RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 ABCA8O94911 1581 aa7.87□□□□□ -1.15
CCDC6-202ENST00000491922 PLEKHD1A6NEE1 506 aa7.87□□□□□ -1.15
CCDC6-202ENST00000491922 IPO8O15397 1037 aaKnown RBP7.87□□□□□ -1.15
CCDC6-202ENST00000491922 FAM184AQ8NB25 1140 aa7.87□□□□□ -1.15
CCDC6-202ENST00000491922 CARD14Q9BXL6 1004 aa7.87□□□□□ -1.15
CCDC6-202ENST00000491922 DIAPH3Q9NSV4 1193 aa7.87□□□□□ -1.15
CCDC6-202ENST00000491922 ABCC11Q96J66 1382 aa7.87□□□□□ -1.15
CCDC6-202ENST00000491922 PPRC1Q5VV67 1664 aaKnown RBP7.87□□□□□ -1.15
CCDC6-202ENST00000491922 ZNF518AQ6AHZ1 1483 aa7.86□□□□□ -1.15
CCDC6-202ENST00000491922 PHF14O94880 888 aa7.86□□□□□ -1.15
CCDC6-202ENST00000491922 GABPB1Q06547 395 aaPredicted RBP7.86□□□□□ -1.15
CCDC6-202ENST00000491922 CHAF1AQ13111 956 aaPredicted RBP7.86□□□□□ -1.15
CCDC6-202ENST00000491922 HOMEZQ8IX15 550 aa7.86□□□□□ -1.15
CCDC6-202ENST00000491922 TMEM57Q8N5G2 664 aa7.86□□□□□ -1.15
CCDC6-202ENST00000491922 ANKRD7Q92527 254 aa7.86□□□□□ -1.15
CCDC6-202ENST00000491922 TSC1Q92574 1164 aa7.86□□□□□ -1.15
CCDC6-202ENST00000491922 CHMP4AQ9BY43 222 aa7.86□□□□□ -1.15
CCDC6-202ENST00000491922 CHMP4BQ9H444 224 aaKnown RBP7.86□□□□□ -1.15
CCDC6-202ENST00000491922 PREX2Q70Z35 1606 aa7.86□□□□□ -1.15
CCDC6-202ENST00000491922 NOS1P29475 1434 aa7.86□□□□□ -1.15
CCDC6-202ENST00000491922 RNF214Q8ND24 703 aa7.86□□□□□ -1.15
CCDC6-202ENST00000491922 SSH1Q8WYL5 1049 aa7.86□□□□□ -1.15
CCDC6-202ENST00000491922 CFAP53Q96M91 514 aa7.86□□□□□ -1.15
CCDC6-202ENST00000491922 USP32Q8NFA0 1604 aa7.86□□□□□ -1.15
CCDC6-202ENST00000491922 UHRF1BP1LA0JNW5 1464 aa7.86□□□□□ -1.15
CCDC6-202ENST00000491922 ST18O60284 1047 aa7.85□□□□□ -1.15
CCDC6-202ENST00000491922 ZNF771Q7L3S4 317 aaPredicted RBP7.85□□□□□ -1.15
CCDC6-202ENST00000491922 MORC1Q86VD1 984 aa7.85□□□□□ -1.15
CCDC6-202ENST00000491922 JARID2Q92833 1246 aaPredicted RBP7.85□□□□□ -1.15
CCDC6-202ENST00000491922 OGFRQ9NZT2 677 aa7.85□□□□□ -1.15
CCDC6-202ENST00000491922 NOB1Q9ULX3 412 aaKnown RBP7.85□□□□□ -1.15
CCDC6-202ENST00000491922 CDC42BPBQ9Y5S2 1711 aa7.85□□□□□ -1.15
CCDC6-202ENST00000491922 MED14O60244 1454 aa7.85□□□□□ -1.15
CCDC6-202ENST00000491922 CDK11BP21127 795 aaKnown RBP7.85□□□□□ -1.15
CCDC6-202ENST00000491922 PKP1Q13835 747 aa7.85□□□□□ -1.15
CCDC6-202ENST00000491922 ANKRD45Q5TZF3 282 aa7.85□□□□□ -1.15
CCDC6-202ENST00000491922 DHX37Q8IY37 1157 aaKnown RBP7.85□□□□□ -1.15
CCDC6-202ENST00000491922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.85□□□□□ -1.15
CCDC6-202ENST00000491922 SPDYE4A6NLX3 237 aa7.84□□□□□ -1.15
CCDC6-202ENST00000491922 EXOSC9Q06265 439 aaKnown RBP7.84□□□□□ -1.15
CCDC6-202ENST00000491922 CGNQ9P2M7 1197 aaKnown RBP7.84□□□□□ -1.15
CCDC6-202ENST00000491922 ZDHHC9Q9Y397 364 aa7.84□□□□□ -1.15
CCDC6-202ENST00000491922 MYO3AQ8NEV4 1616 aa7.84□□□□□ -1.15
CCDC6-202ENST00000491922 CHMP7Q8WUX9 453 aaPredicted RBP7.84□□□□□ -1.15
CCDC6-202ENST00000491922 TRPM2O94759 1503 aa7.84□□□□□ -1.15
CCDC6-202ENST00000491922 CTIFO43310 598 aaKnown RBP7.83□□□□□ -1.16
CCDC6-202ENST00000491922 TPM3P06753 285 aa7.83□□□□□ -1.16
CCDC6-202ENST00000491922 SYCP1Q15431 976 aa7.83□□□□□ -1.16
CCDC6-202ENST00000491922 NSFL1CQ9UNZ2 370 aaKnown RBP7.83□□□□□ -1.16
CCDC6-202ENST00000491922 IL16Q14005 1332 aa7.83□□□□□ -1.16
CCDC6-202ENST00000491922 PPIP5K1Q6PFW1 1433 aa7.83□□□□□ -1.16
CCDC6-202ENST00000491922 NSD3Q9BZ95 1437 aa7.83□□□□□ -1.16
CCDC6-202ENST00000491922 CCDC66A2RUB6 948 aa7.83□□□□□ -1.16
CCDC6-202ENST00000491922 U2AF2P26368 475 aaKnown RBP eCLIP7.83□□□□□ -1.16
CCDC6-202ENST00000491922 TSR2Q969E8 191 aaKnown RBP7.83□□□□□ -1.16
CCDC6-202ENST00000491922 ANKRD36BQ8N2N9 1353 aa7.83□□□□□ -1.16
CCDC6-202ENST00000491922 SLC20A2Q08357 652 aa7.82□□□□□ -1.16
CCDC6-202ENST00000491922 ALDH1L2Q3SY69 923 aa7.82□□□□□ -1.16
CCDC6-202ENST00000491922 USP26Q9BXU7 913 aa7.82□□□□□ -1.16
CCDC6-202ENST00000491922 SBNO2Q9Y2G9 1366 aa7.82□□□□□ -1.16
CCDC6-202ENST00000491922 ZBTB7CA1YPR0 619 aa7.82□□□□□ -1.16
CCDC6-202ENST00000491922 RIOK3O14730 519 aaKnown RBP7.82□□□□□ -1.16
CCDC6-202ENST00000491922 ZGPATQ8N5A5 531 aaKnown RBP7.82□□□□□ -1.16
CCDC6-202ENST00000491922 CARMIL2Q6F5E8 1435 aa7.82□□□□□ -1.16
CCDC6-202ENST00000491922 ATP10BO94823 1461 aa7.82□□□□□ -1.16
CCDC6-202ENST00000491922 SYCP2Q9BX26 1530 aa7.82□□□□□ -1.16
CCDC6-202ENST00000491922 FAM177BA6PVY3 158 aa7.82□□□□□ -1.16
CCDC6-202ENST00000491922 HOXD11P31277 338 aaPredicted RBP7.82□□□□□ -1.16
CCDC6-202ENST00000491922 INTS3Q68E01 1043 aaKnown RBP7.82□□□□□ -1.16
CCDC6-202ENST00000491922 ZNF830Q96NB3 372 aaPredicted RBP7.82□□□□□ -1.16
CCDC6-202ENST00000491922 TTC12Q9H892 705 aaPredicted RBP7.82□□□□□ -1.16
CCDC6-202ENST00000491922 NEURL4Q96JN8 1562 aa7.81□□□□□ -1.16
CCDC6-202ENST00000491922 VGFO15240 615 aaPredicted RBP7.81□□□□□ -1.16
CCDC6-202ENST00000491922 ADCY5O95622 1261 aa7.81□□□□□ -1.16
CCDC6-202ENST00000491922 MYOM2P54296 1465 aa7.81□□□□□ -1.16
CCDC6-202ENST00000491922 BRD1O95696 1058 aa7.81□□□□□ -1.16
CCDC6-202ENST00000491922 MTHFSP49914 203 aa7.81□□□□□ -1.16
CCDC6-202ENST00000491922 BRPF1P55201 1214 aaPredicted RBP7.81□□□□□ -1.16
CCDC6-202ENST00000491922 CASC1Q6TDU7 716 aa7.81□□□□□ -1.16
CCDC6-202ENST00000491922 KIAA1524Q8TCG1 905 aa7.81□□□□□ -1.16
CCDC6-202ENST00000491922 DNAJC2Q99543 621 aaKnown RBP7.81□□□□□ -1.16
CCDC6-202ENST00000491922 USP25Q9UHP3 1055 aa7.81□□□□□ -1.16
CCDC6-202ENST00000491922 PTPRTO14522 1441 aa7.81□□□□□ -1.16
CCDC6-202ENST00000491922 INO80Q9ULG1 1556 aaPredicted RBP7.8□□□□□ -1.16
CCDC6-202ENST00000491922 ABCA6Q8N139 1617 aa7.8□□□□□ -1.16
CCDC6-202ENST00000491922 TRAPPC8Q9Y2L5 1435 aa7.8□□□□□ -1.16
CCDC6-202ENST00000491922 PIK3R4Q99570 1358 aa7.8□□□□□ -1.16
CCDC6-202ENST00000491922 U2AF1L5P0DN76 240 aaPredicted RBP7.8□□□□□ -1.16
CCDC6-202ENST00000491922 GSPT1P15170 499 aaKnown RBP7.8□□□□□ -1.16
CCDC6-202ENST00000491922 U2AF1Q01081 240 aaKnown RBP eCLIP7.8□□□□□ -1.16
CCDC6-202ENST00000491922 SAMD1Q6SPF0 538 aaPredicted RBP7.8□□□□□ -1.16
CCDC6-202ENST00000491922 C17orf53Q8N3J3 647 aaPredicted RBP7.8□□□□□ -1.16
CCDC6-202ENST00000491922 ZNF428Q96B54 188 aa7.8□□□□□ -1.16
CCDC6-202ENST00000491922 MAP3K4Q9Y6R4 1608 aa7.8□□□□□ -1.16
CCDC6-202ENST00000491922 ZBTB7BO15156 539 aaPredicted RBP7.8□□□□□ -1.16
CCDC6-202ENST00000491922 IGSF3O75054 1194 aa7.8□□□□□ -1.16
CCDC6-202ENST00000491922 MCM2P49736 904 aa7.8□□□□□ -1.16
CCDC6-202ENST00000491922 FAM193AP78312 1265 aa7.8□□□□□ -1.16
CCDC6-202ENST00000491922 IRX5P78411 483 aaPredicted RBP7.8□□□□□ -1.16
CCDC6-202ENST00000491922 TTC22Q5TAA0 569 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms