RNA–Protein interactions for RNA: ENST00000492348.6

RBBP4-214, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 1,547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-214ENST00000492348 MAMSTRQ6ZN01 415 aa9.6□□□□□ -0.87
RBBP4-214ENST00000492348 PNISRQ8TF01 805 aaKnown RBP9.6□□□□□ -0.87
RBBP4-214ENST00000492348 ESF1Q9H501 851 aaKnown RBP9.6□□□□□ -0.87
RBBP4-214ENST00000492348 ZBED9Q6R2W3 1325 aa9.6□□□□□ -0.87
RBBP4-214ENST00000492348 ADAMTS13Q76LX8 1427 aa9.6□□□□□ -0.87
RBBP4-214ENST00000492348 MED14O60244 1454 aa9.59□□□□□ -0.87
RBBP4-214ENST00000492348 CD163L1Q9NR16 1453 aa9.59□□□□□ -0.87
RBBP4-214ENST00000492348 NSD3Q9BZ95 1437 aa9.59□□□□□ -0.87
RBBP4-214ENST00000492348 NLRP13Q86W25 1043 aa9.59□□□□□ -0.87
RBBP4-214ENST00000492348 OTUD5Q96G74 571 aa9.59□□□□□ -0.87
RBBP4-214ENST00000492348 SCUBE2Q9NQ36 999 aa9.59□□□□□ -0.87
RBBP4-214ENST00000492348 RGPD8O14715 1765 aaPredicted RBP9.58□□□□□ -0.88
RBBP4-214ENST00000492348 DPYSL4O14531 572 aa9.58□□□□□ -0.88
RBBP4-214ENST00000492348 NRKQ7Z2Y5 1582 aa9.58□□□□□ -0.88
RBBP4-214ENST00000492348 METP08581 1390 aa9.57□□□□□ -0.88
RBBP4-214ENST00000492348 PLEKHH1Q9ULM0 1364 aa9.57□□□□□ -0.88
RBBP4-214ENST00000492348 CARD14Q9BXL6 1004 aa9.57□□□□□ -0.88
RBBP4-214ENST00000492348 CHD2O14647 1828 aaKnown RBP9.57□□□□□ -0.88
RBBP4-214ENST00000492348 PLEKHG1Q9ULL1 1385 aa9.57□□□□□ -0.88
RBBP4-214ENST00000492348 EVC2Q86UK5 1308 aa9.57□□□□□ -0.88
RBBP4-214ENST00000492348 SEMA3EO15041 775 aa9.56□□□□□ -0.88
RBBP4-214ENST00000492348 STK26Q9P289 416 aa9.56□□□□□ -0.88
RBBP4-214ENST00000492348 SETD1BQ9UPS6 1966 aaKnown RBP9.56□□□□□ -0.88
RBBP4-214ENST00000492348 INSRP06213 1382 aa9.56□□□□□ -0.88
RBBP4-214ENST00000492348 ANKRD36BQ8N2N9 1353 aa9.56□□□□□ -0.88
RBBP4-214ENST00000492348 ABCC11Q96J66 1382 aa9.56□□□□□ -0.88
RBBP4-214ENST00000492348 CDC42BPGQ6DT37 1551 aa9.56□□□□□ -0.88
RBBP4-214ENST00000492348 CEBPAP49715 358 aaPredicted RBP9.56□□□□□ -0.88
RBBP4-214ENST00000492348 MAP3K9P80192 1104 aa9.56□□□□□ -0.88
RBBP4-214ENST00000492348 TMC1Q8TDI8 760 aa9.56□□□□□ -0.88
RBBP4-214ENST00000492348 PUS7Q96PZ0 661 aaKnown RBP9.56□□□□□ -0.88
RBBP4-214ENST00000492348 KNSTRNQ9Y448 316 aa9.56□□□□□ -0.88
RBBP4-214ENST00000492348 NINLQ9Y2I6 1382 aa9.55□□□□□ -0.88
RBBP4-214ENST00000492348 SPDYE16A6NNV3 312 aaPredicted RBP9.55□□□□□ -0.88
RBBP4-214ENST00000492348 SLAIN1Q8ND83 568 aa9.55□□□□□ -0.88
RBBP4-214ENST00000492348 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.55□□□□□ -0.88
RBBP4-214ENST00000492348 OXER1Q8TDS5 423 aa9.55□□□□□ -0.88
RBBP4-214ENST00000492348 UPF1Q92900 1129 aaKnown RBP eCLIP9.55□□□□□ -0.88
RBBP4-214ENST00000492348 PRAM1Q96QH2 718 aa9.55□□□□□ -0.88
RBBP4-214ENST00000492348 FAM135BQ49AJ0 1406 aa9.55□□□□□ -0.88
RBBP4-214ENST00000492348 MAP2P11137 1827 aaKnown RBP9.54□□□□□ -0.88
RBBP4-214ENST00000492348 A0A1W2PP64 1363 aa9.54□□□□□ -0.88
RBBP4-214ENST00000492348 MINK1Q8N4C8 1332 aaPredicted RBP9.54□□□□□ -0.88
RBBP4-214ENST00000492348 NALCNQ8IZF0 1738 aa9.54□□□□□ -0.88
RBBP4-214ENST00000492348 ATP7BP35670 1465 aa9.54□□□□□ -0.88
RBBP4-214ENST00000492348 TESPA1A2RU30 521 aaPredicted RBP9.54□□□□□ -0.88
RBBP4-214ENST00000492348 PPP2R1AP30153 589 aa9.54□□□□□ -0.88
RBBP4-214ENST00000492348 SAFB2Q14151 953 aaKnown RBP eCLIP9.54□□□□□ -0.88
RBBP4-214ENST00000492348 ATAD2Q6PL18 1390 aa9.54□□□□□ -0.88
RBBP4-214ENST00000492348 TULP1O00294 542 aaPredicted RBP9.53□□□□□ -0.88
RBBP4-214ENST00000492348 SLC34A2O95436 690 aa9.53□□□□□ -0.88
RBBP4-214ENST00000492348 PDIA6Q15084 440 aa9.53□□□□□ -0.88
RBBP4-214ENST00000492348 SLC12A5Q9H2X9 1139 aa9.53□□□□□ -0.88
RBBP4-214ENST00000492348 SMG6Q86US8 1419 aaKnown RBP9.53□□□□□ -0.88
RBBP4-214ENST00000492348 PTPRUQ92729 1446 aa9.53□□□□□ -0.88
RBBP4-214ENST00000492348 FMN2Q9NZ56 1722 aa9.53□□□□□ -0.88
RBBP4-214ENST00000492348 PTCD2Q8WV60 388 aaKnown RBP9.52□□□□□ -0.88
RBBP4-214ENST00000492348 SUPT16HQ9Y5B9 1047 aaKnown RBP9.52□□□□□ -0.88
RBBP4-214ENST00000492348 TBC1D12O60347 775 aa9.51□□□□□ -0.89
RBBP4-214ENST00000492348 LTKP29376 864 aa9.51□□□□□ -0.89
RBBP4-214ENST00000492348 NSD2O96028 1365 aa9.51□□□□□ -0.89
RBBP4-214ENST00000492348 ROBO2Q9HCK4 1378 aa9.51□□□□□ -0.89
RBBP4-214ENST00000492348 MARF1Q9Y4F3 1742 aaKnown RBP9.51□□□□□ -0.89
RBBP4-214ENST00000492348 PTCH1Q13635 1447 aa9.51□□□□□ -0.89
RBBP4-214ENST00000492348 SMYD5Q6GMV2 418 aa9.51□□□□□ -0.89
RBBP4-214ENST00000492348 POGKQ9P215 609 aa9.51□□□□□ -0.89
RBBP4-214ENST00000492348 COL3A1P02461 1466 aaPredicted RBP9.5□□□□□ -0.89
RBBP4-214ENST00000492348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.5□□□□□ -0.89
RBBP4-214ENST00000492348 TPRNQ4KMQ1 711 aa9.49□□□□□ -0.89
RBBP4-214ENST00000492348 WAPLQ7Z5K2 1190 aa9.49□□□□□ -0.89
RBBP4-214ENST00000492348 NKTRP30414 1462 aaKnown RBP9.49□□□□□ -0.89
RBBP4-214ENST00000492348 IQSEC2Q5JU85 1478 aa9.49□□□□□ -0.89
RBBP4-214ENST00000492348 USP54Q70EL1 1684 aa9.48□□□□□ -0.89
RBBP4-214ENST00000492348 POLR3AO14802 1390 aaPredicted RBP9.48□□□□□ -0.89
RBBP4-214ENST00000492348 SENP3-EIF4A1A0A087X0R7 540 aa9.48□□□□□ -0.89
RBBP4-214ENST00000492348 SRPK2P78362 688 aaKnown RBP9.48□□□□□ -0.89
RBBP4-214ENST00000492348 FBXO41Q8TF61 875 aa9.48□□□□□ -0.89
RBBP4-214ENST00000492348 CGNL1Q0VF96 1302 aa9.48□□□□□ -0.89
RBBP4-214ENST00000492348 NWD1Q149M9 1564 aa9.48□□□□□ -0.89
RBBP4-214ENST00000492348 LMOD2Q6P5Q4 547 aa9.47□□□□□ -0.89
RBBP4-214ENST00000492348 SIRT1Q96EB6 747 aa9.47□□□□□ -0.89
RBBP4-214ENST00000492348 CDK19Q9BWU1 502 aa9.47□□□□□ -0.89
RBBP4-214ENST00000492348 CPSF1Q10570 1443 aaKnown RBP9.47□□□□□ -0.89
RBBP4-214ENST00000492348 PPIP5K1Q6PFW1 1433 aa9.47□□□□□ -0.89
RBBP4-214ENST00000492348 EVI5O60447 810 aa9.46□□□□□ -0.89
RBBP4-214ENST00000492348 MLLT3P42568 568 aaPredicted RBP9.46□□□□□ -0.89
RBBP4-214ENST00000492348 HDGFP51858 240 aaKnown RBP9.46□□□□□ -0.89
RBBP4-214ENST00000492348 DOK7Q18PE1 504 aa9.46□□□□□ -0.89
RBBP4-214ENST00000492348 TXNDC2Q86VQ3 553 aa9.46□□□□□ -0.89
RBBP4-214ENST00000492348 LMTK3Q96Q04 1460 aa9.46□□□□□ -0.9
RBBP4-214ENST00000492348 PRKCSHP14314 528 aaPredicted RBP9.46□□□□□ -0.9
RBBP4-214ENST00000492348 NUDCQ9Y266 331 aa9.46□□□□□ -0.9
RBBP4-214ENST00000492348 PCDHGA4Q9Y5G9 962 aa9.46□□□□□ -0.9
RBBP4-214ENST00000492348 DLG5Q8TDM6 1919 aa9.45□□□□□ -0.9
RBBP4-214ENST00000492348 PIK3C2AO00443 1686 aa9.45□□□□□ -0.9
RBBP4-214ENST00000492348 PRR36Q9H6K5 1346 aa9.45□□□□□ -0.9
RBBP4-214ENST00000492348 STRCP1A6NGW2 1772 aa9.44□□□□□ -0.9
RBBP4-214ENST00000492348 EDC4Q6P2E9 1401 aaKnown RBP9.44□□□□□ -0.9
RBBP4-214ENST00000492348 WASLO00401 505 aaPredicted RBP9.44□□□□□ -0.9
RBBP4-214ENST00000492348 HOXB3P14651 431 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms