 aa25.22■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 CPLX1O14810 134 aa25.21■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 RRAGDQ9NQL2 400 aaPredicted RBP25.21■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 TNNQ9UQP3 1299 aa25.21■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 SMC5Q8IY18 1101 aa25.21■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 SMARCA5O60264 1052 aaPredicted RBP25.2■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 FSD1Q9BTV5 496 aa25.2■■□□□ 1.63
CHKB-CPT1B-203ENST00000492556 TNMDQ9H2S6 317 aa25.2■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 ZSCAN23Q3MJ62 389 aa25.2■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 SDF4Q9BRK5 362 aa25.2■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 FOSBP53539 338 aa25.19■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 CCDC112Q8NEF3 446 aa25.19■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 BCL11BQ9C0K0 894 aaPredicted RBP25.19■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 RAB3GAP1Q15042 981 aa25.18■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 CCDC66A2RUB6 948 aa25.18■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 KINO60870 393 aaKnown RBP25.18■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 CCDC183Q5T5S1 534 aa25.18■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 CREBRFQ8IUR6 639 aa25.18■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 ZSCAN31Q96LW9 406 aaPredicted RBP25.18■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 ZMYND15Q9H091 742 aa25.17■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 TPM1P09493 284 aa25.17■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 EXOC6BQ9Y2D4 811 aa25.17■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 LARP1BQ659C4 914 aaKnown RBP25.17■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 ZNF692Q9BU19 519 aaPredicted RBP25.17■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 SHANK2Q9UPX8 1470 aa25.17■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 MX1P20591 662 aa25.16■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 ERC1Q8IUD2 1116 aa25.16■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 RTEL1-TNFRSF6BF6WH68 1400 aa25.16■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 ANKRD1Q15327 319 aa25.16■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 TTC22Q5TAA0 569 aa25.15■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 PDCL2Q8N4E4 241 aa25.15■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 UPF3BQ9BZI7 483 aaKnown RBP25.15■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 TOMM22Q9NS69 142 aa25.15■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 SYNE3Q6ZMZ3 975 aa25.15■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 MAP4K4O95819 1239 aaPredicted RBP25.15■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 ARHGAP45Q92619 1136 aa25.15■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 TRIM29Q14134 588 aa25.15■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 NUP62CLQ9H1M0 184 aa25.15■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 DYNC1I1O14576 645 aa25.14■■□□□ 1.62
CHKB-CPT1B-203ENST00000492556 RRS1Q15050 365 aaKnown RBP25.14■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 PDRG1Q9NUG6 133 aa25.14■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 RBM27Q9P2N5 1060 aaKnown RBP25.14■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 HOOK1Q9UJC3 728 aaKnown RBP25.14■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 ADGRL2O95490 1459 aa25.13■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 PDIA4P13667 645 aaKnown RBP25.13■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 HDGFL1Q5TGJ6 251 aa25.13■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 LRSAM1Q6UWE0 723 aa25.12■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 C14orf93Q9H972 538 aaKnown RBP25.12■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 IL1RAPL2Q9NP60 686 aa25.12■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 KIF21AQ7Z4S6 1674 aa25.12■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 A0A0U1RQG5 324 aaPredicted RBP25.11■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 NOS1P29475 1434 aa25.11■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 NPC1L1Q9UHC9 1359 aa25.11■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 ZNF608Q9ULD9 1512 aaPredicted RBP25.11■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 RASSF8Q8NHQ8 419 aa25.11■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 JAKMIP1Q96N16 626 aaKnown RBP25.11■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 SAMD9Q5K651 1589 aa25.1■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 USP25Q9UHP3 1055 aa25.1■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 ATP10BO94823 1461 aa25.1■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 MAP3K11Q16584 847 aa25.1■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 TSR1Q2NL82 804 aaKnown RBP25.1■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 DCTN1Q14203 1278 aa25.09■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 CWC27Q6UX04 472 aaKnown RBP25.09■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 SPATA32Q96LK8 384 aa25.09■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 ZNF396Q96N95 335 aaPredicted RBP25.09■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 PPP6R1Q9UPN7 881 aa25.09■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 ANKRD36BQ8N2N9 1353 aa25.09■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 DUOX2Q9NRD8 1548 aa25.09■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 HS1BP3Q53T59 392 aa25.08■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 RIC3Q7Z5B4 369 aa25.08■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 SMC2O95347 1197 aa25.08■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 NLRP6P59044 892 aa25.08■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 RBM42Q9BTD8 480 aaKnown RBP25.08■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 KIAA0556O60303 1618 aa25.08■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 TRDNQ13061 729 aa25.08■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 TTC5Q8N0Z6 440 aa25.08■■□□□ 1.61
CHKB-CPT1B-203ENST00000492556 SRGAP3O43295 1099 aa25.08■■□□□ 1.6
CHKB-CPT1B-203ENST00000492556 CCP110O43303 1012 aa25.08■■□□□ 1.6
CHKB-CPT1B-203ENST00000492556 TXNDC2Q86VQ3 553 aa25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms