RNA–Protein interactions for RNA: ENST00000491729.1

LSS-210, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 2,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-210ENST00000491729 USP54Q70EL1 1684 aa17.14■□□□□ 0.33
LSS-210ENST00000491729 MS4A1P11836 297 aa17.13■□□□□ 0.33
LSS-210ENST00000491729 NFAT5O94916 1531 aa17.13■□□□□ 0.33
LSS-210ENST00000491729 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.12■□□□□ 0.33
LSS-210ENST00000491729 SBNO1A3KN83 1393 aa17.12■□□□□ 0.33
LSS-210ENST00000491729 USP19O94966 1318 aa17.12■□□□□ 0.33
LSS-210ENST00000491729 ROBO1Q9Y6N7 1651 aa17.11■□□□□ 0.33
LSS-210ENST00000491729 DIAPH1O60610 1272 aaKnown RBP17.11■□□□□ 0.33
LSS-210ENST00000491729 EIF4A2Q14240 407 aaKnown RBP17.11■□□□□ 0.33
LSS-210ENST00000491729 DUSP27Q5VZP5 1158 aa17.11■□□□□ 0.33
LSS-210ENST00000491729 U2SURPO15042 1029 aaKnown RBP17.11■□□□□ 0.33
LSS-210ENST00000491729 U2AF1L5P0DN76 240 aaPredicted RBP17.11■□□□□ 0.33
LSS-210ENST00000491729 PIP4K2BP78356 416 aa17.11■□□□□ 0.33
LSS-210ENST00000491729 U2AF1Q01081 240 aaKnown RBP eCLIP17.11■□□□□ 0.33
LSS-210ENST00000491729 CFAP53Q96M91 514 aa17.11■□□□□ 0.33
LSS-210ENST00000491729 NOP58Q9Y2X3 529 aaKnown RBP17.11■□□□□ 0.33
LSS-210ENST00000491729 CDK12Q9NYV4 1490 aaPredicted RBP17.1■□□□□ 0.33
LSS-210ENST00000491729 TNS3Q68CZ2 1445 aa17.1■□□□□ 0.33
LSS-210ENST00000491729 ZC3H6P61129 1189 aaKnown RBP17.09■□□□□ 0.33
LSS-210ENST00000491729 AXIN2Q9Y2T1 843 aa17.09■□□□□ 0.33
LSS-210ENST00000491729 HOXC9P31274 260 aa17.09■□□□□ 0.33
LSS-210ENST00000491729 NHSL1Q5SYE7 1610 aa17.08■□□□□ 0.33
LSS-210ENST00000491729 ZBTB7CA1YPR0 619 aa17.08■□□□□ 0.33
LSS-210ENST00000491729 HMOX1P09601 288 aa17.08■□□□□ 0.33
LSS-210ENST00000491729 ARHGEF25Q86VW2 580 aa17.08■□□□□ 0.33
LSS-210ENST00000491729 SLIT3O75094 1523 aa17.08■□□□□ 0.32
LSS-210ENST00000491729 APAF1O14727 1248 aa17.08■□□□□ 0.32
LSS-210ENST00000491729 AEBP1Q8IUX7 1158 aa17.08■□□□□ 0.32
LSS-210ENST00000491729 PLEKHF1Q96S99 279 aa17.08■□□□□ 0.32
LSS-210ENST00000491729 AMPHP49418 695 aa17.07■□□□□ 0.32
LSS-210ENST00000491729 SLFN5Q08AF3 891 aa17.07■□□□□ 0.32
LSS-210ENST00000491729 CRBNQ96SW2 442 aa17.07■□□□□ 0.32
LSS-210ENST00000491729 IPO9Q96P70 1041 aaKnown RBP17.06■□□□□ 0.32
LSS-210ENST00000491729 LTN1O94822 1766 aa17.06■□□□□ 0.32
LSS-210ENST00000491729 UBAP1LF5GYI3 381 aa17.06■□□□□ 0.32
LSS-210ENST00000491729 TRMT2AQ8IZ69 625 aaKnown RBP17.06■□□□□ 0.32
LSS-210ENST00000491729 CERKQ8TCT0 537 aa17.06■□□□□ 0.32
LSS-210ENST00000491729 LTV1Q96GA3 475 aaPredicted RBP17.05■□□□□ 0.32
LSS-210ENST00000491729 PHACTR3Q96KR7 559 aa17.05■□□□□ 0.32
LSS-210ENST00000491729 RRP7AQ9Y3A4 280 aaKnown RBP17.05■□□□□ 0.32
LSS-210ENST00000491729 E9PSI1 815 aa17.05■□□□□ 0.32
LSS-210ENST00000491729 PLIN1O60240 522 aa17.05■□□□□ 0.32
LSS-210ENST00000491729 CRYBG1Q9Y4K1 1723 aa17.04■□□□□ 0.32
LSS-210ENST00000491729 FLT4P35916 1363 aa17.04■□□□□ 0.32
LSS-210ENST00000491729 CHRNA2Q15822 529 aa17.04■□□□□ 0.32
LSS-210ENST00000491729 KCNH5Q8NCM2 988 aa17.04■□□□□ 0.32
LSS-210ENST00000491729 RSPH6AQ9H0K4 717 aa17.04■□□□□ 0.32
LSS-210ENST00000491729 IP6K1Q92551 441 aa17.03■□□□□ 0.32
LSS-210ENST00000491729 EYA1Q99502 592 aa17.03■□□□□ 0.32
LSS-210ENST00000491729 TOM1O60784 492 aa17.03■□□□□ 0.32
LSS-210ENST00000491729 TCP11L2Q8N4U5 519 aa17.02■□□□□ 0.32
LSS-210ENST00000491729 IQSEC2Q5JU85 1478 aa17.02■□□□□ 0.31
LSS-210ENST00000491729 NEUROD2Q15784 382 aa17.02■□□□□ 0.31
LSS-210ENST00000491729 PHRF1Q9P1Y6 1649 aaKnown RBP17.01■□□□□ 0.31
LSS-210ENST00000491729 PRKAR2BP31323 418 aa17.01■□□□□ 0.31
LSS-210ENST00000491729 CENPQQ7L2Z9 268 aaPredicted RBP17.01■□□□□ 0.31
LSS-210ENST00000491729 LRRC59Q96AG4 307 aaKnown RBP17.01■□□□□ 0.31
LSS-210ENST00000491729 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
LSS-210ENST00000491729 ARHGEF10O15013 1369 aa17.01■□□□□ 0.31
LSS-210ENST00000491729 RGPD5Q99666 1765 aa17.01■□□□□ 0.31
LSS-210ENST00000491729 SULT6B1Q6IMI4 303 aa17■□□□□ 0.31
LSS-210ENST00000491729 USHBP1Q8N6Y0 703 aa17■□□□□ 0.31
LSS-210ENST00000491729 KIAA0232Q92628 1395 aa17■□□□□ 0.31
LSS-210ENST00000491729 AHDC1Q5TGY3 1603 aaPredicted RBP17■□□□□ 0.31
LSS-210ENST00000491729 PDE4AP27815 886 aa17■□□□□ 0.31
LSS-210ENST00000491729 NBPF6Q5VWK0 638 aa17■□□□□ 0.31
LSS-210ENST00000491729 NBPF4Q96M43 638 aa17■□□□□ 0.31
LSS-210ENST00000491729 BACH2Q9BYV9 841 aa17■□□□□ 0.31
LSS-210ENST00000491729 SPINK5Q9NQ38 1064 aaPredicted RBP17■□□□□ 0.31
LSS-210ENST00000491729 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
LSS-210ENST00000491729 KDM2BQ8NHM5 1336 aa17■□□□□ 0.31
LSS-210ENST00000491729 RGPD1P0DJD0 1748 aa16.99■□□□□ 0.31
LSS-210ENST00000491729 RGPD2P0DJD1 1756 aa16.98■□□□□ 0.31
LSS-210ENST00000491729 COL18A1P39060 1754 aa16.98■□□□□ 0.31
LSS-210ENST00000491729 FCHSD2O94868 740 aa16.98■□□□□ 0.31
LSS-210ENST00000491729 ZBTB47Q9UFB7 747 aaPredicted RBP16.98■□□□□ 0.31
LSS-210ENST00000491729 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
LSS-210ENST00000491729 COL16A1Q07092 1604 aaPredicted RBP16.97■□□□□ 0.31
LSS-210ENST00000491729 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
LSS-210ENST00000491729 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.31
LSS-210ENST00000491729 FAM83GA6ND36 823 aa16.96■□□□□ 0.31
LSS-210ENST00000491729 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
LSS-210ENST00000491729 RTL1A6NKG5 1358 aa16.95■□□□□ 0.3
LSS-210ENST00000491729 TMPOP42166 694 aaKnown RBP16.95■□□□□ 0.3
LSS-210ENST00000491729 ANKRD24Q8TF21 1146 aa16.95■□□□□ 0.3
LSS-210ENST00000491729 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
LSS-210ENST00000491729 TRIM35Q9UPQ4 493 aa16.95■□□□□ 0.3
LSS-210ENST00000491729 ABCA3Q99758 1704 aa16.95■□□□□ 0.3
LSS-210ENST00000491729 PHLPP1O60346 1717 aa16.95■□□□□ 0.3
LSS-210ENST00000491729 WWC1Q8IX03 1113 aa16.94■□□□□ 0.3
LSS-210ENST00000491729 CPDO75976 1380 aa16.94■□□□□ 0.3
LSS-210ENST00000491729 CAMTA1Q9Y6Y1 1673 aa16.93■□□□□ 0.3
LSS-210ENST00000491729 KDRP35968 1356 aa16.92■□□□□ 0.3
LSS-210ENST00000491729 ERBB3P21860 1342 aa16.92■□□□□ 0.3
LSS-210ENST00000491729 PDE3AQ14432 1141 aa16.92■□□□□ 0.3
LSS-210ENST00000491729 PRDM11Q9NQV5 511 aa16.91■□□□□ 0.3
LSS-210ENST00000491729 CCDC27Q2M243 656 aa16.91■□□□□ 0.3
LSS-210ENST00000491729 THUMPD2Q9BTF0 503 aaKnown RBP16.91■□□□□ 0.3
LSS-210ENST00000491729 RIPK4P57078 832 aa16.9■□□□□ 0.3
LSS-210ENST00000491729 AAMPQ13685 434 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms