RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 HSP90AB2PQ58FF8 381 aa15.83■□□□□ 0.12
HMGN1-220ENST00000492280 SULT6B1Q6IMI4 303 aa15.83■□□□□ 0.12
HMGN1-220ENST00000492280 C8orf58Q8NAV2 365 aa15.83■□□□□ 0.12
HMGN1-220ENST00000492280 SLKQ9H2G2 1235 aaPredicted RBP15.83■□□□□ 0.12
HMGN1-220ENST00000492280 ITSN1Q15811 1721 aa15.83■□□□□ 0.12
HMGN1-220ENST00000492280 DDX19BQ9UMR2 479 aa15.82■□□□□ 0.12
HMGN1-220ENST00000492280 MON2Q7Z3U7 1717 aa15.82■□□□□ 0.12
HMGN1-220ENST00000492280 IL16Q14005 1332 aa15.82■□□□□ 0.12
HMGN1-220ENST00000492280 NUTM2GQ5VZR2 741 aa15.82■□□□□ 0.12
HMGN1-220ENST00000492280 SPRYD3Q8NCJ5 442 aa15.82■□□□□ 0.12
HMGN1-220ENST00000492280 RBM33Q96EV2 1170 aaKnown RBP15.82■□□□□ 0.12
HMGN1-220ENST00000492280 PTPRUQ92729 1446 aa15.82■□□□□ 0.12
HMGN1-220ENST00000492280 EIF4A2Q14240 407 aaKnown RBP15.81■□□□□ 0.12
HMGN1-220ENST00000492280 NFKBIBQ15653 356 aa15.81■□□□□ 0.12
HMGN1-220ENST00000492280 MCM10Q7L590 875 aa15.81■□□□□ 0.12
HMGN1-220ENST00000492280 LNPKQ9C0E8 428 aa15.81■□□□□ 0.12
HMGN1-220ENST00000492280 VAMP4O75379 141 aa15.81■□□□□ 0.12
HMGN1-220ENST00000492280 PNNQ9H307 717 aaKnown RBP15.81■□□□□ 0.12
HMGN1-220ENST00000492280 CDK12Q9NYV4 1490 aaPredicted RBP15.81■□□□□ 0.12
HMGN1-220ENST00000492280 C3P01024 1663 aa15.81■□□□□ 0.12
HMGN1-220ENST00000492280 CT47B1P0C2W7 299 aaPredicted RBP15.81■□□□□ 0.12
HMGN1-220ENST00000492280 TTC21BQ7Z4L5 1316 aa15.8■□□□□ 0.12
HMGN1-220ENST00000492280 KIF16BQ96L93 1317 aa15.8■□□□□ 0.12
HMGN1-220ENST00000492280 ZBTB40Q9NUA8 1239 aa15.8■□□□□ 0.12
HMGN1-220ENST00000492280 MFAP1P55081 439 aaKnown RBP15.8■□□□□ 0.12
HMGN1-220ENST00000492280 AKAP12Q02952 1782 aa15.79■□□□□ 0.12
HMGN1-220ENST00000492280 MIS18AQ9NYP9 233 aa15.79■□□□□ 0.12
HMGN1-220ENST00000492280 KNDC1Q76NI1 1749 aa15.79■□□□□ 0.12
HMGN1-220ENST00000492280 TECPR2O15040 1411 aa15.79■□□□□ 0.12
HMGN1-220ENST00000492280 PLEKHG5O94827 1062 aa15.79■□□□□ 0.12
HMGN1-220ENST00000492280 TWISTNBQ3B726 338 aaPredicted RBP15.79■□□□□ 0.12
HMGN1-220ENST00000492280 NCBP3Q53F19 620 aaKnown RBP15.79■□□□□ 0.12
HMGN1-220ENST00000492280 AMOTL2Q9Y2J4 779 aa15.79■□□□□ 0.12
HMGN1-220ENST00000492280 FOXO3O43524 673 aa15.78■□□□□ 0.12
HMGN1-220ENST00000492280 FRAT2O75474 233 aaPredicted RBP15.78■□□□□ 0.12
HMGN1-220ENST00000492280 MRPL50Q8N5N7 158 aaKnown RBP15.78■□□□□ 0.12
HMGN1-220ENST00000492280 RGPD8O14715 1765 aaPredicted RBP15.77■□□□□ 0.12
HMGN1-220ENST00000492280 RIMS1Q86UR5 1692 aaKnown RBP15.77■□□□□ 0.12
HMGN1-220ENST00000492280 GNAI1P63096 354 aa15.76■□□□□ 0.11
HMGN1-220ENST00000492280 IPO8O15397 1037 aaKnown RBP15.76■□□□□ 0.11
HMGN1-220ENST00000492280 AATKQ6ZMQ8 1374 aa15.75■□□□□ 0.11
HMGN1-220ENST00000492280 PEAK1Q9H792 1746 aa15.75■□□□□ 0.11
HMGN1-220ENST00000492280 ALDH1L2Q3SY69 923 aa15.75■□□□□ 0.11
HMGN1-220ENST00000492280 IFT57Q9NWB7 429 aa15.75■□□□□ 0.11
HMGN1-220ENST00000492280 ZNF853P0CG23 659 aa15.74■□□□□ 0.11
HMGN1-220ENST00000492280 HDAC1Q13547 482 aaPredicted RBP15.74■□□□□ 0.11
HMGN1-220ENST00000492280 EID1Q9Y6B2 187 aa15.74■□□□□ 0.11
HMGN1-220ENST00000492280 USP6P35125 1406 aa15.74■□□□□ 0.11
HMGN1-220ENST00000492280 NGDNQ8NEJ9 315 aaKnown RBP15.74■□□□□ 0.11
HMGN1-220ENST00000492280 CFAP44Q96MT7 982 aa15.74■□□□□ 0.11
HMGN1-220ENST00000492280 PLEKHG1Q9ULL1 1385 aa15.73■□□□□ 0.11
HMGN1-220ENST00000492280 AAMPQ13685 434 aa15.73■□□□□ 0.11
HMGN1-220ENST00000492280 ZNF692Q9BU19 519 aaPredicted RBP15.73■□□□□ 0.11
HMGN1-220ENST00000492280 MAP3K19Q56UN5 1328 aa15.73■□□□□ 0.11
HMGN1-220ENST00000492280 SMC5Q8IY18 1101 aa15.73■□□□□ 0.11
HMGN1-220ENST00000492280 TBC1D32Q96NH3 1257 aa15.73■□□□□ 0.11
HMGN1-220ENST00000492280 OVOS2A0A0J9YW53 1432 aa15.72■□□□□ 0.11
HMGN1-220ENST00000492280 OVOS2Q6IE36 1432 aa15.72■□□□□ 0.11
HMGN1-220ENST00000492280 ANKRD45Q5TZF3 282 aa15.72■□□□□ 0.11
HMGN1-220ENST00000492280 NRKQ7Z2Y5 1582 aa15.72■□□□□ 0.11
HMGN1-220ENST00000492280 ZBTB7BO15156 539 aaPredicted RBP15.72■□□□□ 0.11
HMGN1-220ENST00000492280 SIRT2Q8IXJ6 389 aa15.72■□□□□ 0.11
HMGN1-220ENST00000492280 UPF2Q9HAU5 1272 aaKnown RBP15.72■□□□□ 0.11
HMGN1-220ENST00000492280 C14orf37Q86TY3 774 aa15.71■□□□□ 0.11
HMGN1-220ENST00000492280 LTV1Q96GA3 475 aaPredicted RBP15.71■□□□□ 0.11
HMGN1-220ENST00000492280 APBB1O00213 710 aa15.71■□□□□ 0.11
HMGN1-220ENST00000492280 TBC1D2Q9BYX2 928 aa15.7■□□□□ 0.1
HMGN1-220ENST00000492280 SETD1BQ9UPS6 1966 aaKnown RBP15.7■□□□□ 0.1
HMGN1-220ENST00000492280 TOPAZ1Q8N9V7 1692 aa15.7■□□□□ 0.1
HMGN1-220ENST00000492280 KCNA6P17658 529 aa15.7■□□□□ 0.1
HMGN1-220ENST00000492280 SIRT1Q96EB6 747 aa15.69■□□□□ 0.1
HMGN1-220ENST00000492280 PLEKHG3A1L390 1219 aa15.68■□□□□ 0.1
HMGN1-220ENST00000492280 CALD1Q05682 793 aaKnown RBP15.68■□□□□ 0.1
HMGN1-220ENST00000492280 CHD1LQ86WJ1 897 aa15.68■□□□□ 0.1
HMGN1-220ENST00000492280 NECTIN2Q92692 538 aa15.68■□□□□ 0.1
HMGN1-220ENST00000492280 PTCH1Q13635 1447 aa15.68■□□□□ 0.1
HMGN1-220ENST00000492280 NUCB1Q02818 461 aa15.68■□□□□ 0.1
HMGN1-220ENST00000492280 ZBTB7CA1YPR0 619 aa15.67■□□□□ 0.1
HMGN1-220ENST00000492280 LMOD3Q0VAK6 560 aa15.67■□□□□ 0.1
HMGN1-220ENST00000492280 MTHFSDQ2M296 383 aaKnown RBP15.67■□□□□ 0.1
HMGN1-220ENST00000492280 USHBP1Q8N6Y0 703 aa15.67■□□□□ 0.1
HMGN1-220ENST00000492280 C22orf23Q9BZE7 217 aa15.67■□□□□ 0.1
HMGN1-220ENST00000492280 ABCC4O15439 1325 aa15.67■□□□□ 0.1
HMGN1-220ENST00000492280 NLRP6P59044 892 aa15.67■□□□□ 0.1
HMGN1-220ENST00000492280 AMPHP49418 695 aa15.67■□□□□ 0.1
HMGN1-220ENST00000492280 USP35Q9P2H5 1018 aa15.67■□□□□ 0.1
HMGN1-220ENST00000492280 FER1L4A9Z1Z3 1794 aa15.66■□□□□ 0.1
HMGN1-220ENST00000492280 DIP2AQ14689 1571 aa15.65■□□□□ 0.1
HMGN1-220ENST00000492280 BECN1Q14457 450 aa15.65■□□□□ 0.1
HMGN1-220ENST00000492280 EYA1Q99502 592 aa15.65■□□□□ 0.1
HMGN1-220ENST00000492280 CEP170BQ9Y4F5 1589 aaPredicted RBP15.65■□□□□ 0.1
HMGN1-220ENST00000492280 F6X3S4 739 aa15.65■□□□□ 0.1
HMGN1-220ENST00000492280 IL27Q8NEV9 243 aa15.65■□□□□ 0.1
HMGN1-220ENST00000492280 RTN4Q9NQC3 1192 aaKnown RBP15.65■□□□□ 0.1
HMGN1-220ENST00000492280 G2E3Q7L622 706 aa15.64■□□□□ 0.09
HMGN1-220ENST00000492280 THEMISQ8N1K5 641 aaPredicted RBP15.64■□□□□ 0.09
HMGN1-220ENST00000492280 C16orf71Q8IYS4 520 aaPredicted RBP15.64■□□□□ 0.09
HMGN1-220ENST00000492280 OTUD7AQ8TE49 926 aaPredicted RBP15.64■□□□□ 0.09
HMGN1-220ENST00000492280 MSH6P52701 1360 aa15.64■□□□□ 0.09
HMGN1-220ENST00000492280 SLC4A10Q6U841 1118 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms