RNA–Protein interactions for RNA: ENST00000492536.5

RUSC1-215, Transcript of RUN and SH3 domain containing 1, human

TSL 3

Gene RUSC1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUSC1-215	ENST00000492536	TRIM37	O94972	964 aa		33.34	■■■□□ 2.93
RUSC1-215	ENST00000492536	AXIN2	Q9Y2T1	843 aa		33.34	■■■□□ 2.93
RUSC1-215	ENST00000492536	ABCC6	O95255	1503 aa		33.33	■■■□□ 2.93
RUSC1-215	ENST00000492536	SOX12	O15370	315 aa		33.32	■■■□□ 2.92
RUSC1-215	ENST00000492536	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.32	■■■□□ 2.92
RUSC1-215	ENST00000492536	TERF2IP	Q9NYB0	399 aa		33.32	■■■□□ 2.92
RUSC1-215	ENST00000492536	EDC4	Q6P2E9	1401 aa	Known RBP	33.31	■■■□□ 2.92
RUSC1-215	ENST00000492536	SLC12A5	Q9H2X9	1139 aa		33.31	■■■□□ 2.92
RUSC1-215	ENST00000492536	USP54	Q70EL1	1684 aa		33.31	■■■□□ 2.92
RUSC1-215	ENST00000492536	NINL	Q9Y2I6	1382 aa		33.31	■■■□□ 2.92
RUSC1-215	ENST00000492536	TESK2	Q96S53	571 aa		33.3	■■■□□ 2.92
RUSC1-215	ENST00000492536	PARD3	Q8TEW0	1356 aa		33.3	■■■□□ 2.92
RUSC1-215	ENST00000492536	ST20-MTHFS	A0A0A6YYL1	179 aa		33.28	■■■□□ 2.92
RUSC1-215	ENST00000492536	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.28	■■■□□ 2.92
RUSC1-215	ENST00000492536		A0A1W2PP64	1363 aa		33.27	■■■□□ 2.92
RUSC1-215	ENST00000492536	APBA3	O96018	575 aa		33.26	■■■□□ 2.91
RUSC1-215	ENST00000492536	NME9	Q86XW9	330 aa		33.26	■■■□□ 2.91
RUSC1-215	ENST00000492536	CSB-PGBD3	P0DP91	1061 aa		33.25	■■■□□ 2.91
RUSC1-215	ENST00000492536	EZH2	Q15910	746 aa	Known RBP	33.25	■■■□□ 2.91
RUSC1-215	ENST00000492536	DDB1	Q16531	1140 aa		33.25	■■■□□ 2.91
RUSC1-215	ENST00000492536	CAMKK2	Q96RR4	588 aa		33.25	■■■□□ 2.91
RUSC1-215	ENST00000492536	CARD10	Q9BWT7	1032 aa		33.25	■■■□□ 2.91
RUSC1-215	ENST00000492536	OVOS2	A0A0G2JMS6	1433 aa		33.25	■■■□□ 2.91
RUSC1-215	ENST00000492536	OVOS2	A0A0J9YW53	1432 aa		33.25	■■■□□ 2.91
RUSC1-215	ENST00000492536	OVOS2	Q6IE36	1432 aa		33.25	■■■□□ 2.91
RUSC1-215	ENST00000492536	LRRC37A3	O60309	1634 aa		33.24	■■■□□ 2.91
RUSC1-215	ENST00000492536	RGPD5	Q99666	1765 aa		33.21	■■■□□ 2.91
RUSC1-215	ENST00000492536	WNK3	Q9BYP7	1800 aa		33.21	■■■□□ 2.91
RUSC1-215	ENST00000492536	PSD	A5PKW4	1024 aa	Predicted RBP	33.2	■■■□□ 2.91
RUSC1-215	ENST00000492536	CCDC7	Q96M83	1385 aa		33.2	■■■□□ 2.9
RUSC1-215	ENST00000492536	PEAK1	Q9H792	1746 aa		33.19	■■■□□ 2.9
RUSC1-215	ENST00000492536	LRP5	O75197	1615 aa		33.18	■■■□□ 2.9
RUSC1-215	ENST00000492536	USP47	Q96K76	1375 aa		33.17	■■■□□ 2.9
RUSC1-215	ENST00000492536	TIMELESS	Q9UNS1	1208 aa		33.16	■■■□□ 2.9
RUSC1-215	ENST00000492536	ERBB3	P21860	1342 aa		33.15	■■■□□ 2.9
RUSC1-215	ENST00000492536	CLSPN	Q9HAW4	1339 aa		33.15	■■■□□ 2.9
RUSC1-215	ENST00000492536	BCL9	O00512	1426 aa		33.14	■■■□□ 2.9
RUSC1-215	ENST00000492536	R3HDM1	Q15032	1099 aa	Known RBP	33.14	■■■□□ 2.9
RUSC1-215	ENST00000492536	TMF1	P82094	1093 aa		33.13	■■■□□ 2.89
RUSC1-215	ENST00000492536	RREB1	Q92766	1687 aa		33.13	■■■□□ 2.89
RUSC1-215	ENST00000492536	LTN1	O94822	1766 aa		33.12	■■■□□ 2.89
RUSC1-215	ENST00000492536	ANKRD36B	Q8N2N9	1353 aa		33.1	■■■□□ 2.89
RUSC1-215	ENST00000492536	EXOC5	O00471	708 aa		33.09	■■■□□ 2.89
RUSC1-215	ENST00000492536	MARCH10	Q8NA82	808 aa	Predicted RBP	33.09	■■■□□ 2.89
RUSC1-215	ENST00000492536	COG3	Q96JB2	828 aa		33.07	■■■□□ 2.88
RUSC1-215	ENST00000492536	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.07	■■■□□ 2.88
RUSC1-215	ENST00000492536	TNS2	Q63HR2	1409 aa		33.07	■■■□□ 2.88
RUSC1-215	ENST00000492536	SBF2	Q86WG5	1849 aa		33.07	■■■□□ 2.88
RUSC1-215	ENST00000492536	NUP188	Q5SRE5	1749 aa		33.06	■■■□□ 2.88
RUSC1-215	ENST00000492536	CDCA8	Q53HL2	280 aa		33.06	■■■□□ 2.88
RUSC1-215	ENST00000492536	NBPF14	Q5TI25	921 aa		33.06	■■■□□ 2.88
RUSC1-215	ENST00000492536	NLRP2	Q9NX02	1062 aa		33.06	■■■□□ 2.88
RUSC1-215	ENST00000492536	PLSCR1	O15162	318 aa		33.05	■■■□□ 2.88
RUSC1-215	ENST00000492536	ANKRD24	Q8TF21	1146 aa		33.05	■■■□□ 2.88
RUSC1-215	ENST00000492536	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.05	■■■□□ 2.88
RUSC1-215	ENST00000492536	RGPD4	Q7Z3J3	1758 aa		33.05	■■■□□ 2.88
RUSC1-215	ENST00000492536	IP6K1	Q92551	441 aa		33.03	■■■□□ 2.88
RUSC1-215	ENST00000492536	IL2RB	P14784	551 aa		33	■■■□□ 2.87
RUSC1-215	ENST00000492536	PCGF6	Q9BYE7	350 aa		33	■■■□□ 2.87
RUSC1-215	ENST00000492536	FAM208A	Q9UK61	1670 aa	Known RBP	32.96	■■■□□ 2.87
RUSC1-215	ENST00000492536	MAP3K19	Q56UN5	1328 aa		32.95	■■■□□ 2.86
RUSC1-215	ENST00000492536	PTF1A	Q7RTS3	328 aa		32.93	■■■□□ 2.86
RUSC1-215	ENST00000492536	FYB1	O15117	783 aa		32.92	■■■□□ 2.86
RUSC1-215	ENST00000492536	HOXC9	P31274	260 aa		32.91	■■■□□ 2.86
RUSC1-215	ENST00000492536	AMPH	P49418	695 aa		32.91	■■■□□ 2.86
RUSC1-215	ENST00000492536	RTL1	A6NKG5	1358 aa		32.91	■■■□□ 2.86
RUSC1-215	ENST00000492536	LTV1	Q96GA3	475 aa	Predicted RBP	32.88	■■■□□ 2.85
RUSC1-215	ENST00000492536	GGNBP2	Q9H3C7	697 aa		32.88	■■■□□ 2.85
RUSC1-215	ENST00000492536	NHS	Q6T4R5	1651 aa		32.87	■■■□□ 2.85
RUSC1-215	ENST00000492536	FBLN1	P23142	703 aa		32.84	■■■□□ 2.85
RUSC1-215	ENST00000492536	PROM2	Q8N271	834 aa		32.84	■■■□□ 2.85
RUSC1-215	ENST00000492536	KCNQ2	O43526	872 aa		32.83	■■■□□ 2.85
RUSC1-215	ENST00000492536	MYOM1	P52179	1685 aa		32.82	■■■□□ 2.84
RUSC1-215	ENST00000492536	KIF20B	Q96Q89	1820 aa		32.82	■■■□□ 2.84
RUSC1-215	ENST00000492536	RRS1	Q15050	365 aa	Known RBP	32.82	■■■□□ 2.84
RUSC1-215	ENST00000492536	TXNRD1	Q16881	649 aa		32.82	■■■□□ 2.84
RUSC1-215	ENST00000492536	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.81	■■■□□ 2.84
RUSC1-215	ENST00000492536	ACSBG1	Q96GR2	724 aa		32.8	■■■□□ 2.84
RUSC1-215	ENST00000492536	KIF24	Q5T7B8	1368 aa		32.8	■■■□□ 2.84
RUSC1-215	ENST00000492536	SMG6	Q86US8	1419 aa	Known RBP	32.79	■■■□□ 2.84
RUSC1-215	ENST00000492536	SPON1	Q9HCB6	807 aa		32.78	■■■□□ 2.84
RUSC1-215	ENST00000492536	NSD3	Q9BZ95	1437 aa		32.77	■■■□□ 2.84
RUSC1-215	ENST00000492536	CARD14	Q9BXL6	1004 aa		32.77	■■■□□ 2.84
RUSC1-215	ENST00000492536	CCER1	Q8TC90	406 aa	Predicted RBP	32.75	■■■□□ 2.83
RUSC1-215	ENST00000492536	DDX54	Q8TDD1	881 aa	Known RBP	32.75	■■■□□ 2.83
RUSC1-215	ENST00000492536	INSR	P06213	1382 aa		32.74	■■■□□ 2.83
RUSC1-215	ENST00000492536	FLT4	P35916	1363 aa		32.74	■■■□□ 2.83
RUSC1-215	ENST00000492536	STK32B	Q9NY57	414 aa		32.74	■■■□□ 2.83
RUSC1-215	ENST00000492536	CGNL1	Q0VF96	1302 aa		32.73	■■■□□ 2.83
RUSC1-215	ENST00000492536	NBPF6	Q5VWK0	638 aa		32.71	■■■□□ 2.83
RUSC1-215	ENST00000492536	ZCRB1	Q8TBF4	217 aa	Known RBP	32.71	■■■□□ 2.83
RUSC1-215	ENST00000492536	NBPF4	Q96M43	638 aa		32.71	■■■□□ 2.83
RUSC1-215	ENST00000492536	BTAF1	O14981	1849 aa		32.71	■■■□□ 2.83
RUSC1-215	ENST00000492536	MEGF6	O75095	1541 aa		32.71	■■■□□ 2.83
RUSC1-215	ENST00000492536	RGPD2	P0DJD1	1756 aa		32.7	■■■□□ 2.83
RUSC1-215	ENST00000492536	CASZ1	Q86V15	1759 aa		32.7	■■■□□ 2.83
RUSC1-215	ENST00000492536	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.7	■■■□□ 2.83
RUSC1-215	ENST00000492536	SLC15A2	Q16348	729 aa		32.69	■■■□□ 2.82
RUSC1-215	ENST00000492536	HSP90AB2P	Q58FF8	381 aa		32.68	■■■□□ 2.82
RUSC1-215	ENST00000492536	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.68	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms