RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.9■■■□□ 2.06
SREBF1-216ENST00000490796 WDR17Q8IZU2 1322 aa27.9■■■□□ 2.06
SREBF1-216ENST00000490796 AXIN2Q9Y2T1 843 aa27.89■■■□□ 2.06
SREBF1-216ENST00000490796 CDCA7Q9BWT1 371 aaPredicted RBP27.86■■■□□ 2.05
SREBF1-216ENST00000490796 PARP4Q9UKK3 1724 aaKnown RBP27.85■■■□□ 2.05
SREBF1-216ENST00000490796 TRIM26Q12899 539 aaPredicted RBP27.85■■■□□ 2.05
SREBF1-216ENST00000490796 OVOS2A0A0G2JMS6 1433 aa27.84■■■□□ 2.05
SREBF1-216ENST00000490796 OVOS2A0A0J9YW53 1432 aa27.84■■■□□ 2.05
SREBF1-216ENST00000490796 OVOS2Q6IE36 1432 aa27.84■■■□□ 2.05
SREBF1-216ENST00000490796 NBPF14Q5TI25 921 aa27.84■■■□□ 2.05
SREBF1-216ENST00000490796 TERF2IPQ9NYB0 399 aa27.84■■■□□ 2.05
SREBF1-216ENST00000490796 COL18A1P39060 1754 aa27.82■■■□□ 2.04
SREBF1-216ENST00000490796 CARD10Q9BWT7 1032 aa27.82■■■□□ 2.04
SREBF1-216ENST00000490796 SLC12A5Q9H2X9 1139 aa27.82■■■□□ 2.04
SREBF1-216ENST00000490796 LRP5O75197 1615 aa27.81■■■□□ 2.04
SREBF1-216ENST00000490796 NME9Q86XW9 330 aa27.81■■■□□ 2.04
SREBF1-216ENST00000490796 MON2Q7Z3U7 1717 aa27.8■■■□□ 2.04
SREBF1-216ENST00000490796 USP31Q70CQ4 1352 aa27.79■■■□□ 2.04
SREBF1-216ENST00000490796 SLC24A1O60721 1099 aa27.79■■■□□ 2.04
SREBF1-216ENST00000490796 PUS7Q96PZ0 661 aaKnown RBP27.78■■■□□ 2.04
SREBF1-216ENST00000490796 NFAT5O94916 1531 aa27.77■■■□□ 2.04
SREBF1-216ENST00000490796 CCDC7Q96M83 1385 aa27.76■■■□□ 2.03
SREBF1-216ENST00000490796 EXOC5O00471 708 aa27.76■■■□□ 2.03
SREBF1-216ENST00000490796 CD163L1Q9NR16 1453 aa27.76■■■□□ 2.03
SREBF1-216ENST00000490796 EDC4Q6P2E9 1401 aaKnown RBP27.75■■■□□ 2.03
SREBF1-216ENST00000490796 LRRC37A3O60309 1634 aa27.75■■■□□ 2.03
SREBF1-216ENST00000490796 ST20-MTHFSA0A0A6YYL1 179 aa27.75■■■□□ 2.03
SREBF1-216ENST00000490796 RGPD5Q99666 1765 aa27.74■■■□□ 2.03
SREBF1-216ENST00000490796 NLRP2Q9NX02 1062 aa27.74■■■□□ 2.03
SREBF1-216ENST00000490796 MARCH10Q8NA82 808 aaPredicted RBP27.73■■■□□ 2.03
SREBF1-216ENST00000490796 BCL11BQ9C0K0 894 aaPredicted RBP27.73■■■□□ 2.03
SREBF1-216ENST00000490796 A0A1W2PP64 1363 aa27.73■■■□□ 2.03
SREBF1-216ENST00000490796 ABCC6O95255 1503 aa27.72■■■□□ 2.03
SREBF1-216ENST00000490796 NINLQ9Y2I6 1382 aa27.71■■■□□ 2.03
SREBF1-216ENST00000490796 PLSCR1O15162 318 aa27.7■■■□□ 2.02
SREBF1-216ENST00000490796 RREB1Q92766 1687 aa27.7■■■□□ 2.02
SREBF1-216ENST00000490796 ERBB3P21860 1342 aa27.69■■■□□ 2.02
SREBF1-216ENST00000490796 TESK2Q96S53 571 aa27.69■■■□□ 2.02
SREBF1-216ENST00000490796 PEAK1Q9H792 1746 aa27.69■■■□□ 2.02
SREBF1-216ENST00000490796 WNK3Q9BYP7 1800 aa27.69■■■□□ 2.02
SREBF1-216ENST00000490796 NUP188Q5SRE5 1749 aa27.67■■■□□ 2.02
SREBF1-216ENST00000490796 ANKRD24Q8TF21 1146 aa27.67■■■□□ 2.02
SREBF1-216ENST00000490796 USP54Q70EL1 1684 aa27.65■■■□□ 2.02
SREBF1-216ENST00000490796 COG3Q96JB2 828 aa27.65■■■□□ 2.02
SREBF1-216ENST00000490796 BCL9O00512 1426 aa27.65■■■□□ 2.02
SREBF1-216ENST00000490796 IL2RBP14784 551 aa27.64■■■□□ 2.02
SREBF1-216ENST00000490796 TMF1P82094 1093 aa27.64■■■□□ 2.02
SREBF1-216ENST00000490796 SBF2Q86WG5 1849 aa27.64■■■□□ 2.01
SREBF1-216ENST00000490796 PTF1AQ7RTS3 328 aa27.63■■■□□ 2.01
SREBF1-216ENST00000490796 TNS2Q63HR2 1409 aa27.63■■■□□ 2.01
SREBF1-216ENST00000490796 LTN1O94822 1766 aa27.63■■■□□ 2.01
SREBF1-216ENST00000490796 IP6K1Q92551 441 aa27.6■■■□□ 2.01
SREBF1-216ENST00000490796 LTV1Q96GA3 475 aaPredicted RBP27.6■■■□□ 2.01
SREBF1-216ENST00000490796 SPON1Q9HCB6 807 aa27.6■■■□□ 2.01
SREBF1-216ENST00000490796 PPP1R1BQ9UD71 204 aaPredicted RBP27.6■■■□□ 2.01
SREBF1-216ENST00000490796 USP47Q96K76 1375 aa27.6■■■□□ 2.01
SREBF1-216ENST00000490796 RGPD3A6NKT7 1758 aaPredicted RBP27.58■■■□□ 2.01
SREBF1-216ENST00000490796 RGPD4Q7Z3J3 1758 aa27.58■■■□□ 2.01
SREBF1-216ENST00000490796 AMPHP49418 695 aa27.58■■■□□ 2.01
SREBF1-216ENST00000490796 CDCA8Q53HL2 280 aa27.57■■■□□ 2
SREBF1-216ENST00000490796 ANKRD36BQ8N2N9 1353 aa27.57■■■□□ 2
SREBF1-216ENST00000490796 KCNQ2O43526 872 aa27.56■■■□□ 2
SREBF1-216ENST00000490796 ACSBG1Q96GR2 724 aa27.56■■■□□ 2
SREBF1-216ENST00000490796 TXNRD1Q16881 649 aa27.55■■■□□ 2
SREBF1-216ENST00000490796 ANO8Q9HCE9 1232 aaPredicted RBP27.54■■■□□ 2
SREBF1-216ENST00000490796 STK32BQ9NY57 414 aa27.54■■■□□ 2
SREBF1-216ENST00000490796 PROM2Q8N271 834 aa27.53■■■□□ 2
SREBF1-216ENST00000490796 KAT6BQ8WYB5 2073 aa27.52■■■□□ 2
SREBF1-216ENST00000490796 MAP3K19Q56UN5 1328 aa27.52■■■□□ 2
SREBF1-216ENST00000490796 HOXC9P31274 260 aa27.5■■□□□ 1.99
SREBF1-216ENST00000490796 DDX54Q8TDD1 881 aaKnown RBP27.5■■□□□ 1.99
SREBF1-216ENST00000490796 PCGF6Q9BYE7 350 aa27.49■■□□□ 1.99
SREBF1-216ENST00000490796 TIMELESSQ9UNS1 1208 aa27.49■■□□□ 1.99
SREBF1-216ENST00000490796 FBLN1P23142 703 aa27.48■■□□□ 1.99
SREBF1-216ENST00000490796 GGNBP2Q9H3C7 697 aa27.48■■□□□ 1.99
SREBF1-216ENST00000490796 DCAF8L1A6NGE4 600 aa27.46■■□□□ 1.99
SREBF1-216ENST00000490796 FYB1O15117 783 aa27.46■■□□□ 1.99
SREBF1-216ENST00000490796 NHSQ6T4R5 1651 aa27.46■■□□□ 1.99
SREBF1-216ENST00000490796 RRS1Q15050 365 aaKnown RBP27.45■■□□□ 1.98
SREBF1-216ENST00000490796 SLC15A2Q16348 729 aa27.45■■□□□ 1.98
SREBF1-216ENST00000490796 FAM208AQ9UK61 1670 aaKnown RBP27.45■■□□□ 1.98
SREBF1-216ENST00000490796 ZBTB7AO95365 584 aa27.43■■□□□ 1.98
SREBF1-216ENST00000490796 RTL1A6NKG5 1358 aa27.43■■□□□ 1.98
SREBF1-216ENST00000490796 CLSPNQ9HAW4 1339 aa27.41■■□□□ 1.98
SREBF1-216ENST00000490796 SMG6Q86US8 1419 aaKnown RBP27.41■■□□□ 1.98
SREBF1-216ENST00000490796 ZCRB1Q8TBF4 217 aaKnown RBP27.4■■□□□ 1.98
SREBF1-216ENST00000490796 SYTL4Q96C24 671 aaPredicted RBP27.4■■□□□ 1.98
SREBF1-216ENST00000490796 PDGFDQ9GZP0 370 aaPredicted RBP27.39■■□□□ 1.98
SREBF1-216ENST00000490796 ATF5Q9Y2D1 282 aaPredicted RBP27.39■■□□□ 1.98
SREBF1-216ENST00000490796 RAPGEF4Q8WZA2 1011 aa27.37■■□□□ 1.97
SREBF1-216ENST00000490796 BTAF1O14981 1849 aa27.36■■□□□ 1.97
SREBF1-216ENST00000490796 CASZ1Q86V15 1759 aa27.35■■□□□ 1.97
SREBF1-216ENST00000490796 NBPF6Q5VWK0 638 aa27.35■■□□□ 1.97
SREBF1-216ENST00000490796 NBPF4Q96M43 638 aa27.35■■□□□ 1.97
SREBF1-216ENST00000490796 PRIM1P49642 420 aaKnown RBP27.34■■□□□ 1.97
SREBF1-216ENST00000490796 USHBP1Q8N6Y0 703 aa27.34■■□□□ 1.97
SREBF1-216ENST00000490796 POLR3GLQ9BT43 218 aa27.34■■□□□ 1.97
SREBF1-216ENST00000490796 MTFR1LQ9H019 292 aa27.34■■□□□ 1.97
SREBF1-216ENST00000490796 CGNL1Q0VF96 1302 aa27.34■■□□□ 1.97
SREBF1-216ENST00000490796 SLC27A3Q5K4L6 730 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms