RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 EVA1CP58658 441 aa35.6■■■■□ 3.29
TTC3-223ENST00000492275 FBLN1P23142 703 aa35.58■■■■□ 3.29
TTC3-223ENST00000492275 SPATA31A5Q5VU36 1347 aa35.57■■■■□ 3.29
TTC3-223ENST00000492275 SPATA31A7Q8IWB4 1347 aa35.57■■■■□ 3.29
TTC3-223ENST00000492275 COL5A2P05997 1499 aaPredicted RBP35.57■■■■□ 3.28
TTC3-223ENST00000492275 CGNL1Q0VF96 1302 aa35.56■■■■□ 3.28
TTC3-223ENST00000492275 SOCS7O14512 581 aa35.55■■■■□ 3.28
TTC3-223ENST00000492275 LARP1Q6PKG0 1096 aaKnown RBP35.55■■■■□ 3.28
TTC3-223ENST00000492275 ZEB1P37275 1124 aaPredicted RBP35.54■■■■□ 3.28
TTC3-223ENST00000492275 ONECUT3O60422 494 aaPredicted RBP35.52■■■■□ 3.28
TTC3-223ENST00000492275 SPATA31A1Q5TZJ5 1347 aa35.52■■■■□ 3.28
TTC3-223ENST00000492275 ABCC6O95255 1503 aa35.52■■■■□ 3.28
TTC3-223ENST00000492275 MAP3K19Q56UN5 1328 aa35.49■■■■□ 3.27
TTC3-223ENST00000492275 ANKRD26Q9UPS8 1709 aa35.48■■■■□ 3.27
TTC3-223ENST00000492275 FAM98CQ17RN3 349 aaKnown RBP35.47■■■■□ 3.27
TTC3-223ENST00000492275 BRWD3Q6RI45 1802 aa35.46■■■■□ 3.27
TTC3-223ENST00000492275 RRS1Q15050 365 aaKnown RBP35.45■■■■□ 3.27
TTC3-223ENST00000492275 SEPT12Q8IYM1 358 aa35.45■■■■□ 3.27
TTC3-223ENST00000492275 IP6K1Q92551 441 aa35.45■■■■□ 3.27
TTC3-223ENST00000492275 USP35Q9P2H5 1018 aa35.45■■■■□ 3.27
TTC3-223ENST00000492275 KNSTRNQ9Y448 316 aa35.45■■■■□ 3.27
TTC3-223ENST00000492275 CRB1P82279 1406 aa35.44■■■■□ 3.26
TTC3-223ENST00000492275 WDR17Q8IZU2 1322 aa35.44■■■■□ 3.26
TTC3-223ENST00000492275 PER1O15534 1290 aaPredicted RBP35.44■■■■□ 3.26
TTC3-223ENST00000492275 TOM1L2Q6ZVM7 507 aa35.41■■■■□ 3.26
TTC3-223ENST00000492275 MAP2P11137 1827 aaKnown RBP35.41■■■■□ 3.26
TTC3-223ENST00000492275 AMPHP49418 695 aa35.4■■■■□ 3.26
TTC3-223ENST00000492275 TCP11L2Q8N4U5 519 aa35.4■■■■□ 3.26
TTC3-223ENST00000492275 HOXC9P31274 260 aa35.39■■■■□ 3.26
TTC3-223ENST00000492275 AMER1Q5JTC6 1135 aaPredicted RBP35.39■■■■□ 3.26
TTC3-223ENST00000492275 THSD7AQ9UPZ6 1657 aa35.39■■■■□ 3.26
TTC3-223ENST00000492275 BLMP54132 1417 aaPredicted RBP35.39■■■■□ 3.26
TTC3-223ENST00000492275 NSD2O96028 1365 aa35.38■■■■□ 3.26
TTC3-223ENST00000492275 ERBB3P21860 1342 aa35.38■■■■□ 3.25
TTC3-223ENST00000492275 CSB-PGBD3P0DP91 1061 aa35.38■■■■□ 3.25
TTC3-223ENST00000492275 BARGINQ6ZT62 677 aa35.38■■■■□ 3.25
TTC3-223ENST00000492275 ANKRD24Q8TF21 1146 aa35.37■■■■□ 3.25
TTC3-223ENST00000492275 PEAK1Q9H792 1746 aa35.37■■■■□ 3.25
TTC3-223ENST00000492275 THRAP3Q9Y2W1 955 aaKnown RBP35.36■■■■□ 3.25
TTC3-223ENST00000492275 CARD10Q9BWT7 1032 aa35.35■■■■□ 3.25
TTC3-223ENST00000492275 A0A0G2JS52 829 aa35.34■■■■□ 3.25
TTC3-223ENST00000492275 MYT1Q01538 1121 aa35.34■■■■□ 3.25
TTC3-223ENST00000492275 RTL1A6NKG5 1358 aa35.34■■■■□ 3.25
TTC3-223ENST00000492275 EMILIN1Q9Y6C2 1016 aa35.33■■■■□ 3.25
TTC3-223ENST00000492275 TNNT2P45379 298 aaPredicted RBP35.32■■■■□ 3.24
TTC3-223ENST00000492275 LTV1Q96GA3 475 aaPredicted RBP35.31■■■■□ 3.24
TTC3-223ENST00000492275 KIF24Q5T7B8 1368 aa35.3■■■■□ 3.24
TTC3-223ENST00000492275 MORC1Q86VD1 984 aa35.3■■■■□ 3.24
TTC3-223ENST00000492275 POLKQ9UBT6 870 aa35.3■■■■□ 3.24
TTC3-223ENST00000492275 WNK3Q9BYP7 1800 aa35.28■■■■□ 3.24
TTC3-223ENST00000492275 HSP90AB2PQ58FF8 381 aa35.28■■■■□ 3.24
TTC3-223ENST00000492275 KRT27Q7Z3Y8 459 aa35.28■■■■□ 3.24
TTC3-223ENST00000492275 NLRP2Q9NX02 1062 aa35.28■■■■□ 3.24
TTC3-223ENST00000492275 RGPD2P0DJD1 1756 aa35.28■■■■□ 3.24
TTC3-223ENST00000492275 FLT4P35916 1363 aa35.27■■■■□ 3.24
TTC3-223ENST00000492275 INSRP06213 1382 aa35.25■■■■□ 3.23
TTC3-223ENST00000492275 FAM208AQ9UK61 1670 aaKnown RBP35.25■■■■□ 3.23
TTC3-223ENST00000492275 PARP4Q9UKK3 1724 aaKnown RBP35.25■■■■□ 3.23
TTC3-223ENST00000492275 PPM1GO15355 546 aaPredicted RBP35.24■■■■□ 3.23
TTC3-223ENST00000492275 UPF1Q92900 1129 aaKnown RBP eCLIP35.24■■■■□ 3.23
TTC3-223ENST00000492275 CC2D1BQ5T0F9 858 aaKnown RBP35.23■■■■□ 3.23
TTC3-223ENST00000492275 NPC1L1Q9UHC9 1359 aa35.23■■■■□ 3.23
TTC3-223ENST00000492275 DISP2A7MBM2 1401 aa35.21■■■■□ 3.23
TTC3-223ENST00000492275 CDCA7Q9BWT1 371 aaPredicted RBP35.18■■■■□ 3.22
TTC3-223ENST00000492275 FAM182BQ5T319 152 aa35.17■■■■□ 3.22
TTC3-223ENST00000492275 NBPF6Q5VWK0 638 aa35.16■■■■□ 3.22
TTC3-223ENST00000492275 NBPF4Q96M43 638 aa35.16■■■■□ 3.22
TTC3-223ENST00000492275 LRRC37A3O60309 1634 aa35.16■■■■□ 3.22
TTC3-223ENST00000492275 SMG6Q86US8 1419 aaKnown RBP35.15■■■■□ 3.22
TTC3-223ENST00000492275 CNGB1Q14028 1251 aaPredicted RBP35.15■■■■□ 3.22
TTC3-223ENST00000492275 PDE3BQ13370 1112 aa35.14■■■■□ 3.22
TTC3-223ENST00000492275 DDB1Q16531 1140 aa35.12■■■■□ 3.21
TTC3-223ENST00000492275 IL2RBP14784 551 aa35.11■■■■□ 3.21
TTC3-223ENST00000492275 USHBP1Q8N6Y0 703 aa35.08■■■■□ 3.21
TTC3-223ENST00000492275 DDX10Q13206 875 aaKnown RBP35.07■■■■□ 3.2
TTC3-223ENST00000492275 EP400Q96L91 3159 aa35.07■■■■□ 3.2
TTC3-223ENST00000492275 EXOC5O00471 708 aa35.06■■■■□ 3.2
TTC3-223ENST00000492275 EIF4A2Q14240 407 aaKnown RBP35.06■■■■□ 3.2
TTC3-223ENST00000492275 MTHFSP49914 203 aa35.05■■■■□ 3.2
TTC3-223ENST00000492275 FAM196AQ6ZSG2 479 aa35.03■■■■□ 3.2
TTC3-223ENST00000492275 MARCH10Q8NA82 808 aaPredicted RBP35.03■■■■□ 3.2
TTC3-223ENST00000492275 EYA1Q99502 592 aa35.03■■■■□ 3.2
TTC3-223ENST00000492275 TNS2Q63HR2 1409 aa35.02■■■■□ 3.2
TTC3-223ENST00000492275 NCAPD2Q15021 1401 aa35.01■■■■□ 3.2
TTC3-223ENST00000492275 CCDC125Q86Z20 511 aa35.01■■■■□ 3.2
TTC3-223ENST00000492275 MEGF6O75095 1541 aa35.01■■■■□ 3.19
TTC3-223ENST00000492275 SBF2Q86WG5 1849 aa34.96■■■■□ 3.19
TTC3-223ENST00000492275 OVOS2A0A0G2JMS6 1433 aa34.96■■■■□ 3.19
TTC3-223ENST00000492275 IL13P35225 146 aa34.94■■■■□ 3.18
TTC3-223ENST00000492275 RAPGEF4Q8WZA2 1011 aa34.94■■■■□ 3.18
TTC3-223ENST00000492275 SHANK3Q9BYB0 1731 aa34.94■■■■□ 3.18
TTC3-223ENST00000492275 RGPD1P0DJD0 1748 aa34.93■■■■□ 3.18
TTC3-223ENST00000492275 IGSF1Q8N6C5 1336 aa34.92■■■■□ 3.18
TTC3-223ENST00000492275 TRIM37O94972 964 aa34.92■■■■□ 3.18
TTC3-223ENST00000492275 TATP17735 454 aaPredicted RBP34.92■■■■□ 3.18
TTC3-223ENST00000492275 ZNF316A6NFI3 1004 aaPredicted RBP34.91■■■■□ 3.18
TTC3-223ENST00000492275 ZCRB1Q8TBF4 217 aaKnown RBP34.91■■■■□ 3.18
TTC3-223ENST00000492275 BCL9O00512 1426 aa34.9■■■■□ 3.18
TTC3-223ENST00000492275 TNS1Q9HBL0 1735 aaKnown RBP34.9■■■■□ 3.18
TTC3-223ENST00000492275 PPP2R1AP30153 589 aa34.9■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms